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RJR: Recommended Bibliography 26 Jun 2019 at 01:30 Created:

Reynolds Number

It is well known that relative size greatly affects *how*
organisms interact with the world. Less well known, at least among
biologists, is that at sufficiently small sizes, mechanical
interaction with the environment becomes difficult and then virtually
impossible. In fluid dynamics, an important dimensionless parameter is
the Reynolds Number (abbreviated *Re*), which is the ratio of
inertial to viscous forces affecting the movement of objects in a
fluid medium (or the movement of a fluid in a pipe). Since Re is
determined mainly by the size of the object (pipe) and the properties
(density and viscosity) of the fluid, organisms of different sizes
exhibit significantly different Re values when moving through air or
water. A fish, swimming at a high ratio of inertial to viscous forces,
gives a flick of its tail and then glides for several body lengths. A
bacterium, "swimming" in an environment dominated by viscosity,
possesses virtually no inertia. When the bacterium stops moving its
flagellum, the bacterium "coasts" for about a half of a microsecond,
coming to a stop in a distance less than a tenth the diameter of a
hydrogen atom. Similarly, the movement of molecules (nutrients toward,
wastes away) in the vicinity of a bacterium is dominated by diffusion.
Effective stirring — the generation of bulk flow through
mechanical means — is impossible at very low *Re*. An
understanding of the constraints imposed by life at low Reynolds
numbers is essentially for understanding the prokaryotic biosphere.

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Citations
The Papers
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RevDate: 2019-06-23

**Olfactory flow in the sturgeon is externally driven.**

*Comparative biochemistry and physiology. Part A, Molecular & integrative physiology* pii:S1095-6433(19)30182-5 [Epub ahead of print].

Fluid dynamics plays an important part in olfaction. Using the complementary techniques of dye visualisation and computational fluid dynamics (CFD), we investigated the hydrodynamics of the nasal region of the sturgeon Huso dauricus. H. dauricus offers several experimental advantages, including a well-developed, well-supported, radial array (rosette) of visible-by-eye olfactory sensory channels. We represented these features in an anatomically accurate rigid model derived from an X-ray scan of the head of a preserved museum specimen. We validated the results from the CFD simulation by comparing them with data from the dye visualisation experiments. We found that flow through both the nasal chamber and, crucially, the sensory channels could be induced by an external flow (caused by swimming in vivo) at a physiologically relevant Reynolds number. Flow through the nasal chamber arises from the anatomical arrangement of the incurrent and excurrent nostrils, and is assisted by the broad, cartilage-supported, inner wall of the incurrent nostril. Flow through the sensory channels arises when relatively high speed flow passing through the incurrent nostril encounters the circular central support of the olfactory rosette, decelerates, and is dispersed amongst the sensory channels. Vortices within the olfactory flow may assist odorant transport to the sensory surfaces. We conclude that swimming alone is sufficient to drive olfactory flow in H. dauricus, and consider the implications of our results for the three other extant genera of sturgeons (Acipenser, Pseudoscaphirhynchus and Scaphirhynchus), and for other fishes with olfactory rosettes.

Additional Links: PMID-31229600

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@article {pmid31229600,

year = {2019},

author = {Garwood, RJ and Behnsen, J and Haysom, HK and Hunt, JN and Dalby, LJ and Quilter, SK and Maclaine, JS and Cox, JPL},

title = {Olfactory flow in the sturgeon is externally driven.},

journal = {Comparative biochemistry and physiology. Part A, Molecular & integrative physiology},

volume = {},

number = {},

pages = {},

doi = {10.1016/j.cbpa.2019.06.013},

pmid = {31229600},

issn = {1531-4332},

abstract = {Fluid dynamics plays an important part in olfaction. Using the complementary techniques of dye visualisation and computational fluid dynamics (CFD), we investigated the hydrodynamics of the nasal region of the sturgeon Huso dauricus. H. dauricus offers several experimental advantages, including a well-developed, well-supported, radial array (rosette) of visible-by-eye olfactory sensory channels. We represented these features in an anatomically accurate rigid model derived from an X-ray scan of the head of a preserved museum specimen. We validated the results from the CFD simulation by comparing them with data from the dye visualisation experiments. We found that flow through both the nasal chamber and, crucially, the sensory channels could be induced by an external flow (caused by swimming in vivo) at a physiologically relevant Reynolds number. Flow through the nasal chamber arises from the anatomical arrangement of the incurrent and excurrent nostrils, and is assisted by the broad, cartilage-supported, inner wall of the incurrent nostril. Flow through the sensory channels arises when relatively high speed flow passing through the incurrent nostril encounters the circular central support of the olfactory rosette, decelerates, and is dispersed amongst the sensory channels. Vortices within the olfactory flow may assist odorant transport to the sensory surfaces. We conclude that swimming alone is sufficient to drive olfactory flow in H. dauricus, and consider the implications of our results for the three other extant genera of sturgeons (Acipenser, Pseudoscaphirhynchus and Scaphirhynchus), and for other fishes with olfactory rosettes.},

}

RevDate: 2019-06-19

**Morphological transitions of axially-driven microfilaments.**

*Soft matter* [Epub ahead of print].

The interactions of microtubules with motor proteins are ubiquitous in cellular and sub-cellular processes that involve motility and cargo transport. In vitro motility assays have demonstrated that motor-driven microtubules exhibit rich dynamical behaviors from straight to curved configurations. Here, we theoretically investigate the dynamic instabilities of elastic filaments, with free-ends, driven by single follower forces that emulate the action of molecular motors. Using the resistive force theory at low Reynolds number, and a combination of numerical techniques with linear stability analysis, we show the existence of four distinct regimes of filament behavior, including a novel buckled state with locked curvature. These successive instabilities recapitulate the full range of experimentally-observed microtubule behavior, implying that neither structural nor actuation asymmetry are needed to elicit this rich repertoire of motion.

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@article {pmid31215548,

year = {2019},

author = {Man, Y and Kanso, E},

title = {Morphological transitions of axially-driven microfilaments.},

journal = {Soft matter},

volume = {},

number = {},

pages = {},

doi = {10.1039/c8sm02397b},

pmid = {31215548},

issn = {1744-6848},

abstract = {The interactions of microtubules with motor proteins are ubiquitous in cellular and sub-cellular processes that involve motility and cargo transport. In vitro motility assays have demonstrated that motor-driven microtubules exhibit rich dynamical behaviors from straight to curved configurations. Here, we theoretically investigate the dynamic instabilities of elastic filaments, with free-ends, driven by single follower forces that emulate the action of molecular motors. Using the resistive force theory at low Reynolds number, and a combination of numerical techniques with linear stability analysis, we show the existence of four distinct regimes of filament behavior, including a novel buckled state with locked curvature. These successive instabilities recapitulate the full range of experimentally-observed microtubule behavior, implying that neither structural nor actuation asymmetry are needed to elicit this rich repertoire of motion.},

}

RevDate: 2019-06-19

**Orthogonal wavelet multiresolution analysis of the turbulent boundary layer measured with two-dimensional time-resolved particle image velocimetry.**

*Physical review. E*, **99(5-1):**053105.

The turbulent boundary layer flow measured by two-dimensional time-resolved particle image velocimetry is analyzed using the discrete orthogonal wavelet method. The Reynolds number of the turbulent boundary layer based on the friction velocity is Re_{τ}=235. The flow field is decomposed into a number of wavelet levels which have different characteristic scales. The velocity statistics and coherent structures at different wavelet levels are investigated. It is found that the fluctuation intensities and their peak locations differ for varying scales. The proper orthogonal decomposition (POD) of different wavelet components reveals a cascade of scales of coherent structures, especially the small-scale ones that are usually difficult to be identified in POD modes of the undecomposed flow field. The interactions among the scales are investigated in terms of large-scale amplitude modulations of the small-scale structures. In previous studies the velocity fluctuations are separated into two parts, the large scale and the small scale, divided usually by the boundary layer thickness. In the present study, however, the scales smaller than the boundary layer thickness are further separated. Therefore, the modulation analysis is a refined investigation that differentiates the modulation effects on separated small scales. The results reveal that the modulation effects vary among the small scales.

Additional Links: PMID-31212518

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@article {pmid31212518,

year = {2019},

author = {He, G and Wang, J and Rinoshika, A},

title = {Orthogonal wavelet multiresolution analysis of the turbulent boundary layer measured with two-dimensional time-resolved particle image velocimetry.},

journal = {Physical review. E},

volume = {99},

number = {5-1},

pages = {053105},

doi = {10.1103/PhysRevE.99.053105},

pmid = {31212518},

issn = {2470-0053},

abstract = {The turbulent boundary layer flow measured by two-dimensional time-resolved particle image velocimetry is analyzed using the discrete orthogonal wavelet method. The Reynolds number of the turbulent boundary layer based on the friction velocity is Re_{τ}=

235. The flow field is decomposed into a number of wavelet levels which have different characteristic scales. The velocity statistics and coherent structures at different wavelet levels are investigated. It is found that the fluctuation intensities and their peak locations differ for varying scales. The proper orthogonal decomposition (POD) of different wavelet components reveals a cascade of scales of coherent structures, especially the small-scale ones that are usually difficult to be identified in POD modes of the undecomposed flow field. The interactions among the scales are investigated in terms of large-scale amplitude modulations of the small-scale structures. In previous studies the velocity fluctuations are separated into two parts, the large scale and the small scale, divided usually by the boundary layer thickness. In the present study, however, the scales smaller than the boundary layer thickness are further separated. Therefore, the modulation analysis is a refined investigation that differentiates the modulation effects on separated small scales. The results reveal that the modulation effects vary among the small scales.},

}

RevDate: 2019-06-19

**Displacement field around a rigid sphere in a compressible elastic environment, corresponding higher-order Faxén relations, as well as higher-order displaceability and rotateability matrices.**

*Physical review. E*, **99(5-1):**053002.

An efficient route to the displacement field around a rigid spherical inclusion in an infinitely extended homogeneous elastic medium is presented in a slightly alternative way when compared to some common textbook methods. Moreover, two Faxén relations of next-higher order beyond the stresslet are calculated explicitly for compressible media. They quantify higher-order moments involving the force distribution on a rigid spherical particle in a deformed elastic medium. As a consequence, additional contributions to the distortions of the deformed elastic medium are identified that are absent to lower order. Furthermore, the displaceability and rotateability matrices for an ensemble of rigid spheres are calculated up to (including) sixth order in inverse particle separation distance. These matrices describe the interactions mediated between the rigid embedded particles by the elastic environment. In this way, additional coupling effects are identified that are absent to lower order, particularly when rotations and torques are involved. All methods and results can formally be transferred to the corresponding case of incompressible hydrodynamic low-Reynolds-number Stokes flow by considering the limit of an incompressible environment. The roles of compressibility of the embedding medium and of the here additionally derived higher-order contributions are highlighted by some selected example configurations.

Additional Links: PMID-31212497

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@article {pmid31212497,

year = {2019},

author = {Puljiz, M and Menzel, AM},

title = {Displacement field around a rigid sphere in a compressible elastic environment, corresponding higher-order Faxén relations, as well as higher-order displaceability and rotateability matrices.},

journal = {Physical review. E},

volume = {99},

number = {5-1},

pages = {053002},

doi = {10.1103/PhysRevE.99.053002},

pmid = {31212497},

issn = {2470-0053},

abstract = {An efficient route to the displacement field around a rigid spherical inclusion in an infinitely extended homogeneous elastic medium is presented in a slightly alternative way when compared to some common textbook methods. Moreover, two Faxén relations of next-higher order beyond the stresslet are calculated explicitly for compressible media. They quantify higher-order moments involving the force distribution on a rigid spherical particle in a deformed elastic medium. As a consequence, additional contributions to the distortions of the deformed elastic medium are identified that are absent to lower order. Furthermore, the displaceability and rotateability matrices for an ensemble of rigid spheres are calculated up to (including) sixth order in inverse particle separation distance. These matrices describe the interactions mediated between the rigid embedded particles by the elastic environment. In this way, additional coupling effects are identified that are absent to lower order, particularly when rotations and torques are involved. All methods and results can formally be transferred to the corresponding case of incompressible hydrodynamic low-Reynolds-number Stokes flow by considering the limit of an incompressible environment. The roles of compressibility of the embedding medium and of the here additionally derived higher-order contributions are highlighted by some selected example configurations.},

}

RevDate: 2019-06-19

**Discontinuity in the sedimentation system with two particles having different densities in a vertical channel.**

*Physical review. E*, **99(5-1):**053112.

The two-dimensional lattice Boltzmann method was used to numerically study a sedimentation system with two particles having different densities in a vertical channel for Galileo numbers in the range of 5≤Ga≤15 (resulting in a Reynolds number, based on the settling velocity, approximately ranging between 0.6 and 7). Two types of periodic motion, differing from each other in terms of the size of the limit cycle, the magnitude of the time period, and their changes upon increasing the density difference between particles, are identified depending on whether there is a wake effect. The most prominent features of this system are discontinuous changes in the settling velocity (6.7≤Ga<9.7) and time period of oscillation (10.5≤Ga≤15) at a critical value of the density difference between particles. The first discontinuity results in an abrupt increase in the Reynolds number, associated with a Hopf bifurcation without the presence of vortex shedding. The second discontinuity is accompanied by the disappearance of "abnormal rotation" (referring to the situation in which a particle appears to roll up a wall when settling) of the heavy particle, which directly results from a sharp increase in the amplitude of oscillation induced by the enhanced wake effect at another critical density difference between particles. The wall effects on these discontinuous changes were also examined.

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@article {pmid31212461,

year = {2019},

author = {Nie, D and Lin, J},

title = {Discontinuity in the sedimentation system with two particles having different densities in a vertical channel.},

journal = {Physical review. E},

volume = {99},

number = {5-1},

pages = {053112},

doi = {10.1103/PhysRevE.99.053112},

pmid = {31212461},

issn = {2470-0053},

abstract = {The two-dimensional lattice Boltzmann method was used to numerically study a sedimentation system with two particles having different densities in a vertical channel for Galileo numbers in the range of 5≤Ga≤15 (resulting in a Reynolds number, based on the settling velocity, approximately ranging between 0.6 and 7). Two types of periodic motion, differing from each other in terms of the size of the limit cycle, the magnitude of the time period, and their changes upon increasing the density difference between particles, are identified depending on whether there is a wake effect. The most prominent features of this system are discontinuous changes in the settling velocity (6.7≤Ga<9.7) and time period of oscillation (10.5≤Ga≤15) at a critical value of the density difference between particles. The first discontinuity results in an abrupt increase in the Reynolds number, associated with a Hopf bifurcation without the presence of vortex shedding. The second discontinuity is accompanied by the disappearance of "abnormal rotation" (referring to the situation in which a particle appears to roll up a wall when settling) of the heavy particle, which directly results from a sharp increase in the amplitude of oscillation induced by the enhanced wake effect at another critical density difference between particles. The wall effects on these discontinuous changes were also examined.},

}

RevDate: 2019-06-19

**Numerical simulation of flow over a parallel cantilevered flag in the vicinity of a rigid wall.**

*Physical review. E*, **99(5-1):**053111.

Flow over a parallel cantilevered flag in the vicinity of a rigid wall is numerically studied using an immersed boundary-lattice Boltzmann method (IB-LBM) in two-dimensional domain, where the dynamics of the fluid and structure are, respectively, solved by the LBM and a finite-element method (FEM), with a penalty IB to handle the fluid-structure interaction (FSI). Specifically, a benchmark case considering a plate attached to the downstream of a stationary cylinder is first conducted to validate the current solver. Then, the wall effects on the flag are systemically studied, considering the effects of off-wall distance, structure-to-fluid mass ratio, bending rigidity, and Reynolds number. Three flapping modes, including symmetrical flapping, asymmetrical flapping, and chaotic flapping, along with a steady state are observed in the simulations. It is found that the flag is vibrating or stable with a mean angle inclined in the fluid when it is mounted in the vicinity of a rigid wall. The mean inclined angle first increases in the steady state and then decreases in the unsteady state with the off-wall distance. In the unsteady regime, the dependency of the inclined angle on the off-wall distance is similar to that of the gradient of the fluid velocity. In addition, the rigid wall near the flag decreases the lift and drag generation and further stabilizes the flag-fluid system. Contrarily, the flag inertia destabilizes the flag, and large flag inertia induces chaotic vibrating modes.

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@article {pmid31212451,

year = {2019},

author = {Wang, L and Tian, FB},

title = {Numerical simulation of flow over a parallel cantilevered flag in the vicinity of a rigid wall.},

journal = {Physical review. E},

volume = {99},

number = {5-1},

pages = {053111},

doi = {10.1103/PhysRevE.99.053111},

pmid = {31212451},

issn = {2470-0053},

abstract = {Flow over a parallel cantilevered flag in the vicinity of a rigid wall is numerically studied using an immersed boundary-lattice Boltzmann method (IB-LBM) in two-dimensional domain, where the dynamics of the fluid and structure are, respectively, solved by the LBM and a finite-element method (FEM), with a penalty IB to handle the fluid-structure interaction (FSI). Specifically, a benchmark case considering a plate attached to the downstream of a stationary cylinder is first conducted to validate the current solver. Then, the wall effects on the flag are systemically studied, considering the effects of off-wall distance, structure-to-fluid mass ratio, bending rigidity, and Reynolds number. Three flapping modes, including symmetrical flapping, asymmetrical flapping, and chaotic flapping, along with a steady state are observed in the simulations. It is found that the flag is vibrating or stable with a mean angle inclined in the fluid when it is mounted in the vicinity of a rigid wall. The mean inclined angle first increases in the steady state and then decreases in the unsteady state with the off-wall distance. In the unsteady regime, the dependency of the inclined angle on the off-wall distance is similar to that of the gradient of the fluid velocity. In addition, the rigid wall near the flag decreases the lift and drag generation and further stabilizes the flag-fluid system. Contrarily, the flag inertia destabilizes the flag, and large flag inertia induces chaotic vibrating modes.},

}

RevDate: 2019-06-18

**Chaotic Micromixer Based on 3D Horseshoe Transformation.**

*Micromachines*, **10(6):** pii:mi10060398.

To improve the efficiency of mixing under laminar flow with a low Reynolds number (Re), a novel three-dimensional Horseshoe Transformation (3D HT) was proposed as the basis for the design of a micromixer. Compared with the classical HT, the Lyapunov exponent of the 3D HT, which was calculated based on a symbolic dynamic system, proved the chaotic enhancement. Based on the 3D HT, a micromixer with a mixing length of 12 mm containing six mixing units was obtained by sequentially applying "squeeze", "stretch", "twice fold", "inverse transformation", and "intersection" operations. Numerical simulation and Peclet Number (Pe) calculations indicated that when the squeeze amplitude 0 < α < 1/2, 0 < β < 1/2, the stretch amplitude γ > 4, and Re ≥ 1, the mass transfer in the mixer was dominated by convective diffusion induced by chaotic flow. When Re = 10, at the outlet of the mixing chamber, the simulated mixing index was 96.4%, which was far less than the value at Re = 0.1 (σ = 0.041). Microscope images of the mixing chamber and the curve trend of pH buffer solutions obtained from a mixing experiment were both consistent with the results of the simulation. When Re = 10, the average mixing index of the pH buffer solutions was 91.75%, which proved the excellent mixing efficiency of the mixer based on the 3D HT.

Additional Links: PMID-31207995

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@article {pmid31207995,

year = {2019},

author = {Zhang, H and Li, X and Chuai, R and Zhang, Y},

title = {Chaotic Micromixer Based on 3D Horseshoe Transformation.},

journal = {Micromachines},

volume = {10},

number = {6},

pages = {},

doi = {10.3390/mi10060398},

pmid = {31207995},

issn = {2072-666X},

support = {20180550950//Natural Science Foundation of Liaoning/ ; },

abstract = {To improve the efficiency of mixing under laminar flow with a low Reynolds number (Re), a novel three-dimensional Horseshoe Transformation (3D HT) was proposed as the basis for the design of a micromixer. Compared with the classical HT, the Lyapunov exponent of the 3D HT, which was calculated based on a symbolic dynamic system, proved the chaotic enhancement. Based on the 3D HT, a micromixer with a mixing length of 12 mm containing six mixing units was obtained by sequentially applying "squeeze", "stretch", "twice fold", "inverse transformation", and "intersection" operations. Numerical simulation and Peclet Number (Pe) calculations indicated that when the squeeze amplitude 0 < α < 1/2, 0 < β < 1/2, the stretch amplitude γ > 4, and Re ≥ 1, the mass transfer in the mixer was dominated by convective diffusion induced by chaotic flow. When Re = 10, at the outlet of the mixing chamber, the simulated mixing index was 96.4%, which was far less than the value at Re = 0.1 (σ = 0.041). Microscope images of the mixing chamber and the curve trend of pH buffer solutions obtained from a mixing experiment were both consistent with the results of the simulation. When Re = 10, the average mixing index of the pH buffer solutions was 91.75%, which proved the excellent mixing efficiency of the mixer based on the 3D HT.},

}

RevDate: 2019-06-17

**Indoor dispersion of airborne nano and fine particles: main factors affecting spatial and temporal distribution in the frame of exposure modelling.**

*Indoor air* [Epub ahead of print].

A particle exposure experiment inside a large climate-controlled chamber was conducted. Data on spatial and temporal distribution of nanoscale and fine aerosols in the range of mobility diameters 8 - 600 nm were collected with high resolution, for sodium chloride, fluorescein sodium and silica particles. Exposure scenarios studied, included constant and intermittent source emissions, different aggregation conditions, high (10 h-1) and low (3.5 h-1) air exchange rates (AERs) corresponding to chamber Reynolds number respectively equal to 1.105 and 3.104 . Results are presented and analysed to highlight the main determinants of exposure and to determine if the assumptions underlying two-box models hold under various scenarios. The main determinants of exposure found were the source generation rate and the ventilation rate. The effect of particles nature was indiscernible and the decrease of airborne total number concentrations attributable to surface deposition was estimated lower than 2% when the source was active. A near-field/far-field structure of aerosol concentration was always observed for the AER=10 h-1 but for AER=3.5 h-1 a single field structure was found. The particle size distribution was always homogeneous in space but a general shift of particles diameter (-8% to +16%) was observed between scenarios in correlation with the AER and with the source position, presumably largely attributable to aggregation. This article is protected by copyright. All rights reserved.

Additional Links: PMID-31206776

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@article {pmid31206776,

year = {2019},

author = {Belut, E and Sánchez Jiménez, A and Meyer-Plath, A and Koivisto, AJ and Koponen, IK and Jensen, ACØ and MacCalman, L and Tuinman, I and Fransman, W and Domat, M and Bivolarova, M and van Tongeren, M},

title = {Indoor dispersion of airborne nano and fine particles: main factors affecting spatial and temporal distribution in the frame of exposure modelling.},

journal = {Indoor air},

volume = {},

number = {},

pages = {},

doi = {10.1111/ina.12579},

pmid = {31206776},

issn = {1600-0668},

abstract = {A particle exposure experiment inside a large climate-controlled chamber was conducted. Data on spatial and temporal distribution of nanoscale and fine aerosols in the range of mobility diameters 8 - 600 nm were collected with high resolution, for sodium chloride, fluorescein sodium and silica particles. Exposure scenarios studied, included constant and intermittent source emissions, different aggregation conditions, high (10 h-1) and low (3.5 h-1) air exchange rates (AERs) corresponding to chamber Reynolds number respectively equal to 1.105 and 3.104 . Results are presented and analysed to highlight the main determinants of exposure and to determine if the assumptions underlying two-box models hold under various scenarios. The main determinants of exposure found were the source generation rate and the ventilation rate. The effect of particles nature was indiscernible and the decrease of airborne total number concentrations attributable to surface deposition was estimated lower than 2% when the source was active. A near-field/far-field structure of aerosol concentration was always observed for the AER=10 h-1 but for AER=3.5 h-1 a single field structure was found. The particle size distribution was always homogeneous in space but a general shift of particles diameter (-8% to +16%) was observed between scenarios in correlation with the AER and with the source position, presumably largely attributable to aggregation. This article is protected by copyright. All rights reserved.},

}

RevDate: 2019-06-12

**On the transport of particles/cells in high-throughput deterministic lateral displacement devices: Implications for circulating tumor cell separation.**

*Biomicrofluidics*, **13(3):**034112 pii:012903BMF.

Deterministic lateral displacement (DLD), which takes advantage of the asymmetric bifurcation of laminar flow around the embedded microposts, has shown promising capabilities in separating cells and particles of different sizes. Growing interest in utilizing high-throughput DLD devices for practical applications, such as circulating tumor cell separation, necessitates employing higher flow rates in these devices, leading to operating in moderate to high Reynolds number (Re) regimes. Despite extensive research on DLD devices in the creeping regime, limited research has focused on the physics of flow, critical size of the device, and deformable cell behavior in DLD devices at moderate to high Re. In this study, the transport behavior of particles/cells is investigated in realistic high-throughput DLD devices with hundreds of microposts by utilizing multiphysics modeling. A practical formula is proposed for the prediction of the device critical size, which could serve as a design guideline for high-throughput DLD devices. Then, the complex hydrodynamic interactions between a deformable cell and DLD post arrays are investigated. A dimensionless index is utilized for comparing different post designs to quantify the cell-post interaction. It is shown that the separation performances in high-throughput devices are highly affected by Re as well as the micropost shapes. These findings can be utilized for the design and optimization of high-throughput DLD microfluidic devices.

Additional Links: PMID-31186821

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@article {pmid31186821,

year = {2019},

author = {Aghilinejad, A and Aghaamoo, M and Chen, X},

title = {On the transport of particles/cells in high-throughput deterministic lateral displacement devices: Implications for circulating tumor cell separation.},

journal = {Biomicrofluidics},

volume = {13},

number = {3},

pages = {034112},

doi = {10.1063/1.5092718},

pmid = {31186821},

issn = {1932-1058},

abstract = {Deterministic lateral displacement (DLD), which takes advantage of the asymmetric bifurcation of laminar flow around the embedded microposts, has shown promising capabilities in separating cells and particles of different sizes. Growing interest in utilizing high-throughput DLD devices for practical applications, such as circulating tumor cell separation, necessitates employing higher flow rates in these devices, leading to operating in moderate to high Reynolds number (Re) regimes. Despite extensive research on DLD devices in the creeping regime, limited research has focused on the physics of flow, critical size of the device, and deformable cell behavior in DLD devices at moderate to high Re. In this study, the transport behavior of particles/cells is investigated in realistic high-throughput DLD devices with hundreds of microposts by utilizing multiphysics modeling. A practical formula is proposed for the prediction of the device critical size, which could serve as a design guideline for high-throughput DLD devices. Then, the complex hydrodynamic interactions between a deformable cell and DLD post arrays are investigated. A dimensionless index is utilized for comparing different post designs to quantify the cell-post interaction. It is shown that the separation performances in high-throughput devices are highly affected by Re as well as the micropost shapes. These findings can be utilized for the design and optimization of high-throughput DLD microfluidic devices.},

}

RevDate: 2019-06-11

**Physio-chemical effects of freshwaters on the dissolution of elementary mercury.**

*Environmental pollution (Barking, Essex : 1987)*, **252(Pt A):**627-636 pii:S0269-7491(19)30920-0 [Epub ahead of print].

Elemental mercury (Hg0) is widely used by Artisanal and small-scale gold miners (ASGMs) to extract gold from ore. Due to the unavailability of appropriate waste disposal facilities, Hg0-rich amalgamation tailings are often discharged into nearby aquatic systems where the Hg0 droplets settle in bottom sediment and sediment-water interfaces. Hg0 dissolution and following biogeochemical transformations to methylmercury (MeHg) have been concerned owing to its potential risk to human health and the ecosystem. For reliable estimates of Hg exposure to human bodies using pollutant environmental fate and transport models, knowledge of the Hg0 dissolution rate is important. However, only limited literature is available. Therefore, it was investigated in this study. Dissolution tests in a 'dark chamber' revealed that an increase in medium pH resulted in a decrease in the dissolution rate, whereas, a large Hg0 droplet surface area (SA) and high Reynolds number (Re) resulted in a faster dissolution. A multivariate first order dissolution model of the form:kˆ=-7.9×10-5[pH]+7.0×10-4[logRe]+7.9×10-4[SA]-2.5×10-3 was proposed (adjusted R2 = 0.99). The Breusch-Pagan and White heteroscedasticity tests revealed that the model residuals are homoscedastic (p-value = 0.05) at the 5% significance level. Parameter sensitivity analysis suggests that slow mercury dissolution from the Hg0 droplets to aquatic systems might mask emerging environmental risk of mercury. Even after mercury usage in ASGM is banned, mercury dissolution and following contamination will continue for about 40 years or longer owing to previously discharged Hg0 droplets.

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@article {pmid31185351,

year = {2019},

author = {Tshumah-Mutingwende, RRMS and Takahashi, F},

title = {Physio-chemical effects of freshwaters on the dissolution of elementary mercury.},

journal = {Environmental pollution (Barking, Essex : 1987)},

volume = {252},

number = {Pt A},

pages = {627-636},

doi = {10.1016/j.envpol.2019.05.130},

pmid = {31185351},

issn = {1873-6424},

abstract = {Elemental mercury (Hg0) is widely used by Artisanal and small-scale gold miners (ASGMs) to extract gold from ore. Due to the unavailability of appropriate waste disposal facilities, Hg0-rich amalgamation tailings are often discharged into nearby aquatic systems where the Hg0 droplets settle in bottom sediment and sediment-water interfaces. Hg0 dissolution and following biogeochemical transformations to methylmercury (MeHg) have been concerned owing to its potential risk to human health and the ecosystem. For reliable estimates of Hg exposure to human bodies using pollutant environmental fate and transport models, knowledge of the Hg0 dissolution rate is important. However, only limited literature is available. Therefore, it was investigated in this study. Dissolution tests in a 'dark chamber' revealed that an increase in medium pH resulted in a decrease in the dissolution rate, whereas, a large Hg0 droplet surface area (SA) and high Reynolds number (Re) resulted in a faster dissolution. A multivariate first order dissolution model of the form:kˆ=-7.9×10-5[pH]+7.0×10-4[logRe]+7.9×10-4[SA]-2.5×10-3 was proposed (adjusted R2 = 0.99). The Breusch-Pagan and White heteroscedasticity tests revealed that the model residuals are homoscedastic (p-value = 0.05) at the 5% significance level. Parameter sensitivity analysis suggests that slow mercury dissolution from the Hg0 droplets to aquatic systems might mask emerging environmental risk of mercury. Even after mercury usage in ASGM is banned, mercury dissolution and following contamination will continue for about 40 years or longer owing to previously discharged Hg0 droplets.},

}

RevDate: 2019-06-09

**Droplet impact: Viscosity and wettability effects on splashing.**

*Journal of colloid and interface science*, **553:**22-30 pii:S0021-9797(19)30665-4 [Epub ahead of print].

HYPOTHESES: The wettability of a surface affects the splashing behavior of a droplet upon impact onto a surface only when surface exhibits either a very high or a very low contact angle. Viscosity affects the splashing threshold in a non-monotony way.

EXPERIMENTS: To examine the roles of drop viscosity and surface wettability on splashing, a wide range of liquid viscosities (1-100 cSt), surface wettabilities (from hydrophilic to hydrophobic), drop velocities (0.5-3.3 m/s), and liquid surface tensions (∼20 and 70 mN/m) were examined. High speed imaging was used.

FINDINGS: Wettability affects the splashing threshold at very extreme limits of the wettability i.e. at very high or very low contact angle values; however, the wettability effect is less prominent on spreading-splashing regime map. For drops of any surface tension impacting surfaces with any wettability, an increase in viscosity (up to ∼5 cSt or Reynolds number of 2000) promotes splashing; whereas using liquids with viscosities larger than 5 cSt, suppress splashing. We explained such behaviors using evolution of the lamella rim, dynamic contact angle, and velocity of the expanding lamella. Finally, to predict the splashing, we developed a general empirical relationship which explains all of ours, and previously reported data.

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@article {pmid31176976,

year = {2019},

author = {Almohammadi, H and Amirfazli, A},

title = {Droplet impact: Viscosity and wettability effects on splashing.},

journal = {Journal of colloid and interface science},

volume = {553},

number = {},

pages = {22-30},

doi = {10.1016/j.jcis.2019.05.101},

pmid = {31176976},

issn = {1095-7103},

abstract = {HYPOTHESES: The wettability of a surface affects the splashing behavior of a droplet upon impact onto a surface only when surface exhibits either a very high or a very low contact angle. Viscosity affects the splashing threshold in a non-monotony way.

EXPERIMENTS: To examine the roles of drop viscosity and surface wettability on splashing, a wide range of liquid viscosities (1-100 cSt), surface wettabilities (from hydrophilic to hydrophobic), drop velocities (0.5-3.3 m/s), and liquid surface tensions (∼20 and 70 mN/m) were examined. High speed imaging was used.

FINDINGS: Wettability affects the splashing threshold at very extreme limits of the wettability i.e. at very high or very low contact angle values; however, the wettability effect is less prominent on spreading-splashing regime map. For drops of any surface tension impacting surfaces with any wettability, an increase in viscosity (up to ∼5 cSt or Reynolds number of 2000) promotes splashing; whereas using liquids with viscosities larger than 5 cSt, suppress splashing. We explained such behaviors using evolution of the lamella rim, dynamic contact angle, and velocity of the expanding lamella. Finally, to predict the splashing, we developed a general empirical relationship which explains all of ours, and previously reported data.},

}

RevDate: 2019-06-06

**A New Theoretical Approach of Wall Transpiration in the Cavity Flow of the Ferrofluids.**

*Micromachines*, **10(6):** pii:mi10060373.

An idea of permeable (suction/injection) chamber is proposed in the current work to control the secondary vortices appearing in the well-known lid-driven cavity flow by means of the water based ferrofluids. The Rosensweig model is conveniently adopted for the mathematical analysis of the physical problem. The governing equation of model is first transformed into the vorticity transport equation. A special finite difference method in association with the successive over-relaxation method (SOR) is then employed to numerically simulate the flow behavior. The effects of intensity of magnetic source (controlled by the Stuart number), aspect ratio of the cavity, rate of permeability (i.e., α p = V 0 U), ratio of speed of suction/injection V 0 to the sliding-speed U of the upper wall of a cavity, and Reynolds number on the ferrofluid in the cavity are fully examined. It is found that the secondary vortices residing on the lower wall of the cavity are dissolved by the implementation of the suction/injection chamber. Their character is dependent on the rate of permeability. The intensity of magnetic source affects the system in such a way to alter the flow and to transport the fluid away from the magnetic source location. It also reduces the loading effects on the walls of the cavity. If the depth of cavity (or the aspect ratio) is increased, the secondary vortices join together to form a single secondary vortex. The number of secondary vortices is shown to increase if the Reynolds number is increased for both the clear fluid as well as the ferrofluids. The suction and injection create resistance in settlement of solid ferroparticles on the bottom. The results obtained are validated with the existing data in the literature and satisfactory agreement is observed. The presented problem may find applications in biomedical, pharmaceutical, and engineering industries.

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@article {pmid31167483,

year = {2019},

author = {Siddiqui, AA and Turkyilmazoglu, M},

title = {A New Theoretical Approach of Wall Transpiration in the Cavity Flow of the Ferrofluids.},

journal = {Micromachines},

volume = {10},

number = {6},

pages = {},

doi = {10.3390/mi10060373},

pmid = {31167483},

issn = {2072-666X},

abstract = {An idea of permeable (suction/injection) chamber is proposed in the current work to control the secondary vortices appearing in the well-known lid-driven cavity flow by means of the water based ferrofluids. The Rosensweig model is conveniently adopted for the mathematical analysis of the physical problem. The governing equation of model is first transformed into the vorticity transport equation. A special finite difference method in association with the successive over-relaxation method (SOR) is then employed to numerically simulate the flow behavior. The effects of intensity of magnetic source (controlled by the Stuart number), aspect ratio of the cavity, rate of permeability (i.e., α p = V 0 U), ratio of speed of suction/injection V 0 to the sliding-speed U of the upper wall of a cavity, and Reynolds number on the ferrofluid in the cavity are fully examined. It is found that the secondary vortices residing on the lower wall of the cavity are dissolved by the implementation of the suction/injection chamber. Their character is dependent on the rate of permeability. The intensity of magnetic source affects the system in such a way to alter the flow and to transport the fluid away from the magnetic source location. It also reduces the loading effects on the walls of the cavity. If the depth of cavity (or the aspect ratio) is increased, the secondary vortices join together to form a single secondary vortex. The number of secondary vortices is shown to increase if the Reynolds number is increased for both the clear fluid as well as the ferrofluids. The suction and injection create resistance in settlement of solid ferroparticles on the bottom. The results obtained are validated with the existing data in the literature and satisfactory agreement is observed. The presented problem may find applications in biomedical, pharmaceutical, and engineering industries.},

}

RevDate: 2019-06-05

**Vortex Shedding Optical Flowmeter based on Photonic Crystal Fiber.**

*Scientific reports*, **9(1):**8313 pii:10.1038/s41598-019-40464-2.

In the present work we propose a PCF (photonic crystal fiber) based Modal interferometer detector for sensing low flow velocity by detecting the frequency of vortices shed from a bluff body. The proposed novel design encapsulates the interferometric arm inside a metal casing to protect the sensor from harsh process fluids. The characterization of the developed probe is conducted under no flow conditions using a piezo actuator to evaluate the sensor response over wide frequency range (0-500 Hz). The developed sensors shows a reasonably flat response in the tested frequency range. Experiments are conducted by employing the developed sensor behind a bluff body of a vortex flowmeter to measure the frequency of the shed vortices and hence, the fluid flow rate. The low flow rate sensitivity of the vortex flowmeter is improved many folds by using the present sensor and the minimum Reynolds number detected is Re = 5000. A linear trend is observed between the frequency of the vortices and the flow velocity which is desirable for fluid flow measurement. The PCF based interferometric sensor with metal encapsulation makes the vortex flowmeter, sensitive at low flow rates, robust and economical to be used in industrial application.

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@article {pmid31165744,

year = {2019},

author = {Arumuru, V and Dash, JN and Dora, D and Jha, R},

title = {Vortex Shedding Optical Flowmeter based on Photonic Crystal Fiber.},

journal = {Scientific reports},

volume = {9},

number = {1},

pages = {8313},

doi = {10.1038/s41598-019-40464-2},

pmid = {31165744},

issn = {2045-2322},

abstract = {In the present work we propose a PCF (photonic crystal fiber) based Modal interferometer detector for sensing low flow velocity by detecting the frequency of vortices shed from a bluff body. The proposed novel design encapsulates the interferometric arm inside a metal casing to protect the sensor from harsh process fluids. The characterization of the developed probe is conducted under no flow conditions using a piezo actuator to evaluate the sensor response over wide frequency range (0-500 Hz). The developed sensors shows a reasonably flat response in the tested frequency range. Experiments are conducted by employing the developed sensor behind a bluff body of a vortex flowmeter to measure the frequency of the shed vortices and hence, the fluid flow rate. The low flow rate sensitivity of the vortex flowmeter is improved many folds by using the present sensor and the minimum Reynolds number detected is Re = 5000. A linear trend is observed between the frequency of the vortices and the flow velocity which is desirable for fluid flow measurement. The PCF based interferometric sensor with metal encapsulation makes the vortex flowmeter, sensitive at low flow rates, robust and economical to be used in industrial application.},

}

RevDate: 2019-06-02

**Acoustically driven oscillatory flow fields in a cylindrical resonator at resonance.**

*The Journal of the Acoustical Society of America*, **145(5):**2932.

Generation and development of acoustic waves in an air-filled cylindrical resonator driven by a conical electro-mechanical speaker are studied experimentally and simulated numerically. The driving frequencies of the speaker are chosen such that a standing wave field is produced at each chosen frequency in the resonator. The amplitude of the generated acoustic (pressure) waves is measured along the axis of the resonator by a fast response piezo-resistive pressure transducer, while the radial distribution of the oscillatory axial velocities is measured at the corresponding velocity anti-node locations by a constant temperature hot-film anemometer. For the cases studied, the acoustic Reynolds number ranged between 20.0 and 60.0 and the flow fields were always found to be in the laminar regime. The flow field in the resonator is also simulated by a high-fidelity numerical scheme with low numerical diffusion. Formation of the standing wave and quasi-steady acoustic streaming are numerically simulated by solving the fully compressible form of the Navier-Stokes equations. The effects of the sound field intensity (i.e., input power to the speaker) and driving frequency on the standing wave field and the resultant formation process of the streaming structures are also investigated.

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@article {pmid31153354,

year = {2019},

author = {Farouk, B and Antao, DS and Hasan, N},

title = {Acoustically driven oscillatory flow fields in a cylindrical resonator at resonance.},

journal = {The Journal of the Acoustical Society of America},

volume = {145},

number = {5},

pages = {2932},

doi = {10.1121/1.5097594},

pmid = {31153354},

issn = {1520-8524},

abstract = {Generation and development of acoustic waves in an air-filled cylindrical resonator driven by a conical electro-mechanical speaker are studied experimentally and simulated numerically. The driving frequencies of the speaker are chosen such that a standing wave field is produced at each chosen frequency in the resonator. The amplitude of the generated acoustic (pressure) waves is measured along the axis of the resonator by a fast response piezo-resistive pressure transducer, while the radial distribution of the oscillatory axial velocities is measured at the corresponding velocity anti-node locations by a constant temperature hot-film anemometer. For the cases studied, the acoustic Reynolds number ranged between 20.0 and 60.0 and the flow fields were always found to be in the laminar regime. The flow field in the resonator is also simulated by a high-fidelity numerical scheme with low numerical diffusion. Formation of the standing wave and quasi-steady acoustic streaming are numerically simulated by solving the fully compressible form of the Navier-Stokes equations. The effects of the sound field intensity (i.e., input power to the speaker) and driving frequency on the standing wave field and the resultant formation process of the streaming structures are also investigated.},

}

RevDate: 2019-05-31

**Linear Response Theory for One-Point Statistics in the Inertial Sublayer of Wall-Bounded Turbulence.**

*Physical review letters*, **122(19):**194502.

The idea of linear response theory well known in the statistical mechanics for thermal equilibrium systems is applied to one-point statistics in the inertial sublayer of wall-bounded turbulence (WBT). A close analogy between the energy transfer from large to small scales in isotropic turbulence and the momentum transfer in the wall normal direction in WBT plays a key role in the application. The application gives estimates of the influence of the finite Reynolds number on the statistics. The estimates are consistent with data by high-resolution direct numerical simulations of turbulent channel flow.

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@article {pmid31144946,

year = {2019},

author = {Kaneda, Y and Yamamoto, Y and Tsuji, Y},

title = {Linear Response Theory for One-Point Statistics in the Inertial Sublayer of Wall-Bounded Turbulence.},

journal = {Physical review letters},

volume = {122},

number = {19},

pages = {194502},

doi = {10.1103/PhysRevLett.122.194502},

pmid = {31144946},

issn = {1079-7114},

abstract = {The idea of linear response theory well known in the statistical mechanics for thermal equilibrium systems is applied to one-point statistics in the inertial sublayer of wall-bounded turbulence (WBT). A close analogy between the energy transfer from large to small scales in isotropic turbulence and the momentum transfer in the wall normal direction in WBT plays a key role in the application. The application gives estimates of the influence of the finite Reynolds number on the statistics. The estimates are consistent with data by high-resolution direct numerical simulations of turbulent channel flow.},

}

RevDate: 2019-05-29

**A new electrochemical cell with a uniformly accessible electrode to study fast catalytic reactions.**

*Physical chemistry chemical physics : PCCP* [Epub ahead of print].

The electrochemical study of fast catalytic reactions is limited by mass transport when using the conventional electrochemical cell with a rotating disk electrode (RDE). To overcome this issue, it is important to find a new device with improved transport properties that respects electrochemical constraints. We used numerical simulations of computational fluid dynamics to design a new electrochemical cell based on the so-called "jet flow" design for the kinetic studies of catalytic chemical reactions at the surface of an electrode. The new cell is characterized by a high, reliable and uniform mass transport over the electroactive part of its surface. We investigated the effects of the nozzle and the electrode diameters, the nozzle-electrode distance and the Reynolds number on the performance of the jet-electrode in the flow system. Through the optimization of the geometry of this jet electrode cell, we achieved a factor of 3 enhancement in transport compared to the rotating disk electrode. We succeeded in constructing the designed electrode, characterized it with electrochemical techniques, and found an excellent agreement between the transport properties deduced from the numerical simulations and those from the measurements.

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@article {pmid31140495,

year = {2019},

author = {Fadel, M and Daurelle, JV and Fourmond, V and Vicente, J},

title = {A new electrochemical cell with a uniformly accessible electrode to study fast catalytic reactions.},

journal = {Physical chemistry chemical physics : PCCP},

volume = {},

number = {},

pages = {},

doi = {10.1039/c9cp01487j},

pmid = {31140495},

issn = {1463-9084},

abstract = {The electrochemical study of fast catalytic reactions is limited by mass transport when using the conventional electrochemical cell with a rotating disk electrode (RDE). To overcome this issue, it is important to find a new device with improved transport properties that respects electrochemical constraints. We used numerical simulations of computational fluid dynamics to design a new electrochemical cell based on the so-called "jet flow" design for the kinetic studies of catalytic chemical reactions at the surface of an electrode. The new cell is characterized by a high, reliable and uniform mass transport over the electroactive part of its surface. We investigated the effects of the nozzle and the electrode diameters, the nozzle-electrode distance and the Reynolds number on the performance of the jet-electrode in the flow system. Through the optimization of the geometry of this jet electrode cell, we achieved a factor of 3 enhancement in transport compared to the rotating disk electrode. We succeeded in constructing the designed electrode, characterized it with electrochemical techniques, and found an excellent agreement between the transport properties deduced from the numerical simulations and those from the measurements.},

}

RevDate: 2019-06-05

**Atomistic insights into cesium chloride solution transport through the ultra-confined calcium-silicate-hydrate channel.**

*Physical chemistry chemical physics : PCCP*, **21(22):**11892-11902.

The transport of water and ions in the gel pores of calcium silicate hydrate (C-S-H) determines the durability of cement material. In this study, molecular dynamics was employed to investigate the capillary imbibition process of CsCl solution in the C-S-H channel. The advanced frontier of CsCl solution flow inside the C-S-H capillary shows a concave meniscus shape, which reflects the hydrophilic properties of the C-S-H substrate. Reynolds number calculations show that the transport process is laminar flow and dominated by viscous forces. The invading depth of the CsCl solution deviates from the theoretical prediction of the classic Lucas-Washburn (L-W) equation, but the modified theoretical equation, by incorporating the effect of slip length, dynamic contact angle, and effective viscosity into the L-W equation, can describe the penetration curve of the solution very well. The validity of our developed theoretical equation was confirmed by additional systems with different ion concentrations. In addition, the local structure of ions was analyzed to elucidate the effect of ion concentration on the transport process. The adsorption and accumulation of ions retard the transport process of water. With an increase in the ionic concentration, the effects of immobilization and cluster accumulation became more pronounced, further reducing the transport rate of water. This study provides fundamental insight into the transport behavior of liquid in the gel pores of cement-based material.

Additional Links: PMID-31123743

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@article {pmid31123743,

year = {2019},

author = {Wang, P and Zhang, Q and Wang, M and Yin, B and Hou, D and Zhang, Y},

title = {Atomistic insights into cesium chloride solution transport through the ultra-confined calcium-silicate-hydrate channel.},

journal = {Physical chemistry chemical physics : PCCP},

volume = {21},

number = {22},

pages = {11892-11902},

doi = {10.1039/c8cp07676f},

pmid = {31123743},

issn = {1463-9084},

abstract = {The transport of water and ions in the gel pores of calcium silicate hydrate (C-S-H) determines the durability of cement material. In this study, molecular dynamics was employed to investigate the capillary imbibition process of CsCl solution in the C-S-H channel. The advanced frontier of CsCl solution flow inside the C-S-H capillary shows a concave meniscus shape, which reflects the hydrophilic properties of the C-S-H substrate. Reynolds number calculations show that the transport process is laminar flow and dominated by viscous forces. The invading depth of the CsCl solution deviates from the theoretical prediction of the classic Lucas-Washburn (L-W) equation, but the modified theoretical equation, by incorporating the effect of slip length, dynamic contact angle, and effective viscosity into the L-W equation, can describe the penetration curve of the solution very well. The validity of our developed theoretical equation was confirmed by additional systems with different ion concentrations. In addition, the local structure of ions was analyzed to elucidate the effect of ion concentration on the transport process. The adsorption and accumulation of ions retard the transport process of water. With an increase in the ionic concentration, the effects of immobilization and cluster accumulation became more pronounced, further reducing the transport rate of water. This study provides fundamental insight into the transport behavior of liquid in the gel pores of cement-based material.},

}

RevDate: 2019-05-31

**Numerical Study of Droplet Dynamics on a Solid Surface with Insoluble Surfactants.**

*Langmuir : the ACS journal of surfaces and colloids* [Epub ahead of print].

Surfactants are widely used in many industrial processes, where the presence of surfactants not only reduces the interfacial tension between fluids but also alters the wetting properties of solid surfaces. To understand how the surfactants influence the droplet motion on a solid surface, a hybrid method for interfacial flows with insoluble surfactants and contact-line dynamics is developed. This method solves immiscible two-phase flows through a lattice Boltzmann color-gradient model and simultaneously solves the convection-diffusion equation for surfactant concentration through a finite difference method. In addition, a dynamic contact angle formulation that describes the dependence of the local contact angle on the surfactant concentration is derived, and the resulting contact angle is enforced by a geometrical wetting condition. Our method is first used to simulate static contact angles for a droplet resting on a solid surface, and the results show that the presence of surfactants can significantly modify surface wettability, especially when the surface is more hydrophilic or more hydrophobic. This is then applied to simulate a surfactant-laden droplet moving on a substrate subject to a linear shear flow for varying effective capillary number (Cae), Reynolds number (Re), and surface wettability, where the results are often compared with those of a clean droplet. For varying Cae, the simulations are conducted by considering a neutral surface. At low values of Cae, the droplet eventually reaches a steady deformation and moves at a constant velocity. In either a clean or surfactant-laden case, the moving velocity of the droplet linearly increases with the moving wall velocity, but the slope is always higher (i.e., the droplet moves faster) in the surfactant-laden case where the droplet exhibits a bigger deformation. When Cae is increased beyond a critical value (Cae,c), the droplet breakup would happen. The presence of surfactants is found to decrease the value of Cae,c, but it shows a non-monotonic effect on the droplet breakup. An increase in Re is able to increase not only droplet deformation but also surfactant dilution. The role of surfactants in the droplet behavior is found to greatly depend upon the surface wettability. For a hydrophilic surface, the presence of surfactants can decrease the wetting length and enables the droplet to reach a steady state faster; while for a hydrophobic surface, it increases the wetting length and delays the departure of the droplet from the solid surface.

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@article {pmid31120757,

year = {2019},

author = {Zhang, J and Liu, H and Ba, Y},

title = {Numerical Study of Droplet Dynamics on a Solid Surface with Insoluble Surfactants.},

journal = {Langmuir : the ACS journal of surfaces and colloids},

volume = {},

number = {},

pages = {},

doi = {10.1021/acs.langmuir.9b00495},

pmid = {31120757},

issn = {1520-5827},

abstract = {Surfactants are widely used in many industrial processes, where the presence of surfactants not only reduces the interfacial tension between fluids but also alters the wetting properties of solid surfaces. To understand how the surfactants influence the droplet motion on a solid surface, a hybrid method for interfacial flows with insoluble surfactants and contact-line dynamics is developed. This method solves immiscible two-phase flows through a lattice Boltzmann color-gradient model and simultaneously solves the convection-diffusion equation for surfactant concentration through a finite difference method. In addition, a dynamic contact angle formulation that describes the dependence of the local contact angle on the surfactant concentration is derived, and the resulting contact angle is enforced by a geometrical wetting condition. Our method is first used to simulate static contact angles for a droplet resting on a solid surface, and the results show that the presence of surfactants can significantly modify surface wettability, especially when the surface is more hydrophilic or more hydrophobic. This is then applied to simulate a surfactant-laden droplet moving on a substrate subject to a linear shear flow for varying effective capillary number (Cae), Reynolds number (Re), and surface wettability, where the results are often compared with those of a clean droplet. For varying Cae, the simulations are conducted by considering a neutral surface. At low values of Cae, the droplet eventually reaches a steady deformation and moves at a constant velocity. In either a clean or surfactant-laden case, the moving velocity of the droplet linearly increases with the moving wall velocity, but the slope is always higher (i.e., the droplet moves faster) in the surfactant-laden case where the droplet exhibits a bigger deformation. When Cae is increased beyond a critical value (Cae,c), the droplet breakup would happen. The presence of surfactants is found to decrease the value of Cae,c, but it shows a non-monotonic effect on the droplet breakup. An increase in Re is able to increase not only droplet deformation but also surfactant dilution. The role of surfactants in the droplet behavior is found to greatly depend upon the surface wettability. For a hydrophilic surface, the presence of surfactants can decrease the wetting length and enables the droplet to reach a steady state faster; while for a hydrophobic surface, it increases the wetting length and delays the departure of the droplet from the solid surface.},

}

RevDate: 2019-06-10

**In Situ Grafting Hydrophilic Polymeric Layer for Stable Drag Reduction.**

*Langmuir : the ACS journal of surfaces and colloids*, **35(22):**7205-7211.

Developing drag reduction techniques has attracted great attention because of their need in practical applications. However, many of the proposed strategies exhibit some inevitable limitations, especially for long period of adhibition. In this work, the dynamic but stable drag reduction effect of superhydrophilic hydrogel-coated iron sphere falling freely in a cylindrical water tank was investigated. The absolute instantaneous velocities and displacements of either the hydrogel-encapsulated or unmodified iron sphere falling freely in water were monitored via a high-speed video. It was revealed that, in the range of Reynolds number from 104 to 106, the optimized hydrogel-coated iron sphere with uniform stability could reduce the resistance by up to 40%, which was mainly due to the boundary slip of water and the delayed boundary separation that resulted from the coated hydrogel. Besides, the deliberate experiments and analysis further indicated that the superhydrophilic hydrogel layer accompanied by the emergence of the drag crisis has largely effected the distribution of flow field at the boundary around the sphere. More importantly, the drag reduction behavior based on the proposed method was thermodynamically stable and resistant to external stimulus, including fluidic oscillator and hydrodynamic pressure. The effective long-term drag reduction performance of the hydrophilic substrate can be expected, correspondingly, and also provides a novel preliminary protocol and avenues for the development of durable drag reduction technologies.

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@article {pmid31083953,

year = {2019},

author = {Tian, C and Wang, X and Liu, Y and Yang, W and Hu, H and Pei, X and Zhou, F},

title = {In Situ Grafting Hydrophilic Polymeric Layer for Stable Drag Reduction.},

journal = {Langmuir : the ACS journal of surfaces and colloids},

volume = {35},

number = {22},

pages = {7205-7211},

doi = {10.1021/acs.langmuir.9b00321},

pmid = {31083953},

issn = {1520-5827},

abstract = {Developing drag reduction techniques has attracted great attention because of their need in practical applications. However, many of the proposed strategies exhibit some inevitable limitations, especially for long period of adhibition. In this work, the dynamic but stable drag reduction effect of superhydrophilic hydrogel-coated iron sphere falling freely in a cylindrical water tank was investigated. The absolute instantaneous velocities and displacements of either the hydrogel-encapsulated or unmodified iron sphere falling freely in water were monitored via a high-speed video. It was revealed that, in the range of Reynolds number from 104 to 106, the optimized hydrogel-coated iron sphere with uniform stability could reduce the resistance by up to 40%, which was mainly due to the boundary slip of water and the delayed boundary separation that resulted from the coated hydrogel. Besides, the deliberate experiments and analysis further indicated that the superhydrophilic hydrogel layer accompanied by the emergence of the drag crisis has largely effected the distribution of flow field at the boundary around the sphere. More importantly, the drag reduction behavior based on the proposed method was thermodynamically stable and resistant to external stimulus, including fluidic oscillator and hydrodynamic pressure. The effective long-term drag reduction performance of the hydrophilic substrate can be expected, correspondingly, and also provides a novel preliminary protocol and avenues for the development of durable drag reduction technologies.},

}

RevDate: 2019-05-14

**Experimental and Numerical Investigations on the Flow Characteristics within Hydrodynamic Entrance Regions in Microchannels.**

*Micromachines*, **10(5):** pii:mi10050317.

Flow characteristics within entrance regions in microchannels are important due to their effect on heat and mass transfer. However, relevant research is limited and some conclusions are controversial. In order to reveal flow characteristics within entrance regions and to provide empiric correlation estimating hydrodynamic entrance length, experimental and numerical investigations were conducted in microchannels with square cross-sections. The inlet configuration was elaborately designed in a more common pattern for microdevices to diminish errors caused by separation flow near the inlet and fabrication faults so that conclusions which were more applicable to microchannels could be drawn. Three different microchannels with hydraulic diameters of 100 μm, 150 μm, and 200 μm were investigated with Reynolds (Re) number ranging from 0.5 to 50. For the experiment, deionized water was chosen as the working fluid and microscopic particle image velocimetry (micro-PIV) was adopted to record and analyze velocity profiles. For numerical simulation, the test-sections were modeled and incompressible laminar Navier-Stokes equations were solved with commercial software. Strong agreement was achieved between the experimental data and the simulated data. According to the results of both the experiments and the simulations, new correlations were proposed to estimate entrance length. Re numbers ranging from 12.5 to 15 was considered as the transition region where the relationship between entrance length and Re number converted. For the microchannels and the Reynolds number range investigated compared with correlations for conventional channels, noticeable deviation was observed for lower Re numbers (Re < 12.5) and strong agreement was found for higher Re numbers (Re > 15).

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@article {pmid31083496,

year = {2019},

author = {Li, H and Huang, B and Wu, M},

title = {Experimental and Numerical Investigations on the Flow Characteristics within Hydrodynamic Entrance Regions in Microchannels.},

journal = {Micromachines},

volume = {10},

number = {5},

pages = {},

doi = {10.3390/mi10050317},

pmid = {31083496},

issn = {2072-666X},

abstract = {Flow characteristics within entrance regions in microchannels are important due to their effect on heat and mass transfer. However, relevant research is limited and some conclusions are controversial. In order to reveal flow characteristics within entrance regions and to provide empiric correlation estimating hydrodynamic entrance length, experimental and numerical investigations were conducted in microchannels with square cross-sections. The inlet configuration was elaborately designed in a more common pattern for microdevices to diminish errors caused by separation flow near the inlet and fabrication faults so that conclusions which were more applicable to microchannels could be drawn. Three different microchannels with hydraulic diameters of 100 μm, 150 μm, and 200 μm were investigated with Reynolds (Re) number ranging from 0.5 to 50. For the experiment, deionized water was chosen as the working fluid and microscopic particle image velocimetry (micro-PIV) was adopted to record and analyze velocity profiles. For numerical simulation, the test-sections were modeled and incompressible laminar Navier-Stokes equations were solved with commercial software. Strong agreement was achieved between the experimental data and the simulated data. According to the results of both the experiments and the simulations, new correlations were proposed to estimate entrance length. Re numbers ranging from 12.5 to 15 was considered as the transition region where the relationship between entrance length and Re number converted. For the microchannels and the Reynolds number range investigated compared with correlations for conventional channels, noticeable deviation was observed for lower Re numbers (Re < 12.5) and strong agreement was found for higher Re numbers (Re > 15).},

}

RevDate: 2019-05-10

**Conical Hollow Microhelices with Superior Swimming Capabilities for Targeted Cargo Delivery.**

*Advanced materials (Deerfield Beach, Fla.)* [Epub ahead of print].

Inspired by flagellate microorganisms in nature, the microhelix is considered as an ideal model for transportation in fluid environment with low Reynolds number. However, how to promote the swimming and loading capabilities of microhelices with controllable geometries remains challenging. In this study, a novel kind of conical hollow microhelices is proposed and a method is developed to rapidly fabricate these microhelices with controllable parameters by femtosecond vortex beams generated from spatial light modulation along helical scanning. Conical hollow microhelices with designable heights (H = 45-75 µm), diameters (D = 6-18 µm), pitch numbers (Pi = 2-4), taper angles (T = 0.1-0.6 rad), and pitch periods (ΔP = 10-30 µm) are efficiently fabricated. In addition, compared with straight microhelices, the forward swimming capability of conical microhelices increases by 50% and the lateral drift of the conical hollow microhelices is reduced by 70%. Finally, the capabilities of these conical hollow microhelices for nanocargo loading and release by the inner hollow core, as well as transportation of neural stem cells by the outer surface are demonstrated. This work provides new insights into faster and simultaneous transportation of multicargoes for hybrid drug delivery, targeted therapy, and noninvasive surgery in vivo.

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@article {pmid31074118,

year = {2019},

author = {Xin, C and Yang, L and Li, J and Hu, Y and Qian, D and Fan, S and Hu, K and Cai, Z and Wu, H and Wang, D and Wu, D and Chu, J},

title = {Conical Hollow Microhelices with Superior Swimming Capabilities for Targeted Cargo Delivery.},

journal = {Advanced materials (Deerfield Beach, Fla.)},

volume = {},

number = {},

pages = {e1808226},

doi = {10.1002/adma.201808226},

pmid = {31074118},

issn = {1521-4095},

support = {51875544//National Science Foundation of China/ ; 51675503//National Science Foundation of China/ ; 61805230//National Science Foundation of China/ ; 51805508//National Science Foundation of China/ ; 51805509//National Science Foundation of China/ ; WK2090000011//Fundamental Research Funds for the Central Universities/ ; WK2090090012//Fundamental Research Funds for the Central Universities/ ; WK2090000013//Fundamental Research Funds for the Central Universities/ ; WK2480000002//Fundamental Research Funds for the Central Universities/ ; WK2090090021//Fundamental Research Funds for the Central Universities/ ; 2017495//Youth Innovation Promotion Association CAS/ ; YZ201566//Chinese Academy of Sciences Instrument/ ; 2017YFB1104303//National Key R&D Program of China/ ; 2018YFB1105400//National Key R&D Program of China/ ; },

abstract = {Inspired by flagellate microorganisms in nature, the microhelix is considered as an ideal model for transportation in fluid environment with low Reynolds number. However, how to promote the swimming and loading capabilities of microhelices with controllable geometries remains challenging. In this study, a novel kind of conical hollow microhelices is proposed and a method is developed to rapidly fabricate these microhelices with controllable parameters by femtosecond vortex beams generated from spatial light modulation along helical scanning. Conical hollow microhelices with designable heights (H = 45-75 µm), diameters (D = 6-18 µm), pitch numbers (Pi = 2-4), taper angles (T = 0.1-0.6 rad), and pitch periods (ΔP = 10-30 µm) are efficiently fabricated. In addition, compared with straight microhelices, the forward swimming capability of conical microhelices increases by 50% and the lateral drift of the conical hollow microhelices is reduced by 70%. Finally, the capabilities of these conical hollow microhelices for nanocargo loading and release by the inner hollow core, as well as transportation of neural stem cells by the outer surface are demonstrated. This work provides new insights into faster and simultaneous transportation of multicargoes for hybrid drug delivery, targeted therapy, and noninvasive surgery in vivo.},

}

RevDate: 2019-05-09

**Numerical investigation on turbulent oscillatory flow through a jet pump.**

*The Journal of the Acoustical Society of America*, **145(3):**1417.

A jet pump with an asymmetrical channel can induce a time-averaged pressure drop in oscillatory flow, which can effectively suppress Gedeon streaming in looped thermoacoustic engines. In this work, the flow characteristics and time-averaged pressure drop caused by a jet pump in turbulent oscillatory flow are investigated through numerical simulation. Through the analysis of the dimensionless governing equations, the emphasis is put on the effects of Womersley number and maximum acoustic Reynolds number on the performance of the jet pump. Meanwhile, the steady flow resistance coefficients are also measured numerically. The results indicate that the oscillatory flow resistance coefficients are relatively insensitive to Womersley number when it is less than 46. Moreover, the oscillatory flow resistance coefficients agree well with the steady state flow results, which validate the quasi-static assumption in turbulent oscillatory flow. However, further increasing Womersley number will lead to a reduction in the time-averaged pressure drop. The simulation method and results, as well as the hydrodynamic mechanism beneath the results, are presented and discussed in detail.

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@article {pmid31067939,

year = {2019},

author = {Feng, Y and Gao, Y and Tang, K and Jin, T},

title = {Numerical investigation on turbulent oscillatory flow through a jet pump.},

journal = {The Journal of the Acoustical Society of America},

volume = {145},

number = {3},

pages = {1417},

doi = {10.1121/1.5094346},

pmid = {31067939},

issn = {1520-8524},

abstract = {A jet pump with an asymmetrical channel can induce a time-averaged pressure drop in oscillatory flow, which can effectively suppress Gedeon streaming in looped thermoacoustic engines. In this work, the flow characteristics and time-averaged pressure drop caused by a jet pump in turbulent oscillatory flow are investigated through numerical simulation. Through the analysis of the dimensionless governing equations, the emphasis is put on the effects of Womersley number and maximum acoustic Reynolds number on the performance of the jet pump. Meanwhile, the steady flow resistance coefficients are also measured numerically. The results indicate that the oscillatory flow resistance coefficients are relatively insensitive to Womersley number when it is less than 46. Moreover, the oscillatory flow resistance coefficients agree well with the steady state flow results, which validate the quasi-static assumption in turbulent oscillatory flow. However, further increasing Womersley number will lead to a reduction in the time-averaged pressure drop. The simulation method and results, as well as the hydrodynamic mechanism beneath the results, are presented and discussed in detail.},

}

RevDate: 2019-05-09

**Assessment of the transition k-k-ω model application to transitional oscillatory pipe flows.**

*The Journal of the Acoustical Society of America*, **145(3):**1195.

The flow transition from laminar to turbulent inside of typical thermoacoustic devices influences the heat-exchange capacities of these devices and dramatically impacts overall performances as well. A few measurements [Eckmann and Grotberg (1991), J. Fluid Mech. 222, 329-350; Hino, Sawamoto, and Takasu (1976). J. Fluid Mech. 75, 193-207] and direct simulations [Feldmann and Wagner (2012). J. Turbul. 13(32), 1-28; Feldmann and Wagner (2016a). New Results in Numerical and Experimental Fluid Mechanics X, pp. 113-122] were reported that describe the transitional oscillatory flows; however, almost no turbulence model has been developed that enables accurate detection and characterization of the reported intermittent turbulent fluctuations. The present work aims to assess the applicability of the k-kL-ω transition model to transitional oscillatory pipe flows. A sinusoidal pressure gradient is introduced into ANSYS finite-volume solver for flow field simulation at different acoustic frequencies, while a friction Reynolds number of 1440 is retained. The stationary turbulent and the laminar oscillatory pipe flows are first considered for validation and model calibration against published LDA measurements [Durst, Kikura, Lekakis, Jovanovic, and Ye (1996). Exp. Fluids 20, 417-428] and DNS results [Feldmann and Wagner (2012). J. Turbul. 13(32), 1-28] in addition to the Sexl's laminar-flow theory [Sexl (1930). Zeitschrift Phys. 61(5), 349-362]. Investigation of the total fluctuation kinetic energy of transitional oscillations reveals the appearance of intermittent fluctuations within the near-wall region at Wo = 13 during deceleration, while fully turbulent oscillations are predicted in the entire pipe domain at Wo = 5. Although the present results are qualitatively in good agreement with reported experimental [Eckmann and Grotberg (1991). J. Fluid Mech. 222, 329-350] and DNS findings [Feldmann and Wagner (2012). J. Turbul. 13(32), 1-28], the velocity profiles show poor agreement with corresponding DNS data during flow acceleration at Wo = 5.

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@article {pmid31067919,

year = {2019},

author = {Ramadan, AB and Abd El-Rahman, AI and Sabry, AS},

title = {Assessment of the transition k-k-ω model application to transitional oscillatory pipe flows.},

journal = {The Journal of the Acoustical Society of America},

volume = {145},

number = {3},

pages = {1195},

doi = {10.1121/1.5092605},

pmid = {31067919},

issn = {1520-8524},

abstract = {The flow transition from laminar to turbulent inside of typical thermoacoustic devices influences the heat-exchange capacities of these devices and dramatically impacts overall performances as well. A few measurements [Eckmann and Grotberg (1991), J. Fluid Mech. 222, 329-350; Hino, Sawamoto, and Takasu (1976). J. Fluid Mech. 75, 193-207] and direct simulations [Feldmann and Wagner (2012). J. Turbul. 13(32), 1-28; Feldmann and Wagner (2016a). New Results in Numerical and Experimental Fluid Mechanics X, pp. 113-122] were reported that describe the transitional oscillatory flows; however, almost no turbulence model has been developed that enables accurate detection and characterization of the reported intermittent turbulent fluctuations. The present work aims to assess the applicability of the k-kL-ω transition model to transitional oscillatory pipe flows. A sinusoidal pressure gradient is introduced into ANSYS finite-volume solver for flow field simulation at different acoustic frequencies, while a friction Reynolds number of 1440 is retained. The stationary turbulent and the laminar oscillatory pipe flows are first considered for validation and model calibration against published LDA measurements [Durst, Kikura, Lekakis, Jovanovic, and Ye (1996). Exp. Fluids 20, 417-428] and DNS results [Feldmann and Wagner (2012). J. Turbul. 13(32), 1-28] in addition to the Sexl's laminar-flow theory [Sexl (1930). Zeitschrift Phys. 61(5), 349-362]. Investigation of the total fluctuation kinetic energy of transitional oscillations reveals the appearance of intermittent fluctuations within the near-wall region at Wo = 13 during deceleration, while fully turbulent oscillations are predicted in the entire pipe domain at Wo = 5. Although the present results are qualitatively in good agreement with reported experimental [Eckmann and Grotberg (1991). J. Fluid Mech. 222, 329-350] and DNS findings [Feldmann and Wagner (2012). J. Turbul. 13(32), 1-28], the velocity profiles show poor agreement with corresponding DNS data during flow acceleration at Wo = 5.},

}

RevDate: 2019-05-03

**An experimental study of trailing edge noise from a pitching airfoil.**

*The Journal of the Acoustical Society of America*, **145(4):**2009.

In this study, the far-field noise from a pitching NACA 0012 airfoil was measured at a Reynolds number of 6.6 × 104. The pitching motion was in sinusoidal functions with a mean incident angle of 0°. Cases with the pitching amplitude varying from 7.5° to 15° and frequency from 3 to 8 Hz were tested, corresponding to the reduced frequency from 0.094 to 0.25. A microphone was placed in the far-field and the particle image velocimetry technique was utilized to study the flow structures near the trailing edge. The short-time Fourier transformation results of the noise signals revealed that a high-level narrow-band noise hump occurred at a specific angle of attack in a pitching cycle. At the corresponding moment, a coherent vortex street convecting on the airfoil surface was observed, and the vortex shedding frequency was in good agreement with the central frequency of the noise hump. The occurrence of the noise humps was attributed to the laminar boundary layer separation. In one pitching period, the moment when the narrow-band noise hump occurs is independent from the pitching amplitude and it is delayed as the pitching frequency increases. Larger pitching frequency or amplitude results in lower peak level of the noise humps.

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@article {pmid31046340,

year = {2019},

author = {Zhou, T and Sun, Y and Fattah, R and Zhang, X and Huang, X},

title = {An experimental study of trailing edge noise from a pitching airfoil.},

journal = {The Journal of the Acoustical Society of America},

volume = {145},

number = {4},

pages = {2009},

doi = {10.1121/1.5094898},

pmid = {31046340},

issn = {1520-8524},

abstract = {In this study, the far-field noise from a pitching NACA 0012 airfoil was measured at a Reynolds number of 6.6 × 104. The pitching motion was in sinusoidal functions with a mean incident angle of 0°. Cases with the pitching amplitude varying from 7.5° to 15° and frequency from 3 to 8 Hz were tested, corresponding to the reduced frequency from 0.094 to 0.25. A microphone was placed in the far-field and the particle image velocimetry technique was utilized to study the flow structures near the trailing edge. The short-time Fourier transformation results of the noise signals revealed that a high-level narrow-band noise hump occurred at a specific angle of attack in a pitching cycle. At the corresponding moment, a coherent vortex street convecting on the airfoil surface was observed, and the vortex shedding frequency was in good agreement with the central frequency of the noise hump. The occurrence of the noise humps was attributed to the laminar boundary layer separation. In one pitching period, the moment when the narrow-band noise hump occurs is independent from the pitching amplitude and it is delayed as the pitching frequency increases. Larger pitching frequency or amplitude results in lower peak level of the noise humps.},

}

RevDate: 2019-05-03

**10 kHz simultaneous PIV/PLIF study of the diffusion flame response to periodic acoustic forcing.**

*Applied optics*, **58(10):**C112-C120.

Response of a laminar diffusion dimethyl-ether flame forced by an acoustic field is provided. A forcing frequency of 100 Hz, which is chosen based on the typical thermo-acoustic instability frequency in a practical combustor, is applied to the flame at a Reynolds number of 250. The development of the forced vortical structures present in this flame has been investigated utilizing a burst mode laser with a repetition rate of 10 kHz. Flame/vortex interaction is visualized by planar laser-induced fluorescence (PLIF) of formaldehyde, which is used to identify the early-stage fuel decomposition in the flame. The flame structure is also correlated with the velocity field, which is obtained utilizing particle imaging velocimetry (PIV). The resulting phase-resolved and time-averaged velocity and vortex images indicate that the amplitude of excitation has pronounced effects on the flame via modifying the local heat release.

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@article {pmid31045081,

year = {2019},

author = {Gao, Y and Yang, X and Fu, C and Yang, Y and Li, Z and Zhang, H and Qi, F},

title = {10 kHz simultaneous PIV/PLIF study of the diffusion flame response to periodic acoustic forcing.},

journal = {Applied optics},

volume = {58},

number = {10},

pages = {C112-C120},

doi = {10.1364/AO.58.00C112},

pmid = {31045081},

issn = {1539-4522},

abstract = {Response of a laminar diffusion dimethyl-ether flame forced by an acoustic field is provided. A forcing frequency of 100 Hz, which is chosen based on the typical thermo-acoustic instability frequency in a practical combustor, is applied to the flame at a Reynolds number of 250. The development of the forced vortical structures present in this flame has been investigated utilizing a burst mode laser with a repetition rate of 10 kHz. Flame/vortex interaction is visualized by planar laser-induced fluorescence (PLIF) of formaldehyde, which is used to identify the early-stage fuel decomposition in the flame. The flame structure is also correlated with the velocity field, which is obtained utilizing particle imaging velocimetry (PIV). The resulting phase-resolved and time-averaged velocity and vortex images indicate that the amplitude of excitation has pronounced effects on the flame via modifying the local heat release.},

}

RevDate: 2019-05-03

**High-repetition-rate burst-mode-laser diagnostics of an unconfined lean premixed swirling flame under external acoustic excitation.**

*Applied optics*, **58(10):**C68-C78.

Lean premixed swirling flames are important in practical combustors, but a commonly encountered problem of practical swirl combustors is thermo-acoustic instability, which may cause internal structure damage to combustors. In this research, a high-repetition-rate burst-mode laser is used for simultaneous particle image velocimetry and planar laser-induced fluorescence measurement in an unconfined acoustically excited swirl burner. The time-resolved flow field and transient flame response to the acoustic perturbation are visualized at 20 kHz, offering insight into the heat release rate oscillation. The premixed mixture flow rate and acoustic modulation are varied to study the effects of Reynolds number, Strouhal number, and acoustic modulation amplitude on the swirling flame. The results suggest that the Strouhal number has a notable effect on the periodic movements of the inner recirculation zone and swirling flame configuration.

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@article {pmid31045033,

year = {2019},

author = {Wang, S and Liu, X and Wang, G and Xu, L and Li, L and Liu, Y and Huang, Z and Qi, F},

title = {High-repetition-rate burst-mode-laser diagnostics of an unconfined lean premixed swirling flame under external acoustic excitation.},

journal = {Applied optics},

volume = {58},

number = {10},

pages = {C68-C78},

doi = {10.1364/AO.58.000C68},

pmid = {31045033},

issn = {1539-4522},

abstract = {Lean premixed swirling flames are important in practical combustors, but a commonly encountered problem of practical swirl combustors is thermo-acoustic instability, which may cause internal structure damage to combustors. In this research, a high-repetition-rate burst-mode laser is used for simultaneous particle image velocimetry and planar laser-induced fluorescence measurement in an unconfined acoustically excited swirl burner. The time-resolved flow field and transient flame response to the acoustic perturbation are visualized at 20 kHz, offering insight into the heat release rate oscillation. The premixed mixture flow rate and acoustic modulation are varied to study the effects of Reynolds number, Strouhal number, and acoustic modulation amplitude on the swirling flame. The results suggest that the Strouhal number has a notable effect on the periodic movements of the inner recirculation zone and swirling flame configuration.},

}

RevDate: 2019-05-01

**Micro/nano machines driven by ultrasound power sources.**

*Chemistry, an Asian journal* [Epub ahead of print].

Autonomous micro/nano machines that can convert diverse energies into effective locomotion under low Reynolds number constraint hold considerable promises for a variety of potential applications, such as cargo delivery, localized biosensing, nano surgery and detoxification. In this review, we briefly overviewed recent advances of micro/nano machines specifically powered by ultrasound in terms of new concept design, working principle, fabrication and manipulation strategies. Last, the exclusive biocompatibility and sustainability of ultrasound powered micro/nano machines as well as critical challenges for in vivo studies have been discussed to provide insightful knowledge for developing innovative micro/nano machines with versatile functionalities and enhanced capabilities in the next phase.

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@article {pmid31042016,

year = {2019},

author = {Lu, X and Shen, H and Wang, Z and Zhao, K and Peng, H and Liu, W},

title = {Micro/nano machines driven by ultrasound power sources.},

journal = {Chemistry, an Asian journal},

volume = {},

number = {},

pages = {},

doi = {10.1002/asia.201900281},

pmid = {31042016},

issn = {1861-471X},

abstract = {Autonomous micro/nano machines that can convert diverse energies into effective locomotion under low Reynolds number constraint hold considerable promises for a variety of potential applications, such as cargo delivery, localized biosensing, nano surgery and detoxification. In this review, we briefly overviewed recent advances of micro/nano machines specifically powered by ultrasound in terms of new concept design, working principle, fabrication and manipulation strategies. Last, the exclusive biocompatibility and sustainability of ultrasound powered micro/nano machines as well as critical challenges for in vivo studies have been discussed to provide insightful knowledge for developing innovative micro/nano machines with versatile functionalities and enhanced capabilities in the next phase.},

}

RevDate: 2019-05-23

**Predictive Framework for the Spreading of Liquid Drops and the Formation of Liquid Marbles on Hydrophobic Particle Bed.**

*Langmuir : the ACS journal of surfaces and colloids*, **35(20):**6657-6668.

In this work, we have developed a model to describe the behavior of liquid drops upon impaction on hydrophobic particle bed and verified it experimentally. Poly(tetrafluoroethylene) (PTFE) particles were used to coat drops of water, aqueous solutions of glycerol (20, 40, and 60% v/v), and ethanol (5 and 12% v/v). The experiments were conducted for Weber number (We) ranging from 8 to 130 and Reynolds number (Re) ranging from 370 to 4460. The bed porosity was varied from 0.8 to 0.6. The experimental values of βmax (ratio of the diameter at the maximum spreading condition to the initial drop diameter) were estimated from the time-lapsed images captured using a high-speed camera. The theoretical βmax was estimated by making energy balances on the liquid drop. The proposed model accounts for the energy losses due to viscous dissipation and crater formation along with a change in kinetic energy and surface energy. A good agreement was obtained between the experimental βmax and the estimated theoretical βmax. The proposed model yielded a least % absolute average relative deviation (% AARD) of 5.5 ± 4.3 compared to other models available in the literature. Further, it was found that the liquid drops impacting on particle bed are completely coated with PTFE particles with βmax values greater than 2.

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@article {pmid31039316,

year = {2019},

author = {Mozhi Devan Padmanathan, A and Sneha Ravi, A and Choudhary, H and Varanakkottu, SN and Dalvi, SV},

title = {Predictive Framework for the Spreading of Liquid Drops and the Formation of Liquid Marbles on Hydrophobic Particle Bed.},

journal = {Langmuir : the ACS journal of surfaces and colloids},

volume = {35},

number = {20},

pages = {6657-6668},

doi = {10.1021/acs.langmuir.9b00698},

pmid = {31039316},

issn = {1520-5827},

abstract = {In this work, we have developed a model to describe the behavior of liquid drops upon impaction on hydrophobic particle bed and verified it experimentally. Poly(tetrafluoroethylene) (PTFE) particles were used to coat drops of water, aqueous solutions of glycerol (20, 40, and 60% v/v), and ethanol (5 and 12% v/v). The experiments were conducted for Weber number (We) ranging from 8 to 130 and Reynolds number (Re) ranging from 370 to 4460. The bed porosity was varied from 0.8 to 0.6. The experimental values of βmax (ratio of the diameter at the maximum spreading condition to the initial drop diameter) were estimated from the time-lapsed images captured using a high-speed camera. The theoretical βmax was estimated by making energy balances on the liquid drop. The proposed model accounts for the energy losses due to viscous dissipation and crater formation along with a change in kinetic energy and surface energy. A good agreement was obtained between the experimental βmax and the estimated theoretical βmax. The proposed model yielded a least % absolute average relative deviation (% AARD) of 5.5 ± 4.3 compared to other models available in the literature. Further, it was found that the liquid drops impacting on particle bed are completely coated with PTFE particles with βmax values greater than 2.},

}

RevDate: 2019-06-10

**Modeling of the Instantaneous Transvalvular Pressure Gradient in Aortic Stenosis.**

*Annals of biomedical engineering* pii:10.1007/s10439-019-02275-4 [Epub ahead of print].

The simplified and modified Bernoulli equations break down in estimating the true pressure gradient across the stenotic aortic valve due to their over simplifying assumptions of steady and inviscid conditions as well as the fundamental nature in which aortic valves are different than idealized orifices. Nevertheless, despite having newer models based on time-dependent momentum balance across an orifice, the simplified and modified Bernoulli continue to be the clinical standard because to date, they remain the only models clinically implementable. The objective of this study is to (1) illustrate the fundamental considerations necessary to accurately model the time-dependent instantaneous pressure gradient across a fixed orifice and (2) propose empirical corrections when applying orifice based models to severely stenotic aortic valves. We introduce a general model to predict the time-dependent instantaneous pressure gradient across an orifice that explicitly model the Reynolds number dependence of both the steady and unsteady terms. The accuracy of this general model is assessed with respect to previous models through pulse duplicator experiments on a round orifice model as well as an explanted stenotic surgical aortic valve both with geometric areas of 0.6 cm2 (less than 1 cm2 which is the threshold for stenosis determination) over cardiac outputs of 3 and 5 L/min and heart rates of 60, 90 and 120 bpm. The model and the raw experimental data corresponding to the orifice showed good agreement over a wide range of cardiac outputs and heart rates (R2 exceeding 0.91). The derived average and peak transvalvular pressure gradients also demonstrated good agreement with no significant differences between the respective peaks (p > 0.09). The new model proposed holds promise with its physical and closed form representation of pressure drop, however accurate modeling of the time-variability of the valve area is necessary for the model to be applied on stenotic valves.

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@article {pmid31037445,

year = {2019},

author = {Hatoum, H and Mo, XM and Crestanello, JA and Dasi, LP},

title = {Modeling of the Instantaneous Transvalvular Pressure Gradient in Aortic Stenosis.},

journal = {Annals of biomedical engineering},

volume = {},

number = {},

pages = {},

doi = {10.1007/s10439-019-02275-4},

pmid = {31037445},

issn = {1573-9686},

support = {R01 HL135505/HL/NHLBI NIH HHS/United States ; R01HL119824//National Institutes of Health/ ; 19POST34380804//American Heart Association/ ; },

abstract = {The simplified and modified Bernoulli equations break down in estimating the true pressure gradient across the stenotic aortic valve due to their over simplifying assumptions of steady and inviscid conditions as well as the fundamental nature in which aortic valves are different than idealized orifices. Nevertheless, despite having newer models based on time-dependent momentum balance across an orifice, the simplified and modified Bernoulli continue to be the clinical standard because to date, they remain the only models clinically implementable. The objective of this study is to (1) illustrate the fundamental considerations necessary to accurately model the time-dependent instantaneous pressure gradient across a fixed orifice and (2) propose empirical corrections when applying orifice based models to severely stenotic aortic valves. We introduce a general model to predict the time-dependent instantaneous pressure gradient across an orifice that explicitly model the Reynolds number dependence of both the steady and unsteady terms. The accuracy of this general model is assessed with respect to previous models through pulse duplicator experiments on a round orifice model as well as an explanted stenotic surgical aortic valve both with geometric areas of 0.6 cm2 (less than 1 cm2 which is the threshold for stenosis determination) over cardiac outputs of 3 and 5 L/min and heart rates of 60, 90 and 120 bpm. The model and the raw experimental data corresponding to the orifice showed good agreement over a wide range of cardiac outputs and heart rates (R2 exceeding 0.91). The derived average and peak transvalvular pressure gradients also demonstrated good agreement with no significant differences between the respective peaks (p > 0.09). The new model proposed holds promise with its physical and closed form representation of pressure drop, however accurate modeling of the time-variability of the valve area is necessary for the model to be applied on stenotic valves.},

}

RevDate: 2019-06-07

**Studying airflow structures in periodic cylindrical hills of human tracheal cartilaginous rings.**

*Respiratory physiology & neurobiology*, **266:**103-114 pii:S1569-9048(18)30445-2 [Epub ahead of print].

The objective of this study is to assess tracheobronchial flow features with the cartilaginous rings during a light exercising. Tracheobronchial is part of human's body airway system that carries oxygen-rich air to human's lungs as well as takes carbon dioxide out of the human's lungs. Consequently, evaluation of the flow structures in tracheobronchial is important to support diagnosis of tracheal disorders. Computational Fluid Dynamics (CFD) allows evaluating effectiveness of tracheal cartilage rings in human body under different configurations. This study utilizes Large Eddy Simulation (LES) to model an anatomically-based human large conducting airway model with and without cartilaginous rings at the breathing conditions at Reynolds number of 5,176 in trachea region. It is observed that small recirculating areas shaped between rings cavities. While these recirculating areas are decaying, similar to periodic 2D-hills, the cartilaginous rings contribute to the construction of a vortical flow structure in the main flow. The separated vortically-shaped zone creates a wake in the flow and passes inside of the next ring cavity and disturb its boundary layer. At last, the small recirculation flow impinges onto tracheal wall. The outcome of this impinge flow is a latitudinal rotating flow perpendicular to the main flow in a cavity between the two cartilaginous rings crest which appear and disappear within a hundredth of a second. Kelvin-Helmholtz instability is observed in trachea caused by shear flow created behind of interaction between these flow structures near to tracheal wavy wall and main flow. A comparison of the results between a smooth wall model named simplified model and a rough wall model named modified model shows that these structures do not exist in simplified model, which is common in modeling tracheobronchial flow. This study proposes to consider macro surface roughness to account for the separating and rotating instantaneous flow structures. Finally, solving trachea airflow with its cartilages can become one of major issues in measuring the validity and capability of solving flow in developing types of sub-grid scale models as a turbulence studies benchmark.

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@article {pmid31028849,

year = {2019},

author = {Heidarinejad, G and Roozbahani, MH and Heidarinejad, M},

title = {Studying airflow structures in periodic cylindrical hills of human tracheal cartilaginous rings.},

journal = {Respiratory physiology & neurobiology},

volume = {266},

number = {},

pages = {103-114},

doi = {10.1016/j.resp.2019.04.012},

pmid = {31028849},

issn = {1878-1519},

abstract = {The objective of this study is to assess tracheobronchial flow features with the cartilaginous rings during a light exercising. Tracheobronchial is part of human's body airway system that carries oxygen-rich air to human's lungs as well as takes carbon dioxide out of the human's lungs. Consequently, evaluation of the flow structures in tracheobronchial is important to support diagnosis of tracheal disorders. Computational Fluid Dynamics (CFD) allows evaluating effectiveness of tracheal cartilage rings in human body under different configurations. This study utilizes Large Eddy Simulation (LES) to model an anatomically-based human large conducting airway model with and without cartilaginous rings at the breathing conditions at Reynolds number of 5,176 in trachea region. It is observed that small recirculating areas shaped between rings cavities. While these recirculating areas are decaying, similar to periodic 2D-hills, the cartilaginous rings contribute to the construction of a vortical flow structure in the main flow. The separated vortically-shaped zone creates a wake in the flow and passes inside of the next ring cavity and disturb its boundary layer. At last, the small recirculation flow impinges onto tracheal wall. The outcome of this impinge flow is a latitudinal rotating flow perpendicular to the main flow in a cavity between the two cartilaginous rings crest which appear and disappear within a hundredth of a second. Kelvin-Helmholtz instability is observed in trachea caused by shear flow created behind of interaction between these flow structures near to tracheal wavy wall and main flow. A comparison of the results between a smooth wall model named simplified model and a rough wall model named modified model shows that these structures do not exist in simplified model, which is common in modeling tracheobronchial flow. This study proposes to consider macro surface roughness to account for the separating and rotating instantaneous flow structures. Finally, solving trachea airflow with its cartilages can become one of major issues in measuring the validity and capability of solving flow in developing types of sub-grid scale models as a turbulence studies benchmark.},

}

RevDate: 2019-04-24

**Assessment of air flow distribution and hazardous release dispersion around a single obstacle using Reynolds-averaged Navier-Stokes equations.**

*Heliyon*, **5(4):**e01482 pii:e01482.

The flow around a cubical building, with a pollution source at the central point of the top of the cube, is studied. The Reynolds-averaged Navier-Stokes and species concentration equations are solved for Reynolds number, Re = 40,000, is based on the height of the cube. The predictions obtained with the standard, the Kato-Launder, and the low-Reynolds number k-epsilon models are examined with various wall functions for the near wall treatment of the flow. Results are compared against Martinuzzi and Tropea measurements (J. of Fluids Eng., 115, 85-92, 1993) for the flow field and against Li and Meroney (J. of Wind Eng. and Industrial Aerodynamics, 81, 333-345, 1983) experiments and Gaussian models for the concentration distribution. It is found that the present unstructured mesh model performs similarly to the structured mesh models. Results from the Kato-Launder model are closer to the experimental data for the flow patterns and contaminant distribution on the cube's roof. However, the Kato-Launder model has an over-prediction for the recirculation zone and the contaminant distribution windward of the cube. The standard k-epsilon and the low-Reynolds number k-epsilon models predict similar flow patterns and are closer to the experimental data of the cube's windward and side face.

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@article {pmid31008408,

year = {2019},

author = {Vasilopoulos, K and Sarris, IE and Tsoutsanis, P},

title = {Assessment of air flow distribution and hazardous release dispersion around a single obstacle using Reynolds-averaged Navier-Stokes equations.},

journal = {Heliyon},

volume = {5},

number = {4},

pages = {e01482},

doi = {10.1016/j.heliyon.2019.e01482},

pmid = {31008408},

issn = {2405-8440},

abstract = {The flow around a cubical building, with a pollution source at the central point of the top of the cube, is studied. The Reynolds-averaged Navier-Stokes and species concentration equations are solved for Reynolds number, Re = 40,000, is based on the height of the cube. The predictions obtained with the standard, the Kato-Launder, and the low-Reynolds number k-epsilon models are examined with various wall functions for the near wall treatment of the flow. Results are compared against Martinuzzi and Tropea measurements (J. of Fluids Eng., 115, 85-92, 1993) for the flow field and against Li and Meroney (J. of Wind Eng. and Industrial Aerodynamics, 81, 333-345, 1983) experiments and Gaussian models for the concentration distribution. It is found that the present unstructured mesh model performs similarly to the structured mesh models. Results from the Kato-Launder model are closer to the experimental data for the flow patterns and contaminant distribution on the cube's roof. However, the Kato-Launder model has an over-prediction for the recirculation zone and the contaminant distribution windward of the cube. The standard k-epsilon and the low-Reynolds number k-epsilon models predict similar flow patterns and are closer to the experimental data of the cube's windward and side face.},

}

RevDate: 2019-04-24

**Kazantsev dynamo in turbulent compressible flows.**

*Proceedings. Mathematical, physical, and engineering sciences*, **475(2223):**20180591.

We consider the kinematic fluctuation dynamo problem in a flow that is random, white-in-time, with both solenoidal and potential components. This model is a generalization of the well-studied Kazantsev model. If both the solenoidal and potential parts have the same scaling exponent, then, as the compressibility of the flow increases, the growth rate decreases but remains positive. If the scaling exponents for the solenoidal and potential parts differ, in particular if they correspond to typical Kolmogorov and Burgers values, we again find that an increase in compressibility slows down the growth rate but does not turn it off. The slow down is, however, weaker and the critical magnetic Reynolds number is lower than when both the solenoidal and potential components display the Kolmogorov scaling. Intriguingly, we find that there exist cases, when the potential part is smoother than the solenoidal part, for which an increase in compressibility increases the growth rate. We also find that the critical value of the scaling exponent above which a dynamo is seen is unity irrespective of the compressibility. Finally, we realize that the dimension d = 3 is special, as for all other values of d the critical exponent is higher and depends on the compressibility.

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@article {pmid31007546,

year = {2019},

author = {Martins Afonso, M and Mitra, D and Vincenzi, D},

title = {Kazantsev dynamo in turbulent compressible flows.},

journal = {Proceedings. Mathematical, physical, and engineering sciences},

volume = {475},

number = {2223},

pages = {20180591},

doi = {10.1098/rspa.2018.0591},

pmid = {31007546},

issn = {1364-5021},

abstract = {We consider the kinematic fluctuation dynamo problem in a flow that is random, white-in-time, with both solenoidal and potential components. This model is a generalization of the well-studied Kazantsev model. If both the solenoidal and potential parts have the same scaling exponent, then, as the compressibility of the flow increases, the growth rate decreases but remains positive. If the scaling exponents for the solenoidal and potential parts differ, in particular if they correspond to typical Kolmogorov and Burgers values, we again find that an increase in compressibility slows down the growth rate but does not turn it off. The slow down is, however, weaker and the critical magnetic Reynolds number is lower than when both the solenoidal and potential components display the Kolmogorov scaling. Intriguingly, we find that there exist cases, when the potential part is smoother than the solenoidal part, for which an increase in compressibility increases the growth rate. We also find that the critical value of the scaling exponent above which a dynamo is seen is unity irrespective of the compressibility. Finally, we realize that the dimension d = 3 is special, as for all other values of d the critical exponent is higher and depends on the compressibility.},

}

RevDate: 2019-06-10

**Comparison of Micro-Mixing in Time Pulsed Newtonian Fluid and Viscoelastic Fluid.**

*Micromachines*, **10(4):** pii:mi10040262.

Fluid mixing plays an essential role in many microfluidic applications. Here, we compare the mixing in time pulsing flows for both a Newtonian fluid and a viscoelastic fluid at different pulsing frequencies. In general, the mixing degree in the viscoelastic fluid is higher than that in the Newtonian fluid. Particularly, the mixing in Newtonian fluid with time pulsing is decreased when the Reynolds number Re is between 0.002 and 0.01, while it is enhanced when Re is between 0.1 and 0.2 compared with that at a constant flow rate. In the viscoelastic fluid, on the other hand, the time pulsing does not change the mixing degree when the Weissenberg number Wi ≤ 20, while a larger mixing degree is realized at a higher pulsing frequency when Wi = 50.

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@article {pmid31003548,

year = {2019},

author = {Zhang, M and Zhang, W and Wu, Z and Shen, Y and Chen, Y and Lan, C and Li, F and Cai, W},

title = {Comparison of Micro-Mixing in Time Pulsed Newtonian Fluid and Viscoelastic Fluid.},

journal = {Micromachines},

volume = {10},

number = {4},

pages = {},

doi = {10.3390/mi10040262},

pmid = {31003548},

issn = {2072-666X},

abstract = {Fluid mixing plays an essential role in many microfluidic applications. Here, we compare the mixing in time pulsing flows for both a Newtonian fluid and a viscoelastic fluid at different pulsing frequencies. In general, the mixing degree in the viscoelastic fluid is higher than that in the Newtonian fluid. Particularly, the mixing in Newtonian fluid with time pulsing is decreased when the Reynolds number Re is between 0.002 and 0.01, while it is enhanced when Re is between 0.1 and 0.2 compared with that at a constant flow rate. In the viscoelastic fluid, on the other hand, the time pulsing does not change the mixing degree when the Weissenberg number Wi ≤ 20, while a larger mixing degree is realized at a higher pulsing frequency when Wi = 50.},

}

RevDate: 2019-04-24

**Wavelength selection of vortex ripples in an oscillating cylinder: The effect of curvature and background rotation.**

*Physical review. E*, **99(3-1):**033105.

We present results of laboratory experiments on the formation, evolution, and wavelength selection of vortex ripples. These ripples formed on a sediment bed at the bottom of a water-filled oscillating cylindrical tank mounted on top of a rotating table. The table is made to oscillate sinusoidally in time, while a constant background rotation was added for some experiments. The changes in bed thickness are measured using a light attenuation technique. It was found that the wavelength normalized with the excursion length depends on both a Reynolds number and the Strouhal number. This differs from straight or annular geometries where the wavelength is proportional to the excursion length. The flow in an oscillating cylinder has the peculiarity that it develops a secondary flow in the radial direction that depends on the excursion length. The effect of this secondary circulation is evident in the radial transport for small values of the Strouhal number or in the orientation of the ripples for strong enough background rotation. Additionally, ripples in an oscillating cylinder present a rich dynamic behavior where the number of ripples can oscillate even with constant forcing parameters.

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@article {pmid30999540,

year = {2019},

author = {Duran-Matute, M and van Gorp, MD and van Heijst, GJF},

title = {Wavelength selection of vortex ripples in an oscillating cylinder: The effect of curvature and background rotation.},

journal = {Physical review. E},

volume = {99},

number = {3-1},

pages = {033105},

doi = {10.1103/PhysRevE.99.033105},

pmid = {30999540},

issn = {2470-0053},

abstract = {We present results of laboratory experiments on the formation, evolution, and wavelength selection of vortex ripples. These ripples formed on a sediment bed at the bottom of a water-filled oscillating cylindrical tank mounted on top of a rotating table. The table is made to oscillate sinusoidally in time, while a constant background rotation was added for some experiments. The changes in bed thickness are measured using a light attenuation technique. It was found that the wavelength normalized with the excursion length depends on both a Reynolds number and the Strouhal number. This differs from straight or annular geometries where the wavelength is proportional to the excursion length. The flow in an oscillating cylinder has the peculiarity that it develops a secondary flow in the radial direction that depends on the excursion length. The effect of this secondary circulation is evident in the radial transport for small values of the Strouhal number or in the orientation of the ripples for strong enough background rotation. Additionally, ripples in an oscillating cylinder present a rich dynamic behavior where the number of ripples can oscillate even with constant forcing parameters.},

}

RevDate: 2019-04-24

**Investigating thermoacoustic instability mitigation dynamics with a Kuramoto model for flamelet oscillators.**

*Physical review. E*, **99(3-1):**032215.

In this paper, we present experimental observations and phenomenological modeling of the intermittent dynamics that emerge while mitigating thermoacoustic instability by rotating the otherwise static swirler in a lean premixed, laboratory-scale combustor. Starting with a self-excited thermoacoustically unstable combustor, here we find that a progressive increase in swirler rotation rate does not uniformly decrease amplitudes of coherent, sinusoidal pressure or heat-release-rate oscillations. Instead, these oscillations emerge as high-amplitude bursts separated by low-amplitude noise in the signal. At increased rotational speeds, the high-amplitude coherent oscillations become scarce and their duration in the signal reduces. The velocity field from high-speed particle image velocimetry and simultaneous pressure and chemiluminescence data support these observations. Such an intermittent route to instability mitigation is reminiscent of the opposite transition implemented by changing the Reynolds number from a fully chaotic state to a fully unstable state. To model such dynamics phenomenologically, we discretize the swirling turbulent premixed flame into an ensemble of flamelet oscillators arranged circumferentially around the center body of the swirler. The Kuramoto model is proposed for these flamelet oscillators which is subsequently used to analyze their synchronization dynamics. The order parameter r, which is a measure of the synchronization between the oscillator phases, provides critical insights on the transition from the thermoacoustically unstable to stable states via intermittency. Finally, it is shown that the Kuramoto model for flamelet oscillator can qualitatively reproduce the time-averaged and intermittent dynamics while transitioning from the state of thermoacoustic instability to a state of incoherent noisy oscillations.

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@article {pmid30999463,

year = {2019},

author = {Dutta, AK and Ramachandran, G and Chaudhuri, S},

title = {Investigating thermoacoustic instability mitigation dynamics with a Kuramoto model for flamelet oscillators.},

journal = {Physical review. E},

volume = {99},

number = {3-1},

pages = {032215},

doi = {10.1103/PhysRevE.99.032215},

pmid = {30999463},

issn = {2470-0053},

abstract = {In this paper, we present experimental observations and phenomenological modeling of the intermittent dynamics that emerge while mitigating thermoacoustic instability by rotating the otherwise static swirler in a lean premixed, laboratory-scale combustor. Starting with a self-excited thermoacoustically unstable combustor, here we find that a progressive increase in swirler rotation rate does not uniformly decrease amplitudes of coherent, sinusoidal pressure or heat-release-rate oscillations. Instead, these oscillations emerge as high-amplitude bursts separated by low-amplitude noise in the signal. At increased rotational speeds, the high-amplitude coherent oscillations become scarce and their duration in the signal reduces. The velocity field from high-speed particle image velocimetry and simultaneous pressure and chemiluminescence data support these observations. Such an intermittent route to instability mitigation is reminiscent of the opposite transition implemented by changing the Reynolds number from a fully chaotic state to a fully unstable state. To model such dynamics phenomenologically, we discretize the swirling turbulent premixed flame into an ensemble of flamelet oscillators arranged circumferentially around the center body of the swirler. The Kuramoto model is proposed for these flamelet oscillators which is subsequently used to analyze their synchronization dynamics. The order parameter r, which is a measure of the synchronization between the oscillator phases, provides critical insights on the transition from the thermoacoustically unstable to stable states via intermittency. Finally, it is shown that the Kuramoto model for flamelet oscillator can qualitatively reproduce the time-averaged and intermittent dynamics while transitioning from the state of thermoacoustic instability to a state of incoherent noisy oscillations.},

}

RevDate: 2019-04-24

**Swimming sheet near a plane surfactant-laden interface.**

*Physical review. E*, **99(3-1):**033101.

In this work we analyze the velocity of a swimming sheet near a plane surfactant-laden interface by assuming the Reynolds number and the sheet's deformation to be small. We observe a nonmonotonic dependence of the sheet's velocity on the Marangoni number (Ma) and the surface Péclet number (Pe_{s}). For a sheet passing only transverse waves, the swimming velocity increases with an increase in Ma for any fixed Pe_{s}. When Pe_{s} is increasing, on the other hand, the swimming velocity of the same sheet either increases (at large Ma) or it initially increases and then decreases (at small Ma). This dependence of the swimming velocity on Ma and Pe_{s} is altered if the sheet is passing longitudinal waves in addition to the transverse waves along its surface.

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@article {pmid30999454,

year = {2019},

author = {Shaik, VA and Ardekani, AM},

title = {Swimming sheet near a plane surfactant-laden interface.},

journal = {Physical review. E},

volume = {99},

number = {3-1},

pages = {033101},

doi = {10.1103/PhysRevE.99.033101},

pmid = {30999454},

issn = {2470-0053},

abstract = {In this work we analyze the velocity of a swimming sheet near a plane surfactant-laden interface by assuming the Reynolds number and the sheet's deformation to be small. We observe a nonmonotonic dependence of the sheet's velocity on the Marangoni number (Ma) and the surface Péclet number (Pe_{s})

. For a sheet passing only transverse waves, the swimming velocity increases with an increase in Ma for any fixed Pe_{s}.

When Pe_{s}

is increasing, on the other hand, the swimming velocity of the same sheet either increases (at large Ma) or it initially increases and then decreases (at small Ma). This dependence of the swimming velocity on Ma and Pe_{s}

is altered if the sheet is passing longitudinal waves in addition to the transverse waves along its surface.},

}

RevDate: 2019-05-07

**Peripheral artery endothelial function responses to altered shear stress patterns in humans.**

*Experimental physiology* [Epub ahead of print].

NEW FINDINGS: What is the central question of this study? What is the effect of altered shear stress pattern, with or without concurrent neurohumoral and metabolic activation, on the acute endothelial function response assessed via brachial artery flow-mediated dilatation? What is the main finding and its importance? Despite generating distinctive shear stress patterns (i.e. increases in anterograde only, anterograde only with neurohumoral and metabolic activation, and both anterograde and retrograde), similar acute improvements were observed in the brachial artery flow-mediated dilatation response in all conditions, indicating that anterograde and/or turbulent shear stress might be the essential element to induce acute increases in endothelial function.

ABSTRACT: Endothelial function is influenced by both the direction and the magnitude of shear stress. Acute improvements in endothelial function have mostly been attributed to increased anterograde shear, whereas results from many interventional models in humans suggest that enhancing shear stress in an oscillatory manner (anterograde and retrograde) might be optimal. Here, we determined the acute brachial artery shear stress (SS) and flow-mediated dilatation (FMD) responses to three shear-altering interventions [passive heat stress (HEAT), mechanical forearm compression (CUFF) and handgrip exercise (HGEX)] and examined the relationship between changes in oscillatory shear index (OSI) and changes in FMD. During separate visits, 10 young healthy men (22 ± 3 years old) underwent 10 min of HEAT, CUFF or HGEX in their left forearm. Anterograde and retrograde SS, Reynolds number, OSI and FMD were assessed at rest and during/after each intervention. Anterograde SS increased during all interventions in a stepwise manner (P < 0.05 between interventions), with the change in HGEX (∆37.7 ± 12.2 dyn cm-2 , P < 0.05) > CUFF (∆25.1 ± 11.9 dyn cm-2 , P < 0.05) > HEAT (∆14.5 ± 7.9 dyn cm-2 , P < 0.05). Retrograde SS increased during CUFF (∆-19.6 ± 4.3 dyn cm-2 , P < 0.05). Anterograde blood flow was turbulent (i.e. Reynolds number ≥ |2000|) during all interventions (P < 0.05). The relative FMD improved after all interventions (P = 0.01), and there was no relationship between ∆OSI and ∆FMD. We elicited changes in SS profiles including increased anterograde SS (HEAT and HGEX) and both increased anterograde and retrograde SS (CUFF); regardless of the SS pattern, FMD improved to the same extent. These findings suggest that the presence of anterograde and/or turbulent SS might be the key to optimizing endothelial function in acute assessment protocols.

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@article {pmid30993773,

year = {2019},

author = {Cheng, JL and Au, JS and MacDonald, MJ},

title = {Peripheral artery endothelial function responses to altered shear stress patterns in humans.},

journal = {Experimental physiology},

volume = {},

number = {},

pages = {},

doi = {10.1113/EP087597},

pmid = {30993773},

issn = {1469-445X},

support = {DG #238819-13//Natural Sciences and Engineering Research Council/ ; },

abstract = {NEW FINDINGS: What is the central question of this study? What is the effect of altered shear stress pattern, with or without concurrent neurohumoral and metabolic activation, on the acute endothelial function response assessed via brachial artery flow-mediated dilatation? What is the main finding and its importance? Despite generating distinctive shear stress patterns (i.e. increases in anterograde only, anterograde only with neurohumoral and metabolic activation, and both anterograde and retrograde), similar acute improvements were observed in the brachial artery flow-mediated dilatation response in all conditions, indicating that anterograde and/or turbulent shear stress might be the essential element to induce acute increases in endothelial function.

ABSTRACT: Endothelial function is influenced by both the direction and the magnitude of shear stress. Acute improvements in endothelial function have mostly been attributed to increased anterograde shear, whereas results from many interventional models in humans suggest that enhancing shear stress in an oscillatory manner (anterograde and retrograde) might be optimal. Here, we determined the acute brachial artery shear stress (SS) and flow-mediated dilatation (FMD) responses to three shear-altering interventions [passive heat stress (HEAT), mechanical forearm compression (CUFF) and handgrip exercise (HGEX)] and examined the relationship between changes in oscillatory shear index (OSI) and changes in FMD. During separate visits, 10 young healthy men (22 ± 3 years old) underwent 10 min of HEAT, CUFF or HGEX in their left forearm. Anterograde and retrograde SS, Reynolds number, OSI and FMD were assessed at rest and during/after each intervention. Anterograde SS increased during all interventions in a stepwise manner (P < 0.05 between interventions), with the change in HGEX (∆37.7 ± 12.2 dyn cm-2 , P < 0.05) > CUFF (∆25.1 ± 11.9 dyn cm-2 , P < 0.05) > HEAT (∆14.5 ± 7.9 dyn cm-2 , P < 0.05). Retrograde SS increased during CUFF (∆-19.6 ± 4.3 dyn cm-2 , P < 0.05). Anterograde blood flow was turbulent (i.e. Reynolds number ≥ |2000|) during all interventions (P < 0.05). The relative FMD improved after all interventions (P = 0.01), and there was no relationship between ∆OSI and ∆FMD. We elicited changes in SS profiles including increased anterograde SS (HEAT and HGEX) and both increased anterograde and retrograde SS (CUFF); regardless of the SS pattern, FMD improved to the same extent. These findings suggest that the presence of anterograde and/or turbulent SS might be the key to optimizing endothelial function in acute assessment protocols.},

}

RevDate: 2019-04-16

**Is the Zero Reynolds Number Approximation Valid for Ciliary Flows?.**

*Physical review letters*, **122(12):**124502.

Stokes equations are commonly used to model the hydrodynamic flow around cilia on the micron scale. The validity of the zero Reynolds number approximation is investigated experimentally with a flow velocimetry approach based on optical tweezers, which allows the measurement of periodic flows with high spatial and temporal resolution. We find that beating cilia generate a flow, which fundamentally differs from the stokeslet field predicted by Stokes equations. In particular, the flow velocity spatially decays at a faster rate and is gradually phase delayed at increasing distances from the cilia. This indicates that the quasisteady approximation and use of Stokes equations for unsteady ciliary flow are not always justified and the finite timescale for vorticity diffusion cannot be neglected. Our results have significant implications in studies of synchronization and collective dynamics of microswimmers.

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@article {pmid30978086,

year = {2019},

author = {Wei, D and Dehnavi, PG and Aubin-Tam, ME and Tam, D},

title = {Is the Zero Reynolds Number Approximation Valid for Ciliary Flows?.},

journal = {Physical review letters},

volume = {122},

number = {12},

pages = {124502},

doi = {10.1103/PhysRevLett.122.124502},

pmid = {30978086},

issn = {1079-7114},

abstract = {Stokes equations are commonly used to model the hydrodynamic flow around cilia on the micron scale. The validity of the zero Reynolds number approximation is investigated experimentally with a flow velocimetry approach based on optical tweezers, which allows the measurement of periodic flows with high spatial and temporal resolution. We find that beating cilia generate a flow, which fundamentally differs from the stokeslet field predicted by Stokes equations. In particular, the flow velocity spatially decays at a faster rate and is gradually phase delayed at increasing distances from the cilia. This indicates that the quasisteady approximation and use of Stokes equations for unsteady ciliary flow are not always justified and the finite timescale for vorticity diffusion cannot be neglected. Our results have significant implications in studies of synchronization and collective dynamics of microswimmers.},

}

RevDate: 2019-04-16

**Critical-Layer Structures and Mechanisms in Elastoinertial Turbulence.**

*Physical review letters*, **122(12):**124503.

Simulations of elastoinertial turbulence (EIT) of a polymer solution at low Reynolds number are shown to display localized polymer stretch fluctuations. These are very similar to structures arising from linear stability (Tollmien-Schlichting modes) and resolvent analyses, i.e., critical-layer structures localized where the mean fluid velocity equals the wave speed. Computations of self-sustained nonlinear Tollmien-Schlichting waves reveal that the critical layer exhibits stagnation points that generate sheets of large polymer stretch. These kinematics may be the genesis of similar structures in EIT.

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@article {pmid30978052,

year = {2019},

author = {Shekar, A and McMullen, RM and Wang, SN and McKeon, BJ and Graham, MD},

title = {Critical-Layer Structures and Mechanisms in Elastoinertial Turbulence.},

journal = {Physical review letters},

volume = {122},

number = {12},

pages = {124503},

doi = {10.1103/PhysRevLett.122.124503},

pmid = {30978052},

issn = {1079-7114},

abstract = {Simulations of elastoinertial turbulence (EIT) of a polymer solution at low Reynolds number are shown to display localized polymer stretch fluctuations. These are very similar to structures arising from linear stability (Tollmien-Schlichting modes) and resolvent analyses, i.e., critical-layer structures localized where the mean fluid velocity equals the wave speed. Computations of self-sustained nonlinear Tollmien-Schlichting waves reveal that the critical layer exhibits stagnation points that generate sheets of large polymer stretch. These kinematics may be the genesis of similar structures in EIT.},

}

RevDate: 2019-04-14

**Demand factor definition-A dimensionless parameter for Vertical Axis Wind Turbines.**

*MethodsX*, **6:**567-581 pii:S2215-0161(19)30048-2.

The use of dimensionless numbers like Reynolds Number, Froude Number and Webber Number has historically simplified the process of comparison of phenomena irrespective of their scales and in their classification into different categories. This paper deals with the derivational aspects of a dimensionless parameter named "Demand Factor" for optimization of Vertical Axis Wind Turbine (VAWT). •The input parameters considered in this derivation are power, wind velocity, the aspect ratio of the turbine, density of air and viscosity of air and the output parameters are length of the blade, number of blades, chord length, aerofoil shape, radius of the turbine and angular velocity at rated speed.•Four rounds of variable definition trials are carried out through the arrangement of the input parameters on the numerator and denominator positions. With the filtering out of unsuitable combinations at different stages of elimination, out of 32 combinations the expression that holds the potential to represent demand factor was identified. The process of carrying out single point optimization based on Demand factor expression is discussed along with the steps involved in numerically calculating output parameters.•The expression of Demand factor developed provides a different perspective on the process of design and optimization of VAWTs.

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@article {pmid30976530,

year = {2019},

author = {M, AA and V, M},

title = {Demand factor definition-A dimensionless parameter for Vertical Axis Wind Turbines.},

journal = {MethodsX},

volume = {6},

number = {},

pages = {567-581},

doi = {10.1016/j.mex.2019.03.003},

pmid = {30976530},

issn = {2215-0161},

abstract = {The use of dimensionless numbers like Reynolds Number, Froude Number and Webber Number has historically simplified the process of comparison of phenomena irrespective of their scales and in their classification into different categories. This paper deals with the derivational aspects of a dimensionless parameter named "Demand Factor" for optimization of Vertical Axis Wind Turbine (VAWT). •The input parameters considered in this derivation are power, wind velocity, the aspect ratio of the turbine, density of air and viscosity of air and the output parameters are length of the blade, number of blades, chord length, aerofoil shape, radius of the turbine and angular velocity at rated speed.•Four rounds of variable definition trials are carried out through the arrangement of the input parameters on the numerator and denominator positions. With the filtering out of unsuitable combinations at different stages of elimination, out of 32 combinations the expression that holds the potential to represent demand factor was identified. The process of carrying out single point optimization based on Demand factor expression is discussed along with the steps involved in numerically calculating output parameters.•The expression of Demand factor developed provides a different perspective on the process of design and optimization of VAWTs.},

}

RevDate: 2019-06-10

**Direct Numerical Simulation of Gas-Liquid Drag-Reducing Cavity Flow by the VOSET Method.**

*Polymers*, **11(4):** pii:polym11040596.

Drag reduction by polymer is an important energy-saving technology, which can reduce pumping pressure or promote the flow rate of the pipelines transporting fluid. It has been widely applied to single-phase pipelines, such as oil pipelining, district heating systems, and firefighting. However, the engineering application of the drag reduction technology in two-phase flow systems has not been reported. The reason is an unrevealed complex mechanism of two-phase drag reduction and lack of numerical tools for mechanism study. Therefore, we aim to propose governing equations and numerical methods of direct numerical simulation (DNS) for two-phase gas-liquid drag-reducing flow and try to explain the reason for the two-phase drag reduction. Efficient interface tracking method-coupled volume-of-fluid and level set (VOSET) and typical polymer constitutive model Giesekus are combined in the momentum equation of the two-phase turbulent flow. Interface smoothing for conformation tensor induced by polymer is used to ensure numerical stability of the DNS. Special features and corresponding explanations of the two-phase gas-liquid drag-reducing flow are found based on DNS results. High shear in a high Reynolds number flow depresses the efficiency of the gas-liquid drag reduction, while a high concentration of polymer promotes the efficiency. To guarantee efficient drag reduction, it is better to use a high concentration of polymer drag-reducing agents (DRAs) for high shear flow.

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@article {pmid30960580,

year = {2019},

author = {Wang, Y and Wang, Y and Cheng, Z},

title = {Direct Numerical Simulation of Gas-Liquid Drag-Reducing Cavity Flow by the VOSET Method.},

journal = {Polymers},

volume = {11},

number = {4},

pages = {},

doi = {10.3390/polym11040596},

pmid = {30960580},

issn = {2073-4360},

support = {No.51576210//National Natural Science Foundation of China (NSFC)/ ; },

abstract = {Drag reduction by polymer is an important energy-saving technology, which can reduce pumping pressure or promote the flow rate of the pipelines transporting fluid. It has been widely applied to single-phase pipelines, such as oil pipelining, district heating systems, and firefighting. However, the engineering application of the drag reduction technology in two-phase flow systems has not been reported. The reason is an unrevealed complex mechanism of two-phase drag reduction and lack of numerical tools for mechanism study. Therefore, we aim to propose governing equations and numerical methods of direct numerical simulation (DNS) for two-phase gas-liquid drag-reducing flow and try to explain the reason for the two-phase drag reduction. Efficient interface tracking method-coupled volume-of-fluid and level set (VOSET) and typical polymer constitutive model Giesekus are combined in the momentum equation of the two-phase turbulent flow. Interface smoothing for conformation tensor induced by polymer is used to ensure numerical stability of the DNS. Special features and corresponding explanations of the two-phase gas-liquid drag-reducing flow are found based on DNS results. High shear in a high Reynolds number flow depresses the efficiency of the gas-liquid drag reduction, while a high concentration of polymer promotes the efficiency. To guarantee efficient drag reduction, it is better to use a high concentration of polymer drag-reducing agents (DRAs) for high shear flow.},

}

RevDate: 2019-04-10

**The role of turbulent hydrodynamics and surface morphology on heat and mass transfer in corals.**

*Journal of the Royal Society, Interface*, **15(149):**20180448.

Corals require efficient heat and mass transfer with the overlying water column to support key biological processes, such as nutrient uptake and mitigation of thermal stress. Transfer rates are primarily determined by flow conditions, coral morphology and the physics of the resulting fluid-structure interaction, yet the relationship among these parameters is poorly understood especially for wave-dominated coral habitats. To investigate the interactive effects of these factors on fluxes of heat and mass, we measure hydrodynamic characteristics in situ over three distinct surface morphologies of massive stony corals in a Panamanian reef. Additionally, we implement a numerical model of flow and thermal transport for both current and wave conditions past a natural coral surface, as well as past three simplified coral morphologies with varying ratios of surface roughness spacing-to-height. We find oscillatory flow enhances rates of heat and mass transfer by 1.2-2.0× compared with unidirectional flow. Additionally, increases in Reynolds number and in surface roughness ratio produce up to a 3.3× and a 2.0× enhancement, respectively. However, as waves begin to dominate the flow regime relative to unidirectional currents, the underlying physical mechanisms mediating transfer rates shift from predominantly turbulence-driven to greater control by inertial accelerations, resulting in larger heat and mass transfer for small surface roughness ratios. We show that for rough corals in wave-dominated flows, novel trade-off dynamics for heat and mass transfer exist between broadly spaced roughness that enhances turbulence production versus narrowly spaced roughness that produces greater surface area. These findings have important implications for differential survivorship during heat-induced coral bleaching, particularly as thermal stress events become increasingly common with global climate change.

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@article {pmid30958231,

year = {2018},

author = {Stocking, JB and Laforsch, C and Sigl, R and Reidenbach, MA},

title = {The role of turbulent hydrodynamics and surface morphology on heat and mass transfer in corals.},

journal = {Journal of the Royal Society, Interface},

volume = {15},

number = {149},

pages = {20180448},

doi = {10.1098/rsif.2018.0448},

pmid = {30958231},

issn = {1742-5662},

abstract = {Corals require efficient heat and mass transfer with the overlying water column to support key biological processes, such as nutrient uptake and mitigation of thermal stress. Transfer rates are primarily determined by flow conditions, coral morphology and the physics of the resulting fluid-structure interaction, yet the relationship among these parameters is poorly understood especially for wave-dominated coral habitats. To investigate the interactive effects of these factors on fluxes of heat and mass, we measure hydrodynamic characteristics in situ over three distinct surface morphologies of massive stony corals in a Panamanian reef. Additionally, we implement a numerical model of flow and thermal transport for both current and wave conditions past a natural coral surface, as well as past three simplified coral morphologies with varying ratios of surface roughness spacing-to-height. We find oscillatory flow enhances rates of heat and mass transfer by 1.2-2.0× compared with unidirectional flow. Additionally, increases in Reynolds number and in surface roughness ratio produce up to a 3.3× and a 2.0× enhancement, respectively. However, as waves begin to dominate the flow regime relative to unidirectional currents, the underlying physical mechanisms mediating transfer rates shift from predominantly turbulence-driven to greater control by inertial accelerations, resulting in larger heat and mass transfer for small surface roughness ratios. We show that for rough corals in wave-dominated flows, novel trade-off dynamics for heat and mass transfer exist between broadly spaced roughness that enhances turbulence production versus narrowly spaced roughness that produces greater surface area. These findings have important implications for differential survivorship during heat-induced coral bleaching, particularly as thermal stress events become increasingly common with global climate change.},

}

RevDate: 2019-04-10

**Going with the flow: hydrodynamic cues trigger directed escapes from a stalking predator.**

*Journal of the Royal Society, Interface*, **16(151):**20180776.

In the coevolution of predator and prey, different and less well-understood rules for threat assessment apply to freely suspended organisms than to substrate-dwelling ones. Particularly vulnerable are small prey carried with the bulk movement of a surrounding fluid and thus deprived of sensory information within the bow waves of approaching predators. Some planktonic prey have solved this apparent problem, however. We quantified cues generated by the slow approach of larval clownfish (Amphiprion ocellaris) that triggered a calanoid copepod (Bestiolina similis) to escape before the fish could strike. To estimate water deformation around the copepod immediately preceding its jump, we represented the body of the fish as a rigid sphere in a hydrodynamic model that we parametrized with measurements of fish size, approach speed and distance to the copepod. Copepods of various developmental stages (CII-CVI) were sensitive to the water flow caused by the live predator, at deformation rates as low as 0.04 s-1. This rate is far lower than that predicted from experiments that used artificial predator-mimics. Additionally, copepods localized the source, with 87% of escapes directed away (greater than or equal to 90°) from the predator. Thus, copepods' survival in life-threatening situations relied on their detection of small nonlinear signals within an environment of locally linear deformation.

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@article {pmid30958200,

year = {2019},

author = {Tuttle, LJ and Robinson, HE and Takagi, D and Strickler, JR and Lenz, PH and Hartline, DK},

title = {Going with the flow: hydrodynamic cues trigger directed escapes from a stalking predator.},

journal = {Journal of the Royal Society, Interface},

volume = {16},

number = {151},

pages = {20180776},

doi = {10.1098/rsif.2018.0776},

pmid = {30958200},

issn = {1742-5662},

abstract = {In the coevolution of predator and prey, different and less well-understood rules for threat assessment apply to freely suspended organisms than to substrate-dwelling ones. Particularly vulnerable are small prey carried with the bulk movement of a surrounding fluid and thus deprived of sensory information within the bow waves of approaching predators. Some planktonic prey have solved this apparent problem, however. We quantified cues generated by the slow approach of larval clownfish (Amphiprion ocellaris) that triggered a calanoid copepod (Bestiolina similis) to escape before the fish could strike. To estimate water deformation around the copepod immediately preceding its jump, we represented the body of the fish as a rigid sphere in a hydrodynamic model that we parametrized with measurements of fish size, approach speed and distance to the copepod. Copepods of various developmental stages (CII-CVI) were sensitive to the water flow caused by the live predator, at deformation rates as low as 0.04 s-1. This rate is far lower than that predicted from experiments that used artificial predator-mimics. Additionally, copepods localized the source, with 87% of escapes directed away (greater than or equal to 90°) from the predator. Thus, copepods' survival in life-threatening situations relied on their detection of small nonlinear signals within an environment of locally linear deformation.},

}

RevDate: 2019-04-10

**Effects of cell morphology and attachment to a surface on the hydrodynamic performance of unicellular choanoflagellates.**

*Journal of the Royal Society, Interface*, **16(150):**20180736.

Choanoflagellates, eukaryotes that are important predators on bacteria in aquatic ecosystems, are closely related to animals and are used as a model system to study the evolution of animals from protozoan ancestors. The choanoflagellate Salpingoeca rosetta has a complex life cycle with different morphotypes, some unicellular and some multicellular. Here we use computational fluid dynamics to study the hydrodynamics of swimming and feeding by different unicellular stages of S. rosetta: a swimming cell with a collar of prey-capturing microvilli surrounding a single flagellum, a thecate cell attached to a surface and a dispersal-stage cell with a slender body, long flagellum and short collar. We show that a longer flagellum increases swimming speed, longer microvilli reduce speed and cell shape only affects speed when the collar is very short. The flux of prey-carrying water into the collar capture zone is greater for swimming than sessile cells, but this advantage decreases with collar size. Stalk length has little effect on flux for sessile cells. We show that ignoring the collar, as earlier models have done, overestimates flux and greatly overestimates the benefit to feeding performance of swimming versus being attached, and of a longer stalk for attached cells.

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@article {pmid30958167,

year = {2019},

author = {Nguyen, H and Koehl, MAR and Oakes, C and Bustamante, G and Fauci, L},

title = {Effects of cell morphology and attachment to a surface on the hydrodynamic performance of unicellular choanoflagellates.},

journal = {Journal of the Royal Society, Interface},

volume = {16},

number = {150},

pages = {20180736},

doi = {10.1098/rsif.2018.0736},

pmid = {30958167},

issn = {1742-5662},

abstract = {Choanoflagellates, eukaryotes that are important predators on bacteria in aquatic ecosystems, are closely related to animals and are used as a model system to study the evolution of animals from protozoan ancestors. The choanoflagellate Salpingoeca rosetta has a complex life cycle with different morphotypes, some unicellular and some multicellular. Here we use computational fluid dynamics to study the hydrodynamics of swimming and feeding by different unicellular stages of S. rosetta: a swimming cell with a collar of prey-capturing microvilli surrounding a single flagellum, a thecate cell attached to a surface and a dispersal-stage cell with a slender body, long flagellum and short collar. We show that a longer flagellum increases swimming speed, longer microvilli reduce speed and cell shape only affects speed when the collar is very short. The flux of prey-carrying water into the collar capture zone is greater for swimming than sessile cells, but this advantage decreases with collar size. Stalk length has little effect on flux for sessile cells. We show that ignoring the collar, as earlier models have done, overestimates flux and greatly overestimates the benefit to feeding performance of swimming versus being attached, and of a longer stalk for attached cells.},

}

RevDate: 2019-04-10

**Hydrodynamic functionality of the lorica in choanoflagellates.**

*Journal of the Royal Society, Interface*, **16(150):**20180478.

Choanoflagellates are unicellular eukaryotes that are ubiquitous in aquatic habitats. They have a single flagellum that creates a flow toward a collar filter composed of filter strands that extend from the cell. In one common group, the loricate choanoflagellates, the cell is suspended in an elaborate basket-like structure, the lorica, the function of which remains unknown. Here, we use Computational Fluid Dynamics to explore the possible hydrodynamic function of the lorica. We use the choanoflagellate Diaphaoneca grandis as a model organism. It has been hypothesized that the function of the lorica is to prevent refiltration (flow recirculation) and to increase the drag and, hence, increase the feeding rate and reduce the swimming speed. We find no support for these hypotheses. On the contrary, motile prey are encountered at a much lower rate by the loricate organism. The presence of the lorica does not affect the average swimming speed, but it suppresses the lateral motion and rotation of the cell. Without the lorica, the cell jiggles from side to side while swimming. The unsteady flow generated by the beating flagellum causes reversed flow through the collar filter that may wash away captured prey while it is being transported to the cell body for engulfment. The lorica substantially decreases such flow, hence it potentially increases the capture efficiency. This may be the main adaptive value of the lorica.

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@article {pmid30958164,

year = {2019},

author = {Asadzadeh, SS and Nielsen, LT and Andersen, A and Dölger, J and Kiørboe, T and Larsen, PS and Walther, JH},

title = {Hydrodynamic functionality of the lorica in choanoflagellates.},

journal = {Journal of the Royal Society, Interface},

volume = {16},

number = {150},

pages = {20180478},

doi = {10.1098/rsif.2018.0478},

pmid = {30958164},

issn = {1742-5662},

abstract = {Choanoflagellates are unicellular eukaryotes that are ubiquitous in aquatic habitats. They have a single flagellum that creates a flow toward a collar filter composed of filter strands that extend from the cell. In one common group, the loricate choanoflagellates, the cell is suspended in an elaborate basket-like structure, the lorica, the function of which remains unknown. Here, we use Computational Fluid Dynamics to explore the possible hydrodynamic function of the lorica. We use the choanoflagellate Diaphaoneca grandis as a model organism. It has been hypothesized that the function of the lorica is to prevent refiltration (flow recirculation) and to increase the drag and, hence, increase the feeding rate and reduce the swimming speed. We find no support for these hypotheses. On the contrary, motile prey are encountered at a much lower rate by the loricate organism. The presence of the lorica does not affect the average swimming speed, but it suppresses the lateral motion and rotation of the cell. Without the lorica, the cell jiggles from side to side while swimming. The unsteady flow generated by the beating flagellum causes reversed flow through the collar filter that may wash away captured prey while it is being transported to the cell body for engulfment. The lorica substantially decreases such flow, hence it potentially increases the capture efficiency. This may be the main adaptive value of the lorica.},

}

RevDate: 2019-04-10

**Hydrodynamics of the leucon sponge pump.**

*Journal of the Royal Society, Interface*, **16(150):**20180630.

Leuconoid sponges are filter-feeders with a complex system of branching inhalant and exhalant canals leading to and from the close-packed choanocyte chambers. Each of these choanocyte chambers holds many choanocytes that act as pumping units delivering the relatively high pressure rise needed to overcome the system pressure losses in canals and constrictions. Here, we test the hypothesis that, in order to deliver the high pressures observed, each choanocyte operates as a leaky, positive displacement-type pump owing to the interaction between its beating flagellar vane and the collar, open at the base for inflow but sealed above. The leaking backflow is caused by small gaps between the vaned flagellum and the collar. The choanocyte pumps act in parallel, each delivering the same high pressure, because low-pressure and high-pressure zones in the choanocyte chamber are separated by a seal (secondary reticulum). A simple analytical model is derived for the pump characteristic, and by imposing an estimated system characteristic we obtain the back-pressure characteristic that shows good agreement with available experimental data. Computational fluid dynamics is used to verify a simple model for the dependence of leak flow through gaps in a conceptual collar-vane-flagellum system and then applied to models of a choanocyte tailored to the parameters of the freshwater demosponge Spongilla lacustris to study its flows in detail. It is found that both the impermeable glycocalyx mesh covering the upper part of the collar and the secondary reticulum are indispensable features for the choanocyte pump to deliver the observed high pressures. Finally, the mechanical pump power expended by the beating flagellum is compared with the useful (reversible) pumping power received by the water flow to arrive at a typical mechanical pump efficiency of about 70%.

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@article {pmid30958143,

year = {2019},

author = {Asadzadeh, SS and Larsen, PS and Riisgård, HU and Walther, JH},

title = {Hydrodynamics of the leucon sponge pump.},

journal = {Journal of the Royal Society, Interface},

volume = {16},

number = {150},

pages = {20180630},

doi = {10.1098/rsif.2018.0630},

pmid = {30958143},

issn = {1742-5662},

abstract = {Leuconoid sponges are filter-feeders with a complex system of branching inhalant and exhalant canals leading to and from the close-packed choanocyte chambers. Each of these choanocyte chambers holds many choanocytes that act as pumping units delivering the relatively high pressure rise needed to overcome the system pressure losses in canals and constrictions. Here, we test the hypothesis that, in order to deliver the high pressures observed, each choanocyte operates as a leaky, positive displacement-type pump owing to the interaction between its beating flagellar vane and the collar, open at the base for inflow but sealed above. The leaking backflow is caused by small gaps between the vaned flagellum and the collar. The choanocyte pumps act in parallel, each delivering the same high pressure, because low-pressure and high-pressure zones in the choanocyte chamber are separated by a seal (secondary reticulum). A simple analytical model is derived for the pump characteristic, and by imposing an estimated system characteristic we obtain the back-pressure characteristic that shows good agreement with available experimental data. Computational fluid dynamics is used to verify a simple model for the dependence of leak flow through gaps in a conceptual collar-vane-flagellum system and then applied to models of a choanocyte tailored to the parameters of the freshwater demosponge Spongilla lacustris to study its flows in detail. It is found that both the impermeable glycocalyx mesh covering the upper part of the collar and the secondary reticulum are indispensable features for the choanocyte pump to deliver the observed high pressures. Finally, the mechanical pump power expended by the beating flagellum is compared with the useful (reversible) pumping power received by the water flow to arrive at a typical mechanical pump efficiency of about 70%.},

}

RevDate: 2019-04-24

**PIV measurements of the SimInhale benchmark case.**

*European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences*, **133:**183-189.

Particle Image Velocimetry (PIV) measurements with the aim of providing experimental data for the SimInhale benchmark case are presented within this work. We, therefore, present a refractive index matched, transparent model of the benchmark geometry, in which the velocity and turbulent kinetic energy fields are examined at flow rates comparable to 15, 30 and 60 L/min (Re ≈ 1000-4500) in air. Furthermore, these results are compared with Large Eddy Simulations (LES). The results reveal a Reynolds number independence of the qualitative velocity field in the range covered within this work. Good agreement is found between the PIV and LES data, with a slight over-prediction of turbulent kinetic energies by the simulations. The obtained experimental data will be part of a common, publicly accessible ERCOFTAC database along with additional results published recently.

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@article {pmid30940542,

year = {2019},

author = {Janke, T and Koullapis, P and Kassinos, SC and Bauer, K},

title = {PIV measurements of the SimInhale benchmark case.},

journal = {European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences},

volume = {133},

number = {},

pages = {183-189},

doi = {10.1016/j.ejps.2019.03.025},

pmid = {30940542},

issn = {1879-0720},

abstract = {Particle Image Velocimetry (PIV) measurements with the aim of providing experimental data for the SimInhale benchmark case are presented within this work. We, therefore, present a refractive index matched, transparent model of the benchmark geometry, in which the velocity and turbulent kinetic energy fields are examined at flow rates comparable to 15, 30 and 60 L/min (Re ≈ 1000-4500) in air. Furthermore, these results are compared with Large Eddy Simulations (LES). The results reveal a Reynolds number independence of the qualitative velocity field in the range covered within this work. Good agreement is found between the PIV and LES data, with a slight over-prediction of turbulent kinetic energies by the simulations. The obtained experimental data will be part of a common, publicly accessible ERCOFTAC database along with additional results published recently.},

}

RevDate: 2019-06-10

**High-Frequency Fluctuations in Post-stenotic Patient Specific Carotid Stenosis Fluid Dynamics: A Computational Fluid Dynamics Strategy Study.**

*Cardiovascular engineering and technology*, **10(2):**277-298.

PURPOSE: Screening of asymptomatic carotid stenoses is performed by auscultation of the carotid bruit, but the sensitivity is poor. Instead, it has been suggested to detect carotid bruit as neck's skin vibrations. We here take a first step towards a computational fluid dynamics proof-of-concept study, and investigate the robustness of our numerical approach for capturing high-frequent fluctuations in the post-stenotic flow. The aim was to find an ideal solution strategy from a pragmatic point of view, balancing accuracy with computational cost comparing an under-resolved direct numerical simulation (DNS) approach vs. three common large eddy simulation (LES) models (static/dynamic Smagorinsky and Sigma).

METHOD: We found a reference solution by performing a spatial and temporal refinement study of a stenosed carotid bifurcation with constant flow rate. The reference solution [Formula: see text] was compared against LES for both a constant and pulsatile flow.

RESULTS: Only the Sigma and Dynamic Smagorinsky models were able to replicate the flow field of the reference solution for a pulsatile simulation, however the computational cost of the Sigma model was lower. However, none of the sub-grid scale models were able to replicate the high-frequent flow in the peak-systolic constant flow rate simulations, which had a higher mean Reynolds number.

CONCLUSIONS: The Sigma model was the best combination between accuracy and cost for simulating the pulsatile post-stenotic flow field, whereas for the constant flow rate, the under-resolved DNS approach was better. These results can be used as a reference for future studies investigating high-frequent flow features.

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@article {pmid30937853,

year = {2019},

author = {Mancini, V and Bergersen, AW and Vierendeels, J and Segers, P and Valen-Sendstad, K},

title = {High-Frequency Fluctuations in Post-stenotic Patient Specific Carotid Stenosis Fluid Dynamics: A Computational Fluid Dynamics Strategy Study.},

journal = {Cardiovascular engineering and technology},

volume = {10},

number = {2},

pages = {277-298},

doi = {10.1007/s13239-019-00410-9},

pmid = {30937853},

issn = {1869-4098},

support = {644798//Horizon 2020 Framework Programme/ ; G086917N//Fonds Wetenschappelijk Onderzoek (BE)/ ; },

abstract = {PURPOSE: Screening of asymptomatic carotid stenoses is performed by auscultation of the carotid bruit, but the sensitivity is poor. Instead, it has been suggested to detect carotid bruit as neck's skin vibrations. We here take a first step towards a computational fluid dynamics proof-of-concept study, and investigate the robustness of our numerical approach for capturing high-frequent fluctuations in the post-stenotic flow. The aim was to find an ideal solution strategy from a pragmatic point of view, balancing accuracy with computational cost comparing an under-resolved direct numerical simulation (DNS) approach vs. three common large eddy simulation (LES) models (static/dynamic Smagorinsky and Sigma).

METHOD: We found a reference solution by performing a spatial and temporal refinement study of a stenosed carotid bifurcation with constant flow rate. The reference solution [Formula: see text] was compared against LES for both a constant and pulsatile flow.

RESULTS: Only the Sigma and Dynamic Smagorinsky models were able to replicate the flow field of the reference solution for a pulsatile simulation, however the computational cost of the Sigma model was lower. However, none of the sub-grid scale models were able to replicate the high-frequent flow in the peak-systolic constant flow rate simulations, which had a higher mean Reynolds number.

CONCLUSIONS: The Sigma model was the best combination between accuracy and cost for simulating the pulsatile post-stenotic flow field, whereas for the constant flow rate, the under-resolved DNS approach was better. These results can be used as a reference for future studies investigating high-frequent flow features.},

}

RevDate: 2019-04-05

CmpDate: 2019-04-05

**Dynamic characteristics of a deformable capsule in a simple shear flow.**

*Physical review. E*, **99(2-1):**023101.

The dynamic characteristics of a two-dimensional deformable capsule in a simple shear flow are studied with an immersed boundary-lattice Boltzmann method. Simulations are conducted by varying the Reynolds number (Re) from 0.0125 to 2000 and the dimensionless shear rate (G) from 0.001 to 0.5. The G-Re plane can be divided into four regions according to the deformation dependence on the parameters considered: viscous dominant, inertia dominant, transitional, and anomalous regions. There are four typical dynamic behaviors over the G-Re plane: steady deformation, prerupture state, quasisteady deformation, and continuous elongation. Analysis indicates that the pressure distribution and its variations due to the interplay of the fluid inertia force, the viscous shear stress, and the membrane elastic force determines the complex behaviors of the capsule. The effects of the bending rigidity and the internal-to-external viscosity ratio on the dynamics of the capsule are further studied. It is found that the capsule experiences smaller deformation when the higher bending rigidity is included, and the low bending rigidity does not have a remarkable influence on the capsule deformation. The capsule normally experiences smaller deformation due to the increase of the internal-to-external viscosity ratio.

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@article {pmid30934360,

year = {2019},

author = {Ma, J and Xu, L and Tian, FB and Young, J and Lai, JCS},

title = {Dynamic characteristics of a deformable capsule in a simple shear flow.},

journal = {Physical review. E},

volume = {99},

number = {2-1},

pages = {023101},

doi = {10.1103/PhysRevE.99.023101},

pmid = {30934360},

issn = {2470-0053},

abstract = {The dynamic characteristics of a two-dimensional deformable capsule in a simple shear flow are studied with an immersed boundary-lattice Boltzmann method. Simulations are conducted by varying the Reynolds number (Re) from 0.0125 to 2000 and the dimensionless shear rate (G) from 0.001 to 0.5. The G-Re plane can be divided into four regions according to the deformation dependence on the parameters considered: viscous dominant, inertia dominant, transitional, and anomalous regions. There are four typical dynamic behaviors over the G-Re plane: steady deformation, prerupture state, quasisteady deformation, and continuous elongation. Analysis indicates that the pressure distribution and its variations due to the interplay of the fluid inertia force, the viscous shear stress, and the membrane elastic force determines the complex behaviors of the capsule. The effects of the bending rigidity and the internal-to-external viscosity ratio on the dynamics of the capsule are further studied. It is found that the capsule experiences smaller deformation when the higher bending rigidity is included, and the low bending rigidity does not have a remarkable influence on the capsule deformation. The capsule normally experiences smaller deformation due to the increase of the internal-to-external viscosity ratio.},

}

RevDate: 2019-04-05

CmpDate: 2019-04-05

**1/f noise and long-term memory of coherent structures in a turbulent shear flow.**

*Physical review. E*, **99(2-1):**023106.

A shear flow of liquid metal (Galinstan) is driven in an annular channel by counter-rotating traveling magnetic fields imposed at the end caps. When the traveling velocities are large, the flow is turbulent and its azimuthal component displays random reversals. Power spectra of the velocity field exhibit a 1/f^{α} power law on several decades and are related to power-law probability distributions P(τ)∼τ^{-β} of the waiting times between successive reversals. This 1/f type spectrum is observed only when the Reynolds number is large enough. In addition, the exponents α and β are controlled by the symmetry of the system; a continuous transition between two different types of Flicker noise is observed as the equatorial symmetry of the flow is broken, in agreement with theoretical predictions.

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@article {pmid30934349,

year = {2019},

author = {Pereira, M and Gissinger, C and Fauve, S},

title = {1/f noise and long-term memory of coherent structures in a turbulent shear flow.},

journal = {Physical review. E},

volume = {99},

number = {2-1},

pages = {023106},

doi = {10.1103/PhysRevE.99.023106},

pmid = {30934349},

issn = {2470-0053},

abstract = {A shear flow of liquid metal (Galinstan) is driven in an annular channel by counter-rotating traveling magnetic fields imposed at the end caps. When the traveling velocities are large, the flow is turbulent and its azimuthal component displays random reversals. Power spectra of the velocity field exhibit a 1/f^{α}

power law on several decades and are related to power-law probability distributions P(τ)∼τ^{-β}

of the waiting times between successive reversals. This 1/f type spectrum is observed only when the Reynolds number is large enough. In addition, the exponents α and β are controlled by the symmetry of the system; a continuous transition between two different types of Flicker noise is observed as the equatorial symmetry of the flow is broken, in agreement with theoretical predictions.},

}

RevDate: 2019-03-29

**Bioinspired mechanical device generates plasma in water via cavitation.**

*Science advances*, **5(3):**eaau7765 pii:aau7765.

Nature can generate plasma in liquids more efficiently than human-designed devices using electricity, acoustics, or light. In the animal world, snapping shrimp can induce cavitation that collapses to produce high pressures and temperatures, leading to efficient plasma formation with photon and shock wave emission via energy focusing. Here, we report a bioinspired mechanical device that mimics the plasma generation technique of the snapping shrimp. This device was manufactured using additive manufacturing based on micro-x-ray computed tomography of a snapping shrimp claw molt. A spring fixture was designed to reliably actuate the claw with appropriate force and velocity to produce a high-speed water jet that matches the cavitation number and Reynolds number of the shrimp. Light emission and shocks were imaged, which indicate that our device reproduces the shrimp's plasma generation technique and is more efficient than other plasma generation methods.

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@article {pmid30899783,

year = {2019},

author = {Tang, X and Staack, D},

title = {Bioinspired mechanical device generates plasma in water via cavitation.},

journal = {Science advances},

volume = {5},

number = {3},

pages = {eaau7765},

doi = {10.1126/sciadv.aau7765},

pmid = {30899783},

issn = {2375-2548},

abstract = {Nature can generate plasma in liquids more efficiently than human-designed devices using electricity, acoustics, or light. In the animal world, snapping shrimp can induce cavitation that collapses to produce high pressures and temperatures, leading to efficient plasma formation with photon and shock wave emission via energy focusing. Here, we report a bioinspired mechanical device that mimics the plasma generation technique of the snapping shrimp. This device was manufactured using additive manufacturing based on micro-x-ray computed tomography of a snapping shrimp claw molt. A spring fixture was designed to reliably actuate the claw with appropriate force and velocity to produce a high-speed water jet that matches the cavitation number and Reynolds number of the shrimp. Light emission and shocks were imaged, which indicate that our device reproduces the shrimp's plasma generation technique and is more efficient than other plasma generation methods.},

}

RevDate: 2019-03-29

**Magnetohydrodynamic viscous fluid flow and heat transfer in a circular pipe under an externally applied constant suction.**

*Heliyon*, **5(2):**e01281 pii:e01281.

An analytical investigation of two-dimensional heat transfer behavior of an axisymmetric incompressible dissipative viscous fluid flow in a circular pipe is considered. The flow is subjected to an externally applied uniform suction over the pipe wall in the transverse direction and a constant magnetic field opposite to the wall. The reduced Navier-Stokes equations in the cylindrical system are applied for the velocity and temperature fields. Constant wall temperature is considered as the thermal boundary condition. The velocity components are expressed into stream function and its solution is acquired by the Homotopy analysis method (HAM). The effects of magnetic body force parameter(M), suction Reynolds number (Re), Prandtl number (Pr)and Eckert number (Ec) on velocity and temperature are examined and are presented in a graphical frame. Streamlines, isotherms and pressure contours are likewise pictured. It is observed that with increasing suction Reynold number decelerates axial flow, whereas it enhances the radial flow. The temperature distribution increases with an increase in Prandtl number, whereas it decreases with an increase in Eckert number (viscous dissipation effect).

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@article {pmid30891517,

year = {2019},

author = {Nagaraju, G and Garvandha, M},

title = {Magnetohydrodynamic viscous fluid flow and heat transfer in a circular pipe under an externally applied constant suction.},

journal = {Heliyon},

volume = {5},

number = {2},

pages = {e01281},

doi = {10.1016/j.heliyon.2019.e01281},

pmid = {30891517},

issn = {2405-8440},

abstract = {An analytical investigation of two-dimensional heat transfer behavior of an axisymmetric incompressible dissipative viscous fluid flow in a circular pipe is considered. The flow is subjected to an externally applied uniform suction over the pipe wall in the transverse direction and a constant magnetic field opposite to the wall. The reduced Navier-Stokes equations in the cylindrical system are applied for the velocity and temperature fields. Constant wall temperature is considered as the thermal boundary condition. The velocity components are expressed into stream function and its solution is acquired by the Homotopy analysis method (HAM). The effects of magnetic body force parameter(M), suction Reynolds number (Re), Prandtl number (Pr)and Eckert number (Ec) on velocity and temperature are examined and are presented in a graphical frame. Streamlines, isotherms and pressure contours are likewise pictured. It is observed that with increasing suction Reynold number decelerates axial flow, whereas it enhances the radial flow. The temperature distribution increases with an increase in Prandtl number, whereas it decreases with an increase in Eckert number (viscous dissipation effect).},

}

RevDate: 2019-03-29

CmpDate: 2019-03-18

**Settling slip velocity of a spherical particle in an unbounded micropolar fluid.**

*The European physical journal. E, Soft matter*, **42(3):**32 pii:10.1140/epje/i2019-11791-1.

The gravitational settling of small spherical particles in an unbounded micropolar fluid with slip surfaces is considered. The motion is studied under the assumption of low Reynolds number. The slip boundary conditions on velocity and microrotation at the surface of the spherical particle is used. The solution for the stream function of the fluid flow is obtained analytically. The settling velocity is obtained and is plotted against the Knudsen number for various values of the micropolarity parameter and constants depending on the material of the solid surface. The problem of rotational motion of a particle with slip surface is also solved and the torque coefficient acting on the spherical particle is obtained and is plotted against Knudsen number for different values of micropolarity parameter, spin parameter, and the material constants. The correction to the Basset equation for settling velocity under gravity for slip particle in micropolar fluids is discussed with the range of Knudsen number which has been proven with known results available in the literature.

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@article {pmid30879156,

year = {2019},

author = {El-Sapa, S},

title = {Settling slip velocity of a spherical particle in an unbounded micropolar fluid.},

journal = {The European physical journal. E, Soft matter},

volume = {42},

number = {3},

pages = {32},

doi = {10.1140/epje/i2019-11791-1},

pmid = {30879156},

issn = {1292-895X},

abstract = {The gravitational settling of small spherical particles in an unbounded micropolar fluid with slip surfaces is considered. The motion is studied under the assumption of low Reynolds number. The slip boundary conditions on velocity and microrotation at the surface of the spherical particle is used. The solution for the stream function of the fluid flow is obtained analytically. The settling velocity is obtained and is plotted against the Knudsen number for various values of the micropolarity parameter and constants depending on the material of the solid surface. The problem of rotational motion of a particle with slip surface is also solved and the torque coefficient acting on the spherical particle is obtained and is plotted against Knudsen number for different values of micropolarity parameter, spin parameter, and the material constants. The correction to the Basset equation for settling velocity under gravity for slip particle in micropolar fluids is discussed with the range of Knudsen number which has been proven with known results available in the literature.},

}

RevDate: 2019-04-19

**A review of beetle hindwings: Structure, mechanical properties, mechanism and bioinspiration.**

*Journal of the mechanical behavior of biomedical materials*, **94:**63-73.

Insects have a small mass and size and a low flying Reynolds number. Consequently, they serve as an excellent bionic representation of a micro air vehicle (MAV). Coleoptera (popularly referred to as beetles) have different characteristics from other flying insects. Not only can they fly at a low Reynolds number, but they also have deployable hindwings, which directly leads to a reduction in the size of their bodies. In narrow working spaces or unfavorable environments, a beetle's hindwings can fold automatically under the hard elytron. When the environment becomes conducive to flight, the hindwings can extend and help the beetle take off. This characteristic provides inspiration for the design of a bionic deployable wing system. In this paper, the structures and mechanical properties of hindwings and the mechanism of hindwing movement are reviewed, in addition to research on bioinspired deployable wings.

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@article {pmid30875616,

year = {2019},

author = {Sun, J and Liu, C and Bhushan, B},

title = {A review of beetle hindwings: Structure, mechanical properties, mechanism and bioinspiration.},

journal = {Journal of the mechanical behavior of biomedical materials},

volume = {94},

number = {},

pages = {63-73},

doi = {10.1016/j.jmbbm.2019.02.031},

pmid = {30875616},

issn = {1878-0180},

abstract = {Insects have a small mass and size and a low flying Reynolds number. Consequently, they serve as an excellent bionic representation of a micro air vehicle (MAV). Coleoptera (popularly referred to as beetles) have different characteristics from other flying insects. Not only can they fly at a low Reynolds number, but they also have deployable hindwings, which directly leads to a reduction in the size of their bodies. In narrow working spaces or unfavorable environments, a beetle's hindwings can fold automatically under the hard elytron. When the environment becomes conducive to flight, the hindwings can extend and help the beetle take off. This characteristic provides inspiration for the design of a bionic deployable wing system. In this paper, the structures and mechanical properties of hindwings and the mechanism of hindwing movement are reviewed, in addition to research on bioinspired deployable wings.},

}

RevDate: 2019-03-15

**Numerical study of crude oil batch mixing in a long channel.**

*Petroleum science*, **16(1):**187-198.

The main objective of this work is to predict the mixing of two different miscible oils in a very long channel. The background to this problem relates to the mixing of heavy and light oil in a pipeline. As a first step, a 2D channel with an aspect ratio of 250 is considered. The batch-mixing of two miscible crude oils with different viscosities and densities is modeled using an unsteady laminar model and unsteady RANS model available in the commercial CFD solver ANSYS-Fluent. For a comparison, a LES model was used for a 3D version of the 2D channel. The distinguishing feature of this work is the Lagrangian coordinate system utilized to set no-slip wall boundary conditions. The global CFD model has been validated against classical analytical solutions. Excellent agreement has been achieved. Simulations were carried out for a Reynolds number of 6300 (calculated using light oil properties) and a Schmidt number of 10 4 . The results show that, in contrast to the unsteady RANS model, the LES and unsteady laminar models produce comparable mixing dynamics for two oils in the channel. Analysis of simulations also shows that, for a channel length of 100 m and a height of 0.4 m, the complete mixing of two oils across the channel has not been achieved. We showed that the mixing zone consists of the three different mixing sub-zones, which have been identified using the averaged mass fraction of the heavy oil along the flow direction. The first sub-zone corresponds to the main front propagation area with a length of several heights of the channel. The second and third sub-zones are characterized by so-called shear-flow-driven mixing due to the Kelvin-Helmholtz vortices occurring between oils in the axial direction. It was observed that the third sub-zone has a steeper mass fraction gradient of the heavy oil in the axial direction in comparison with the second sub-zone, which corresponds to the flow-averaged mass fraction of 0.5 for the heavy oil.

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@article {pmid30873209,

year = {2019},

author = {Sepehr, H and Nikrityuk, P and Breakey, D and Sanders, RS},

title = {Numerical study of crude oil batch mixing in a long channel.},

journal = {Petroleum science},

volume = {16},

number = {1},

pages = {187-198},

doi = {10.1007/s12182-018-0276-4},

pmid = {30873209},

issn = {1672-5107},

abstract = {The main objective of this work is to predict the mixing of two different miscible oils in a very long channel. The background to this problem relates to the mixing of heavy and light oil in a pipeline. As a first step, a 2D channel with an aspect ratio of 250 is considered. The batch-mixing of two miscible crude oils with different viscosities and densities is modeled using an unsteady laminar model and unsteady RANS model available in the commercial CFD solver ANSYS-Fluent. For a comparison, a LES model was used for a 3D version of the 2D channel. The distinguishing feature of this work is the Lagrangian coordinate system utilized to set no-slip wall boundary conditions. The global CFD model has been validated against classical analytical solutions. Excellent agreement has been achieved. Simulations were carried out for a Reynolds number of 6300 (calculated using light oil properties) and a Schmidt number of 10 4 . The results show that, in contrast to the unsteady RANS model, the LES and unsteady laminar models produce comparable mixing dynamics for two oils in the channel. Analysis of simulations also shows that, for a channel length of 100 m and a height of 0.4 m, the complete mixing of two oils across the channel has not been achieved. We showed that the mixing zone consists of the three different mixing sub-zones, which have been identified using the averaged mass fraction of the heavy oil along the flow direction. The first sub-zone corresponds to the main front propagation area with a length of several heights of the channel. The second and third sub-zones are characterized by so-called shear-flow-driven mixing due to the Kelvin-Helmholtz vortices occurring between oils in the axial direction. It was observed that the third sub-zone has a steeper mass fraction gradient of the heavy oil in the axial direction in comparison with the second sub-zone, which corresponds to the flow-averaged mass fraction of 0.5 for the heavy oil.},

}

RevDate: 2019-03-29

**Microfluidic rectifier for polymer solutions flowing through porous media.**

*Biomicrofluidics*, **13(1):**014111 pii:013901BMF.

Fluidic rectification refers to anisotropic flow resistance upon changing the flow direction. Polymeric solutions, in contrast to Newtonian fluids, can exhibit an anisotropic flow resistance in microfluidic devices by tuning the channel shape at low Reynolds number. Such a concept has not been investigated in an anisotropic porous medium. We have developed a fluidic rectifier based on an anisotropic porous medium consisting of a periodic array of triangular pillars that can operate at a low Reynolds number. Rectification is achieved, when the type of high Weissenberg number elastic instabilities changes with the flow direction. The flow resistance differs across the two directions of the anisotropic porous medium geometry. We have identified the type of elastic instabilities that appear in both forward and backward directions. Particularly, we found a qualitative relation between the dead-zone instability and the onset of fluidic rectification.

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@article {pmid30867881,

year = {2019},

author = {Kawale, D and Jayaraman, J and Boukany, PE},

title = {Microfluidic rectifier for polymer solutions flowing through porous media.},

journal = {Biomicrofluidics},

volume = {13},

number = {1},

pages = {014111},

doi = {10.1063/1.5050201},

pmid = {30867881},

issn = {1932-1058},

abstract = {Fluidic rectification refers to anisotropic flow resistance upon changing the flow direction. Polymeric solutions, in contrast to Newtonian fluids, can exhibit an anisotropic flow resistance in microfluidic devices by tuning the channel shape at low Reynolds number. Such a concept has not been investigated in an anisotropic porous medium. We have developed a fluidic rectifier based on an anisotropic porous medium consisting of a periodic array of triangular pillars that can operate at a low Reynolds number. Rectification is achieved, when the type of high Weissenberg number elastic instabilities changes with the flow direction. The flow resistance differs across the two directions of the anisotropic porous medium geometry. We have identified the type of elastic instabilities that appear in both forward and backward directions. Particularly, we found a qualitative relation between the dead-zone instability and the onset of fluidic rectification.},

}

RevDate: 2019-04-28

**Impact of the TiO₂ Nanosolution Concentration on Heat Transfer Enhancement of the Twin Impingement Jet of a Heated Aluminum Plate.**

*Micromachines*, **10(3):** pii:mi10030176.

Here, the researchers carried out an experimental analysis of the effect of the TiO₂ nanosolution concentration on the heat transfer of the twin jet impingement on an aluminum plate surface. We used three different heat transfer enhancement processes. We considered the TiO₂ nanosolution coat, aluminum plate heat sink, and a twin jet impingement system. We also analyzed several other parameters like the nozzle spacing, nanosolution concentration, and the nozzle-to-plate distance and noted if these parameters could increase the heat transfer rate of the twin jet impingement system on a hot aluminum surface. The researchers prepared different nanosolutions, which consisted of varying concentrations, and coated them on the metal surface. Thereafter, we carried out an X-ray diffraction (XRD) and a Field Emission Scanning Electron Microscopy (FESEM) analysis for determining the structure and the homogeneous surface coating of the nanosolutions. This article also studied the different positions of the twin jets for determining the maximal Nusselt number (Nu). The researchers analyzed all the results and noted that the flow structure of the twin impingement jets at the interference zone was the major issue affecting the increase in the heat transfer rate. The combined influence of the spacing and nanoparticle concentration affected the flow structure, and therefore the heat transfer properties, wherein the Reynolds number (1% by volume concentration) maximally affected the Nusselt number. This improved the performance of various industrial and engineering applications. Hypothesis: Nusselt number was affected by the ratio of the nanoparticle size to the surface roughness. Heat transfer characteristics could be improved if the researchers selected an appropriate impingement system and selected the optimal levels of other factors. The surface coating with the TiO₂ nanosolution also positively affected the heat transfer rate.

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@article {pmid30866409,

year = {2019},

author = {Faris Abdullah, M and Zulkifli, R and Harun, Z and Abdullah, S and Wan Ghopa, WA and Soheil Najm, A and Humam Sulaiman, N},

title = {Impact of the TiO₂ Nanosolution Concentration on Heat Transfer Enhancement of the Twin Impingement Jet of a Heated Aluminum Plate.},

journal = {Micromachines},

volume = {10},

number = {3},

pages = {},

doi = {10.3390/mi10030176},

pmid = {30866409},

issn = {2072-666X},

abstract = {Here, the researchers carried out an experimental analysis of the effect of the TiO₂ nanosolution concentration on the heat transfer of the twin jet impingement on an aluminum plate surface. We used three different heat transfer enhancement processes. We considered the TiO₂ nanosolution coat, aluminum plate heat sink, and a twin jet impingement system. We also analyzed several other parameters like the nozzle spacing, nanosolution concentration, and the nozzle-to-plate distance and noted if these parameters could increase the heat transfer rate of the twin jet impingement system on a hot aluminum surface. The researchers prepared different nanosolutions, which consisted of varying concentrations, and coated them on the metal surface. Thereafter, we carried out an X-ray diffraction (XRD) and a Field Emission Scanning Electron Microscopy (FESEM) analysis for determining the structure and the homogeneous surface coating of the nanosolutions. This article also studied the different positions of the twin jets for determining the maximal Nusselt number (Nu). The researchers analyzed all the results and noted that the flow structure of the twin impingement jets at the interference zone was the major issue affecting the increase in the heat transfer rate. The combined influence of the spacing and nanoparticle concentration affected the flow structure, and therefore the heat transfer properties, wherein the Reynolds number (1% by volume concentration) maximally affected the Nusselt number. This improved the performance of various industrial and engineering applications. Hypothesis: Nusselt number was affected by the ratio of the nanoparticle size to the surface roughness. Heat transfer characteristics could be improved if the researchers selected an appropriate impingement system and selected the optimal levels of other factors. The surface coating with the TiO₂ nanosolution also positively affected the heat transfer rate.},

}

RevDate: 2019-04-18

**Numerical study of hydromagnetic axisymmetric peristaltic flow at high Reynolds number and wave number.**

*Biophysical reviews*, **11(2):**139-147.

The computational study of MHD peristaltic motion is investigated for axisymmetric flow problem. The developed model is present in the form of partial differential equations. Then obtained partial differential equations are transferred into stream-vorticity (ψ - ω) form. Then Galerkin Finite element method is used to find the computational results of governing problem. The current study is compared with the existing well-known results at low Reynolds number and wave number. It is revealed that the present results are in well agreement with existing results in the literature. So, it is effective for higher values of Reynolds number and wave number. The variations of streamline are present graphically against high Reynolds number. It concludes that high Reynolds number and Hartmann number increase pressure rise per unit wavelength in positive pumping region sharply.

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@article {pmid30863983,

year = {2019},

author = {Hamid, AH and Javed, T and Ali, N},

title = {Numerical study of hydromagnetic axisymmetric peristaltic flow at high Reynolds number and wave number.},

journal = {Biophysical reviews},

volume = {11},

number = {2},

pages = {139-147},

doi = {10.1007/s12551-019-00511-8},

pmid = {30863983},

issn = {1867-2450},

abstract = {The computational study of MHD peristaltic motion is investigated for axisymmetric flow problem. The developed model is present in the form of partial differential equations. Then obtained partial differential equations are transferred into stream-vorticity (ψ - ω) form. Then Galerkin Finite element method is used to find the computational results of governing problem. The current study is compared with the existing well-known results at low Reynolds number and wave number. It is revealed that the present results are in well agreement with existing results in the literature. So, it is effective for higher values of Reynolds number and wave number. The variations of streamline are present graphically against high Reynolds number. It concludes that high Reynolds number and Hartmann number increase pressure rise per unit wavelength in positive pumping region sharply.},

}

RevDate: 2019-04-05

CmpDate: 2019-04-05

**Enhanced mixing of binary droplets induced by capillary pressure.**

*Journal of colloid and interface science*, **545:**35-42.

The mixing of binary droplets is of paramount importance in microfluidic systems. In order to reveal the mixing mechanism of two free droplets suspended in the immiscible phase, we have developed a novel experimental setup to study the internal mixing in coalescing droplets with varying interfacial tension differences and droplet sizes. It is confirmed that the interfacial energy of droplets supports the jet flow and liquid bridge expansion during the coalescence of droplets. The increase of interfacial tension difference can increase the intensity of jet flow accompanied with slower liquid bridge expansion, which enhances the mixing of droplets. The decrease of droplet size can increase the initial velocity of jet flow. However, the intensity of jet flow decreases due to the rapid expansion of the liquid bridge, which results in weaker internal mixing. On this basis, a Reynolds number incorporating the jet velocity and droplet size is proposed to characterize the vortex size, which represents the degree of droplet mixing. This study presents an effective approach for enhancing the mixing of droplets.

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@article {pmid30861480,

year = {2019},

author = {Luo, X and Yin, H and Ren, J and Yan, H and Huang, X and Yang, D and He, L},

title = {Enhanced mixing of binary droplets induced by capillary pressure.},

journal = {Journal of colloid and interface science},

volume = {545},

number = {},

pages = {35-42},

doi = {10.1016/j.jcis.2019.03.016},

pmid = {30861480},

issn = {1095-7103},

abstract = {The mixing of binary droplets is of paramount importance in microfluidic systems. In order to reveal the mixing mechanism of two free droplets suspended in the immiscible phase, we have developed a novel experimental setup to study the internal mixing in coalescing droplets with varying interfacial tension differences and droplet sizes. It is confirmed that the interfacial energy of droplets supports the jet flow and liquid bridge expansion during the coalescence of droplets. The increase of interfacial tension difference can increase the intensity of jet flow accompanied with slower liquid bridge expansion, which enhances the mixing of droplets. The decrease of droplet size can increase the initial velocity of jet flow. However, the intensity of jet flow decreases due to the rapid expansion of the liquid bridge, which results in weaker internal mixing. On this basis, a Reynolds number incorporating the jet velocity and droplet size is proposed to characterize the vortex size, which represents the degree of droplet mixing. This study presents an effective approach for enhancing the mixing of droplets.},

}

RevDate: 2019-04-28

**Hydrophobicity Influence on Swimming Performance of Magnetically Driven Miniature Helical Swimmers.**

*Micromachines*, **10(3):** pii:mi10030175.

Helical microswimmers have been involved in a wide variety of applications, ranging from in vivo tasks such as targeted drug delivery to in vitro tasks such as transporting micro objects. Over the past decades, a number of studies have been established on the swimming performance of helical microswimmers and geometrical factors influencing their swimming performance. However, limited studies have focused on the influence of the hydrophobicity of swimmers' surface on their swimming performance. In this paper, we first demonstrated through theoretical analysis that the hydrophobicity of swimmer's surface material of the swimmer does affect its swimming performance: the swimmer with more hydrophobic surface is exerted less friction drag torque, and should therefore exhibit a higher step-out frequency, indicating that the swimmer with more hydrophobic surface should have better swimming performance. Then a series of experiments were conducted to verify the theoretical analysis. As a result, the main contribution of this paper is to demonstrate that one potential approach to improve the helical microswimmers' swimming performance could be making its surface more hydrophobic.

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@article {pmid30845732,

year = {2019},

author = {Ye, C and Liu, J and Wu, X and Wang, B and Zhang, L and Zheng, Y and Xu, T},

title = {Hydrophobicity Influence on Swimming Performance of Magnetically Driven Miniature Helical Swimmers.},

journal = {Micromachines},

volume = {10},

number = {3},

pages = {},

doi = {10.3390/mi10030175},

pmid = {30845732},

issn = {2072-666X},

support = {61703392//National Natural Science Foundation of China(NSFC) for Young Scholar with 223 the Project/ ; U1713201//the joint Research Fund between the NSFC and Shenzhen/ ; JCYJ20170413152640731//Fundamental Research and 224 Discipline Layout project/ ; 2018YFC0115200//National Key R&D Program of China/ ; },

abstract = {Helical microswimmers have been involved in a wide variety of applications, ranging from in vivo tasks such as targeted drug delivery to in vitro tasks such as transporting micro objects. Over the past decades, a number of studies have been established on the swimming performance of helical microswimmers and geometrical factors influencing their swimming performance. However, limited studies have focused on the influence of the hydrophobicity of swimmers' surface on their swimming performance. In this paper, we first demonstrated through theoretical analysis that the hydrophobicity of swimmer's surface material of the swimmer does affect its swimming performance: the swimmer with more hydrophobic surface is exerted less friction drag torque, and should therefore exhibit a higher step-out frequency, indicating that the swimmer with more hydrophobic surface should have better swimming performance. Then a series of experiments were conducted to verify the theoretical analysis. As a result, the main contribution of this paper is to demonstrate that one potential approach to improve the helical microswimmers' swimming performance could be making its surface more hydrophobic.},

}

RevDate: 2019-04-16

**Droplet Impact on the Super-Hydrophobic Surface with Micro-Pillar Arrays Fabricated by Hybrid Laser Ablation and Silanization Process.**

*Materials (Basel, Switzerland)*, **12(5):** pii:ma12050765.

A super-hydrophobic aluminum alloy surface with decorated pillar arrays was obtained by hybrid laser ablation and further silanization process. The as-prepared surface showed a high apparent contact angle of 158.2 ± 2.0° and low sliding angle of 3 ± 1°. Surface morphologies and surface chemistry were explored to obtain insights into the generation process of super-hydrophobicity. The main objective of this current work is to investigate the maximum spreading factor of water droplets impacting on the pillar-patterned super-hydrophobic surface based on the energy conservation concept. Although many previous studies have investigated the droplet impacting behavior on flat solid surfaces, the empirical models were proposed based on a few parameters including the Reynolds number (Re), Weber number (We), as well as the Ohnesorge number (Oh). This resulted in limitations for the super-hydrophobic surfaces due to the ignorance of the geometrical parameters of the pillars and viscous energy dissipation for liquid flow within the pillar arrays. In this paper, the maximum spreading factor was deduced from the perspective of energy balance, and the predicted results were in good agreement with our experimental results with a mean error of 4.99% and standard deviation of 0.10.

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@article {pmid30845671,

year = {2019},

author = {Xia, Z and Xiao, Y and Yang, Z and Li, L and Wang, S and Liu, X and Tian, Y},

title = {Droplet Impact on the Super-Hydrophobic Surface with Micro-Pillar Arrays Fabricated by Hybrid Laser Ablation and Silanization Process.},

journal = {Materials (Basel, Switzerland)},

volume = {12},

number = {5},

pages = {},

doi = {10.3390/ma12050765},

pmid = {30845671},

issn = {1996-1944},

support = {51675371//National Natural Science Foundation of China/ ; },

abstract = {A super-hydrophobic aluminum alloy surface with decorated pillar arrays was obtained by hybrid laser ablation and further silanization process. The as-prepared surface showed a high apparent contact angle of 158.2 ± 2.0° and low sliding angle of 3 ± 1°. Surface morphologies and surface chemistry were explored to obtain insights into the generation process of super-hydrophobicity. The main objective of this current work is to investigate the maximum spreading factor of water droplets impacting on the pillar-patterned super-hydrophobic surface based on the energy conservation concept. Although many previous studies have investigated the droplet impacting behavior on flat solid surfaces, the empirical models were proposed based on a few parameters including the Reynolds number (Re), Weber number (We), as well as the Ohnesorge number (Oh). This resulted in limitations for the super-hydrophobic surfaces due to the ignorance of the geometrical parameters of the pillars and viscous energy dissipation for liquid flow within the pillar arrays. In this paper, the maximum spreading factor was deduced from the perspective of energy balance, and the predicted results were in good agreement with our experimental results with a mean error of 4.99% and standard deviation of 0.10.},

}

RevDate: 2019-03-10

**Comparison of convective heat transfer for Kagome and tetrahedral truss-cored lattice sandwich panels.**

*Scientific reports*, **9(1):**3731 pii:10.1038/s41598-019-39704-2.

The aim of this paper is to make a thorough comparison between Kagome and tetrahedral truss-cored lattices both experimentally and numerically. Two titanium sandwich panels -one cored with the Kagome lattice and the other with the tetrahedral lattice -are manufactured by 3D printing technology. Comparisons of the thermal insulation, the inner flow pattern and the heat transfer between the two sandwich panels are completed subsequently according to the results from forced convective experiments and numerical simulation. Within the Reynolds number range of interest for this study, the Kagome lattice exhibits excellent heat dissipation compared with the tetrahedral lattice. In particular, when the cooling air flows in the direction OB of the two sandwich panels, the Kagome lattice provides an 8~37% higher overall Nusselt number for the sandwich panel compared to the tetrahedral lattice. The superiority of the Kagome lattice comes from a unique configuration in which the centre vertex acting as the vortex generator not only disturbs the primary flow but also induces more serious flow stagnation and separation. The complex fluid flow behaviours enhance heat transfer on both the endwalls and the trusses while causing a pressure drop that is almost two times higher than that of the tetrahedral lattice in the flow direction OB.

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@article {pmid30842437,

year = {2019},

author = {Yang, G and Hou, C and Zhao, M and Mao, W},

title = {Comparison of convective heat transfer for Kagome and tetrahedral truss-cored lattice sandwich panels.},

journal = {Scientific reports},

volume = {9},

number = {1},

pages = {3731},

doi = {10.1038/s41598-019-39704-2},

pmid = {30842437},

issn = {2045-2322},

support = {20160953008//Aeronautical Science Foundation of China (Aeronautic Science Foundation of China)/ ; },

abstract = {The aim of this paper is to make a thorough comparison between Kagome and tetrahedral truss-cored lattices both experimentally and numerically. Two titanium sandwich panels -one cored with the Kagome lattice and the other with the tetrahedral lattice -are manufactured by 3D printing technology. Comparisons of the thermal insulation, the inner flow pattern and the heat transfer between the two sandwich panels are completed subsequently according to the results from forced convective experiments and numerical simulation. Within the Reynolds number range of interest for this study, the Kagome lattice exhibits excellent heat dissipation compared with the tetrahedral lattice. In particular, when the cooling air flows in the direction OB of the two sandwich panels, the Kagome lattice provides an 8~37% higher overall Nusselt number for the sandwich panel compared to the tetrahedral lattice. The superiority of the Kagome lattice comes from a unique configuration in which the centre vertex acting as the vortex generator not only disturbs the primary flow but also induces more serious flow stagnation and separation. The complex fluid flow behaviours enhance heat transfer on both the endwalls and the trusses while causing a pressure drop that is almost two times higher than that of the tetrahedral lattice in the flow direction OB.},

}

RevDate: 2019-03-14

**The lift force on a charged sphere that translates and rotates in an electrolyte.**

*Electrophoresis* [Epub ahead of print].

The distortion of the charge cloud around a uniformly charged, dielectric, rigid sphere that translates and rotates in an unbounded binary, symmetric electrolyte at zero Reynolds number is examined. The zeta potential of the particle ζ is assumed small relative to the thermal voltage scale. It is assumed that the equilibrium structure of the cloud is slightly distorted, which requires that the Péclet numbers characterizing distortion due to particle translation, Pe t = U a / D , and rotation, Pe r = Ω a 2 / D , are small compared to unity. Here, a is radius of the particle; D is the ionic diffusion coefficient; U = | U | and Ω = | Ω | , where U and Ω are the rectilinear and angular velocities of the particle, respectively. Perturbation expansions for small Pe t and Pe r are employed to calculate the nonequilibrium structure of the cloud, whence the force and torque on the particle are determined. In particular, we predict that the sphere experiences a force orthogonal to its directions of translation and rotation. This "lift" force arises from the nonlinear distortion of the cloud under the combined actions of particle translation and rotation. The lift force is given by F lift = L (κ a) (ε a 3 ζ 2 / D 2) U × Ω [ 1 + O (Pe t , Pe r) ] . Here, ε is the permittivity of the electrolyte; κ - 1 is the Debye length; and L (κ a) is a negative function that decreases in magnitude with increasing κ a . The lift force implies that an unconstrained particle would follow a curved path; an electrokinetic analog of the inertial Magnus effect. Finally, the implication of the lift force on cross-streamline migration of an electrophoretic particle in shear flow is discussed.

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@article {pmid30830969,

year = {2019},

author = {Khair, AS and Balu, B},

title = {The lift force on a charged sphere that translates and rotates in an electrolyte.},

journal = {Electrophoresis},

volume = {},

number = {},

pages = {},

doi = {10.1002/elps.201900029},

pmid = {30830969},

issn = {1522-2683},

support = {CBET-135064//National Science Foundation/ ; },

abstract = {The distortion of the charge cloud around a uniformly charged, dielectric, rigid sphere that translates and rotates in an unbounded binary, symmetric electrolyte at zero Reynolds number is examined. The zeta potential of the particle ζ is assumed small relative to the thermal voltage scale. It is assumed that the equilibrium structure of the cloud is slightly distorted, which requires that the Péclet numbers characterizing distortion due to particle translation, Pe t = U a / D , and rotation, Pe r = Ω a 2 / D , are small compared to unity. Here, a is radius of the particle; D is the ionic diffusion coefficient; U = | U | and Ω = | Ω | , where U and Ω are the rectilinear and angular velocities of the particle, respectively. Perturbation expansions for small Pe t and Pe r are employed to calculate the nonequilibrium structure of the cloud, whence the force and torque on the particle are determined. In particular, we predict that the sphere experiences a force orthogonal to its directions of translation and rotation. This "lift" force arises from the nonlinear distortion of the cloud under the combined actions of particle translation and rotation. The lift force is given by F lift = L (κ a) (ε a 3 ζ 2 / D 2) U × Ω [ 1 + O (Pe t , Pe r) ] . Here, ε is the permittivity of the electrolyte; κ - 1 is the Debye length; and L (κ a) is a negative function that decreases in magnitude with increasing κ a . The lift force implies that an unconstrained particle would follow a curved path; an electrokinetic analog of the inertial Magnus effect. Finally, the implication of the lift force on cross-streamline migration of an electrophoretic particle in shear flow is discussed.},

}

RevDate: 2019-04-28

**A Comparison of Data Reduction Methods for Average Friction Factor Calculation of Adiabatic Gas Flows in Microchannels.**

*Micromachines*, **10(2):** pii:mi10030171.

In this paper, a combined numerical and experimental approach for the estimation of the average friction factor along adiabatic microchannels with compressible gas flows is presented. Pressure-drop experiments are performed for a rectangular microchannel with a hydraulic diameter of 295 μ m by varying Reynolds number up to 17,000. In parallel, the calculation of friction factor has been repeated numerically and results are compared with the experimental work. The validated numerical model was also used to gain an insight of flow physics by varying the aspect ratio and hydraulic diameter of rectangular microchannels with respect to the channel tested experimentally. This was done with an aim of verifying the role of minor loss coefficients for the estimation of the average friction factor. To have laminar, transitional, and turbulent regimes captured, numerical analysis has been performed by varying Reynolds number from 200 to 20,000. Comparison of numerically and experimentally calculated gas flow characteristics has shown that adiabatic wall treatment (Fanno flow) results in better agreement of average friction factor values with conventional theory than the isothermal treatment of gas along the microchannel. The use of a constant value for minor loss coefficients available in the literature is not recommended for microflows as they change from one assembly to the other and their accurate estimation for compressible flows requires a coupling of numerical analysis with experimental data reduction. Results presented in this work demonstrate how an adiabatic wall treatment along the length of the channel coupled with the assumption of an isentropic flow from manifold to microchannel inlet results in a self-sustained experimental data reduction method for the accurate estimation of friction factor values even in presence of significant compressibility effects. Results also demonstrate that both the assumption of perfect expansion and consequently wrong estimation of average temperature between inlet and outlet of a microchannel can be responsible for an apparent increase in experimental average friction factor in choked flow regime.

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@article {pmid30823482,

year = {2019},

author = {Rehman, D and Morini, GL and Hong, C},

title = {A Comparison of Data Reduction Methods for Average Friction Factor Calculation of Adiabatic Gas Flows in Microchannels.},

journal = {Micromachines},

volume = {10},

number = {2},

pages = {},

doi = {10.3390/mi10030171},

pmid = {30823482},

issn = {2072-666X},

support = {643095//Horizon 2020 Framework Programme/ ; },

abstract = {In this paper, a combined numerical and experimental approach for the estimation of the average friction factor along adiabatic microchannels with compressible gas flows is presented. Pressure-drop experiments are performed for a rectangular microchannel with a hydraulic diameter of 295 μ m by varying Reynolds number up to 17,000. In parallel, the calculation of friction factor has been repeated numerically and results are compared with the experimental work. The validated numerical model was also used to gain an insight of flow physics by varying the aspect ratio and hydraulic diameter of rectangular microchannels with respect to the channel tested experimentally. This was done with an aim of verifying the role of minor loss coefficients for the estimation of the average friction factor. To have laminar, transitional, and turbulent regimes captured, numerical analysis has been performed by varying Reynolds number from 200 to 20,000. Comparison of numerically and experimentally calculated gas flow characteristics has shown that adiabatic wall treatment (Fanno flow) results in better agreement of average friction factor values with conventional theory than the isothermal treatment of gas along the microchannel. The use of a constant value for minor loss coefficients available in the literature is not recommended for microflows as they change from one assembly to the other and their accurate estimation for compressible flows requires a coupling of numerical analysis with experimental data reduction. Results presented in this work demonstrate how an adiabatic wall treatment along the length of the channel coupled with the assumption of an isentropic flow from manifold to microchannel inlet results in a self-sustained experimental data reduction method for the accurate estimation of friction factor values even in presence of significant compressibility effects. Results also demonstrate that both the assumption of perfect expansion and consequently wrong estimation of average temperature between inlet and outlet of a microchannel can be responsible for an apparent increase in experimental average friction factor in choked flow regime.},

}

RevDate: 2019-03-19

**Liquid jet breakup: A new method for the preparation of poly lactic-co-glycolic acid microspheres.**

*European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V*, **137:**140-147.

The purpose of this study was to apply the phenomenon of liquid jet breakup to the preparation of sustained-release microspheres. The mechanisms of liquid jet breakup in different jet states were investigated and the single factor method was used to study the effect of each process parameter on the particle size and size distribution of microspheres. Meantime, the prepared microspheres were characterized by morphology, drug loading, encapsulation efficiency and in vitro release. The results indicated that the process of liquid jet breakup could have 5 different states. The laminar flow state dominated when the Reynolds number (Re) was low, and the prepared microspheres had larger particle sizes. When the Re was high, the turbulent state was dominant and the microspheres had smaller particle sizes. And during the transition state from the laminar flow to the turbulence, the microspheres had a wide particle size distribution. Different process parameters could affect the particle size and distribution of microspheres by changing the Re, surface tension coefficient and viscosity. The microspheres prepared by liquid jet breakup were smooth and round with the drug loading of 35% and the encapsulation efficiency of 88%. In addition, when the polymeric carrier materials were different, the microspheres could have various drug release models such as sustained release with a lag phase, sustained release with no lag phase, pulsed release and so on, which could be applied widespread in the future.

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@article {pmid30818010,

year = {2019},

author = {Xia, Y and Yuan, M and Chen, M and Li, J and Ci, T and Ke, X},

title = {Liquid jet breakup: A new method for the preparation of poly lactic-co-glycolic acid microspheres.},

journal = {European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V},

volume = {137},

number = {},

pages = {140-147},

doi = {10.1016/j.ejpb.2019.02.021},

pmid = {30818010},

issn = {1873-3441},

abstract = {The purpose of this study was to apply the phenomenon of liquid jet breakup to the preparation of sustained-release microspheres. The mechanisms of liquid jet breakup in different jet states were investigated and the single factor method was used to study the effect of each process parameter on the particle size and size distribution of microspheres. Meantime, the prepared microspheres were characterized by morphology, drug loading, encapsulation efficiency and in vitro release. The results indicated that the process of liquid jet breakup could have 5 different states. The laminar flow state dominated when the Reynolds number (Re) was low, and the prepared microspheres had larger particle sizes. When the Re was high, the turbulent state was dominant and the microspheres had smaller particle sizes. And during the transition state from the laminar flow to the turbulence, the microspheres had a wide particle size distribution. Different process parameters could affect the particle size and distribution of microspheres by changing the Re, surface tension coefficient and viscosity. The microspheres prepared by liquid jet breakup were smooth and round with the drug loading of 35% and the encapsulation efficiency of 88%. In addition, when the polymeric carrier materials were different, the microspheres could have various drug release models such as sustained release with a lag phase, sustained release with no lag phase, pulsed release and so on, which could be applied widespread in the future.},

}

RevDate: 2019-04-28

**Characterization of Chaotic Electroconvection near Flat Inert Electrodes under Oscillatory Voltages.**

*Micromachines*, **10(3):** pii:mi10030161.

The onset of electroconvective instability in an aqueous binary electrolyte under external oscillatory electric fields at a single constant frequency is investigated in a 2D parallel flat electrode setup. Direct numerical simulations (DNS) of the Poisson⁻Nernst⁻Planck equations coupled with the Navier⁻Stokes equations at a low Reynolds number are carried out. Previous studies show that direct current (DC) electric field can create electroconvection near ion-selecting membranes in microfluidic devices. In this study, we show that electroconvection can be generated near flat inert electrodes when the applied electric field is oscillatory in time. A range of applied voltage, the oscillation frequency and the ratio of ionic diffusivities is examined to characterize the regime in which electroconvection takes place. Similar to electroconvection under DC voltages, AC electroconvection occurs at sufficiently high applied voltages in units of thermal volts and is characterized by transverse instabilities, physically manifested by an array of counter-rotating vortices near the electrode surfaces. The oscillating external electric field periodically generate and destroy such unsteady vortical structures. As the oscillation frequency is reduced to O (10 - 1) of the intrinsic resistor⁻capacitor (RC) frequency of electrolyte, electroconvective instability is considerably amplified. This is accompanied by severe depletion of ionic species outside the thin electric double layer and by vigorous convective transport involving a wide range of scales including those comparable to the distance L between the parallel electrodes. The underlying mechanisms are distinctly nonlinear and multi-dimensional. However, at higher frequencies of order of the RC frequency, the electrolyte response becomes linear, and the present DNS prediction closely resembles those explained by 1D asymptotic studies. Electroconvective instability supports increased electric current across the system. Increasing anion diffusivity results in stronger amplification of electroconvection over all oscillation frequencies examined in this study. Such asymmetry in ionic diffusivity, however, does not yield consistent changes in statistics and energy spectrum at all wall-normal locations and frequencies, implying more complex dynamics and different scaling for electrolytes with unequal diffusivities. Electric current is substantially amplified beyond the ohmic current at high oscillation frequencies. Also, it is found that anion diffusivity higher than cation has stronger impact on smaller-scale motions (≲ 0.1 L).

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@article {pmid30813604,

year = {2019},

author = {Kim, J and Davidson, S and Mani, A},

title = {Characterization of Chaotic Electroconvection near Flat Inert Electrodes under Oscillatory Voltages.},

journal = {Micromachines},

volume = {10},

number = {3},

pages = {},

doi = {10.3390/mi10030161},

pmid = {30813604},

issn = {2072-666X},

abstract = {The onset of electroconvective instability in an aqueous binary electrolyte under external oscillatory electric fields at a single constant frequency is investigated in a 2D parallel flat electrode setup. Direct numerical simulations (DNS) of the Poisson⁻Nernst⁻Planck equations coupled with the Navier⁻Stokes equations at a low Reynolds number are carried out. Previous studies show that direct current (DC) electric field can create electroconvection near ion-selecting membranes in microfluidic devices. In this study, we show that electroconvection can be generated near flat inert electrodes when the applied electric field is oscillatory in time. A range of applied voltage, the oscillation frequency and the ratio of ionic diffusivities is examined to characterize the regime in which electroconvection takes place. Similar to electroconvection under DC voltages, AC electroconvection occurs at sufficiently high applied voltages in units of thermal volts and is characterized by transverse instabilities, physically manifested by an array of counter-rotating vortices near the electrode surfaces. The oscillating external electric field periodically generate and destroy such unsteady vortical structures. As the oscillation frequency is reduced to O (10 - 1) of the intrinsic resistor⁻capacitor (RC) frequency of electrolyte, electroconvective instability is considerably amplified. This is accompanied by severe depletion of ionic species outside the thin electric double layer and by vigorous convective transport involving a wide range of scales including those comparable to the distance L between the parallel electrodes. The underlying mechanisms are distinctly nonlinear and multi-dimensional. However, at higher frequencies of order of the RC frequency, the electrolyte response becomes linear, and the present DNS prediction closely resembles those explained by 1D asymptotic studies. Electroconvective instability supports increased electric current across the system. Increasing anion diffusivity results in stronger amplification of electroconvection over all oscillation frequencies examined in this study. Such asymmetry in ionic diffusivity, however, does not yield consistent changes in statistics and energy spectrum at all wall-normal locations and frequencies, implying more complex dynamics and different scaling for electrolytes with unequal diffusivities. Electric current is substantially amplified beyond the ohmic current at high oscillation frequencies. Also, it is found that anion diffusivity higher than cation has stronger impact on smaller-scale motions (≲ 0.1 L).},

}

RevDate: 2019-03-10

**Characterization of intrathecal cerebrospinal fluid geometry and dynamics in cynomolgus monkeys (macaca fascicularis) by magnetic resonance imaging.**

*PloS one*, **14(2):**e0212239 pii:PONE-D-18-36037.

Recent advancements have been made toward understanding the diagnostic and therapeutic potential of cerebrospinal fluid (CSF) and related hydrodynamics. Increased understanding of CSF dynamics may lead to improved detection of central nervous system (CNS) diseases and optimized delivery of CSF based CNS therapeutics, with many proposed therapeutics hoping to successfully treat or cure debilitating neurological conditions. Before significant strides can be made toward the research and development of interventions designed for human use, additional research must be carried out with representative subjects such as non-human primates (NHP). This study presents a geometric and hydrodynamic characterization of CSF in eight cynomolgus monkeys (Macaca fascicularis) at baseline and two-week follow-up. Results showed that CSF flow along the entire spine was laminar with a Reynolds number ranging up to 80 and average Womersley number ranging from 4.1-7.7. Maximum CSF flow rate occurred ~25 mm caudal to the foramen magnum. Peak CSF flow rate ranged from 0.3-0.6 ml/s at the C3-C4 level. Geometric analysis indicated that average intrathecal CSF volume below the foramen magnum was 7.4 ml. The average surface area of the spinal cord and dura was 44.7 and 66.7 cm2 respectively. Subarachnoid space cross-sectional area and hydraulic diameter ranged from 7-75 mm2 and 2-3.7 mm, respectively. Stroke volume had the greatest value of 0.14 ml at an axial location corresponding to C3-C4.

Additional Links: PMID-30811449

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@article {pmid30811449,

year = {2019},

author = {Khani, M and Lawrence, BJ and Sass, LR and Gibbs, CP and Pluid, JJ and Oshinski, JN and Stewart, GR and Zeller, JR and Martin, BA},

title = {Characterization of intrathecal cerebrospinal fluid geometry and dynamics in cynomolgus monkeys (macaca fascicularis) by magnetic resonance imaging.},

journal = {PloS one},

volume = {14},

number = {2},

pages = {e0212239},

doi = {10.1371/journal.pone.0212239},

pmid = {30811449},

issn = {1932-6203},

abstract = {Recent advancements have been made toward understanding the diagnostic and therapeutic potential of cerebrospinal fluid (CSF) and related hydrodynamics. Increased understanding of CSF dynamics may lead to improved detection of central nervous system (CNS) diseases and optimized delivery of CSF based CNS therapeutics, with many proposed therapeutics hoping to successfully treat or cure debilitating neurological conditions. Before significant strides can be made toward the research and development of interventions designed for human use, additional research must be carried out with representative subjects such as non-human primates (NHP). This study presents a geometric and hydrodynamic characterization of CSF in eight cynomolgus monkeys (Macaca fascicularis) at baseline and two-week follow-up. Results showed that CSF flow along the entire spine was laminar with a Reynolds number ranging up to 80 and average Womersley number ranging from 4.1-7.7. Maximum CSF flow rate occurred ~25 mm caudal to the foramen magnum. Peak CSF flow rate ranged from 0.3-0.6 ml/s at the C3-C4 level. Geometric analysis indicated that average intrathecal CSF volume below the foramen magnum was 7.4 ml. The average surface area of the spinal cord and dura was 44.7 and 66.7 cm2 respectively. Subarachnoid space cross-sectional area and hydraulic diameter ranged from 7-75 mm2 and 2-3.7 mm, respectively. Stroke volume had the greatest value of 0.14 ml at an axial location corresponding to C3-C4.},

}

RevDate: 2019-03-25

CmpDate: 2019-03-25

**Stokes flow analogous to viscous electron current in graphene.**

*Nature communications*, **10(1):**937 pii:10.1038/s41467-019-08916-5.

Electron transport in two-dimensional conducting materials such as graphene, with dominant electron-electron interaction, exhibits unusual vortex flow that leads to a nonlocal current-field relation (negative resistance), distinct from the classical Ohm's law. The transport behavior of these materials is best described by low Reynolds number hydrodynamics, where the constitutive pressure-speed relation is Stoke's law. Here we report evidence of such vortices observed in a viscous flow of Newtonian fluid in a microfluidic device consisting of a rectangular cavity-analogous to the electronic system. We extend our experimental observations to elliptic cavities of different eccentricities, and validate them by numerically solving bi-harmonic equation obtained for the viscous flow with no-slip boundary conditions. We verify the existence of a predicted threshold at which vortices appear. Strikingly, we find that a two-dimensional theoretical model captures the essential features of three-dimensional Stokes flow in experiments.

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@article {pmid30808870,

year = {2019},

author = {Mayzel, J and Steinberg, V and Varshney, A},

title = {Stokes flow analogous to viscous electron current in graphene.},

journal = {Nature communications},

volume = {10},

number = {1},

pages = {937},

doi = {10.1038/s41467-019-08916-5},

pmid = {30808870},

issn = {2041-1723},

abstract = {Electron transport in two-dimensional conducting materials such as graphene, with dominant electron-electron interaction, exhibits unusual vortex flow that leads to a nonlocal current-field relation (negative resistance), distinct from the classical Ohm's law. The transport behavior of these materials is best described by low Reynolds number hydrodynamics, where the constitutive pressure-speed relation is Stoke's law. Here we report evidence of such vortices observed in a viscous flow of Newtonian fluid in a microfluidic device consisting of a rectangular cavity-analogous to the electronic system. We extend our experimental observations to elliptic cavities of different eccentricities, and validate them by numerically solving bi-harmonic equation obtained for the viscous flow with no-slip boundary conditions. We verify the existence of a predicted threshold at which vortices appear. Strikingly, we find that a two-dimensional theoretical model captures the essential features of three-dimensional Stokes flow in experiments.},

}

RevDate: 2019-04-06

**Settling velocity and size distribution measurement of anaerobic granular sludge using microscopic image analysis.**

*Journal of microbiological methods*, **159:**81-90.

Settling velocity and size distribution of anaerobic granular sludge samples were studied using microscopic image analysis and settling column experiments. Five granule samples were considered in this study. Three samples were collected at the Top, Middle and Bottom sections of a lab scale upflow anaerobic sludge bed reactor (UASB). Two other granule samples were obtained from industries. This paper aims to establish a method that uses microscopic image analysis and shape factor as a tool to determine the size distribution and settling velocity of anaerobic granules. Image analysis technique was used to calculate the shape factor and equivalent diameter of granules. The equivalent diameter was then used to calculate the theoretical settling velocities based on Allen's formula and estimate size distributions. The results showed that there was a good agreement between the theoretical and experimental mean settling velocity values. Both measured and calculated settling velocities increased with increasing Reynolds number (Re). However, the agreement between measured and calculated values was found to be weaker at higher Re values. Size distribution analyses of the granules have revealed that there was significant difference in the size distribution of granule samples collected at different heights of the lab scale reactor. Overall, granules from the bottom section of the reactor had larger diameter, settling velocity and shape factor than those at the middle and top section granules. Whereas granules collected from the top section exhibited the smallest granular diameter, settling velocity and shape factor.

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@article {pmid30802483,

year = {2019},

author = {Tassew, FA and Bergland, WH and Dinamarca, C and Bakke, R},

title = {Settling velocity and size distribution measurement of anaerobic granular sludge using microscopic image analysis.},

journal = {Journal of microbiological methods},

volume = {159},

number = {},

pages = {81-90},

doi = {10.1016/j.mimet.2019.02.013},

pmid = {30802483},

issn = {1872-8359},

abstract = {Settling velocity and size distribution of anaerobic granular sludge samples were studied using microscopic image analysis and settling column experiments. Five granule samples were considered in this study. Three samples were collected at the Top, Middle and Bottom sections of a lab scale upflow anaerobic sludge bed reactor (UASB). Two other granule samples were obtained from industries. This paper aims to establish a method that uses microscopic image analysis and shape factor as a tool to determine the size distribution and settling velocity of anaerobic granules. Image analysis technique was used to calculate the shape factor and equivalent diameter of granules. The equivalent diameter was then used to calculate the theoretical settling velocities based on Allen's formula and estimate size distributions. The results showed that there was a good agreement between the theoretical and experimental mean settling velocity values. Both measured and calculated settling velocities increased with increasing Reynolds number (Re). However, the agreement between measured and calculated values was found to be weaker at higher Re values. Size distribution analyses of the granules have revealed that there was significant difference in the size distribution of granule samples collected at different heights of the lab scale reactor. Overall, granules from the bottom section of the reactor had larger diameter, settling velocity and shape factor than those at the middle and top section granules. Whereas granules collected from the top section exhibited the smallest granular diameter, settling velocity and shape factor.},

}

RevDate: 2019-02-27

**Competing Lagrangians for incompressible and compressible viscous flow.**

*Royal Society open science*, **6(1):**181595 pii:rsos181595.

A recently proposed variational principle with a discontinuous Lagrangian for viscous flow is reinterpreted against the background of stochastic variational descriptions of dissipative systems, underpinning its physical basis from a different viewpoint. It is shown that additional non-classical contributions to the friction force occurring in the momentum balance vanish by time averaging. Accordingly, the discontinuous Lagrangian can alternatively be understood from the standpoint of an analogous deterministic model for irreversible processes of stochastic character. A comparison is made with established stochastic variational descriptions and an alternative deterministic approach based on a first integral of Navier-Stokes equations is undertaken. The applicability of the discontinuous Lagrangian approach for different Reynolds number regimes is discussed considering the Kolmogorov time scale. A generalization for compressible flow is elaborated and its use demonstrated for damped sound waves.

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@article {pmid30800393,

year = {2019},

author = {Marner, F and Scholle, M and Herrmann, D and Gaskell, PH},

title = {Competing Lagrangians for incompressible and compressible viscous flow.},

journal = {Royal Society open science},

volume = {6},

number = {1},

pages = {181595},

doi = {10.1098/rsos.181595},

pmid = {30800393},

issn = {2054-5703},

abstract = {A recently proposed variational principle with a discontinuous Lagrangian for viscous flow is reinterpreted against the background of stochastic variational descriptions of dissipative systems, underpinning its physical basis from a different viewpoint. It is shown that additional non-classical contributions to the friction force occurring in the momentum balance vanish by time averaging. Accordingly, the discontinuous Lagrangian can alternatively be understood from the standpoint of an analogous deterministic model for irreversible processes of stochastic character. A comparison is made with established stochastic variational descriptions and an alternative deterministic approach based on a first integral of Navier-Stokes equations is undertaken. The applicability of the discontinuous Lagrangian approach for different Reynolds number regimes is discussed considering the Kolmogorov time scale. A generalization for compressible flow is elaborated and its use demonstrated for damped sound waves.},

}

RevDate: 2019-03-29

**Groundwater flow velocities in a fractured carbonate aquifer-type: Implications for contaminant transport.**

*Journal of contaminant hydrology*, **222:**1-16.

Contaminants that are highly soluble in groundwater are rapidly transported via fractures in mechanically resistant sedimentary rock aquifers. Hence, a rigorous methodology is needed to estimate groundwater flow velocities in such fractured aquifers. Here, we propose an approach using borehole hydraulic testing to compute flow velocities in an un-faulted area of a fractured carbonate aquifer by applying the cubic law to a parallel plate model. The Cadeby Formation (Yorkshire, NE England) - a Permian dolostone aquifer present beneath the University of Leeds Farm - is the fractured aquifer selected for this hydraulic experiment. The bedding plane fractures of this dolostone aquifer, which are sub-horizontal, sub-parallel and laterally persistent, largely dominate the flow at shallow (<~40 mBGL) depths. These flowing bedding plane discontinuities are separated by a rock matrix which is relatively impermeable (Kwell-test/Kcore-plug~104) as is common in fractured carbonate aquifers. In the workflow reported here, the number of flowing fractures - mainly bedding plane fractures - intersecting three open monitoring wells are found from temperature/fluid conductivity and acoustic/optical televiewer logging. Following well installation, average fracture hydraulic apertures for screened intervals are found from analysis of slug tests. For the case study aquifer, this workflow predicts hydraulic apertures ranging from 0.10 up to 0.54 mm. However, groundwater flow velocities range within two order of magnitude from 13 up to 242 m/day. Notably, fracture apertures and flow velocities rapidly reduce with increasing depth below the water table; the upper ~10 m shows relatively high values of hydraulic conductivity (0.30-2.85 m/day) and corresponding flow velocity (33-242 m/day). Permeability development around the water table in carbonate aquifer-types is common, and arises where high pCO2 recharge water from the soil zone causes calcite/dolomite dissolution. Hence, agricultural contaminants entering the aquifer with recharge water are laterally transported rapidly within this upper part. Computation of groundwater flow velocities allows determination of the Reynolds number. Values of up ~1, indicating the lower limit of the transition from laminar to turbulent flow, are found at the studied site, which is situated away from major fault traces. Hence, turbulent flow is likely to arise in proximity to tectonic structures, such as normal faults, which localize flow and enhance karstification. The occurrence of turbulent flow in correspondence of such tectonic structures should be represented in regional groundwater flow simulations.

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@article {pmid30795856,

year = {2019},

author = {Medici, G and West, LJ and Banwart, SA},

title = {Groundwater flow velocities in a fractured carbonate aquifer-type: Implications for contaminant transport.},

journal = {Journal of contaminant hydrology},

volume = {222},

number = {},

pages = {1-16},

doi = {10.1016/j.jconhyd.2019.02.001},

pmid = {30795856},

issn = {1873-6009},

abstract = {Contaminants that are highly soluble in groundwater are rapidly transported via fractures in mechanically resistant sedimentary rock aquifers. Hence, a rigorous methodology is needed to estimate groundwater flow velocities in such fractured aquifers. Here, we propose an approach using borehole hydraulic testing to compute flow velocities in an un-faulted area of a fractured carbonate aquifer by applying the cubic law to a parallel plate model. The Cadeby Formation (Yorkshire, NE England) - a Permian dolostone aquifer present beneath the University of Leeds Farm - is the fractured aquifer selected for this hydraulic experiment. The bedding plane fractures of this dolostone aquifer, which are sub-horizontal, sub-parallel and laterally persistent, largely dominate the flow at shallow (<~40 mBGL) depths. These flowing bedding plane discontinuities are separated by a rock matrix which is relatively impermeable (Kwell-test/Kcore-plug~104) as is common in fractured carbonate aquifers. In the workflow reported here, the number of flowing fractures - mainly bedding plane fractures - intersecting three open monitoring wells are found from temperature/fluid conductivity and acoustic/optical televiewer logging. Following well installation, average fracture hydraulic apertures for screened intervals are found from analysis of slug tests. For the case study aquifer, this workflow predicts hydraulic apertures ranging from 0.10 up to 0.54 mm. However, groundwater flow velocities range within two order of magnitude from 13 up to 242 m/day. Notably, fracture apertures and flow velocities rapidly reduce with increasing depth below the water table; the upper ~10 m shows relatively high values of hydraulic conductivity (0.30-2.85 m/day) and corresponding flow velocity (33-242 m/day). Permeability development around the water table in carbonate aquifer-types is common, and arises where high pCO2 recharge water from the soil zone causes calcite/dolomite dissolution. Hence, agricultural contaminants entering the aquifer with recharge water are laterally transported rapidly within this upper part. Computation of groundwater flow velocities allows determination of the Reynolds number. Values of up ~1, indicating the lower limit of the transition from laminar to turbulent flow, are found at the studied site, which is situated away from major fault traces. Hence, turbulent flow is likely to arise in proximity to tectonic structures, such as normal faults, which localize flow and enhance karstification. The occurrence of turbulent flow in correspondence of such tectonic structures should be represented in regional groundwater flow simulations.},

}

RevDate: 2019-04-08

**Microfabricaton of microfluidic check valves using comb-shaped moving plug for suppression of backflow in microchannel.**

*Biomedical microdevices*, **21(1):**19 pii:10.1007/s10544-019-0365-1.

This study reports on an efficient microscale one-way valve system that combines the physical properties of photopolymerized microstructures and viscoelastic microchannels to rectify flows with low Reynolds numbers. The comb-shaped moving plug in the microchannel prevented backflow in the closed state to ensure that the microchannel remained completely blocked in the closed state, but allowed forward flow in the open state. This microfluidic check valve was microfabricated using the combination of the soft lithography and the releasing methods with the use of a double photoresist layer to create microchannels and free-moving comb-shaped microstructures, respectively. As a result, the microfluidic check valves elicited average high-pressure differences as much as 10.75 kPa between the backward and forward flows at low Reynolds numbers of the order of 0.253, thus demonstrating efficient rectification of microfluids. This study supports the use of rectification systems for the development of biomedical devices, such as drug delivery, micropumps, and lab-on-a-chip, by allowing unidirectional flow.

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@article {pmid30790045,

year = {2019},

author = {Hyeon, J and So, H},

title = {Microfabricaton of microfluidic check valves using comb-shaped moving plug for suppression of backflow in microchannel.},

journal = {Biomedical microdevices},

volume = {21},

number = {1},

pages = {19},

doi = {10.1007/s10544-019-0365-1},

pmid = {30790045},

issn = {1572-8781},

abstract = {This study reports on an efficient microscale one-way valve system that combines the physical properties of photopolymerized microstructures and viscoelastic microchannels to rectify flows with low Reynolds numbers. The comb-shaped moving plug in the microchannel prevented backflow in the closed state to ensure that the microchannel remained completely blocked in the closed state, but allowed forward flow in the open state. This microfluidic check valve was microfabricated using the combination of the soft lithography and the releasing methods with the use of a double photoresist layer to create microchannels and free-moving comb-shaped microstructures, respectively. As a result, the microfluidic check valves elicited average high-pressure differences as much as 10.75 kPa between the backward and forward flows at low Reynolds numbers of the order of 0.253, thus demonstrating efficient rectification of microfluids. This study supports the use of rectification systems for the development of biomedical devices, such as drug delivery, micropumps, and lab-on-a-chip, by allowing unidirectional flow.},

}

RevDate: 2019-03-12

**Effect of Particle Size on the Rising Behavior of Particle-Laden Bubbles.**

*Langmuir : the ACS journal of surfaces and colloids*, **35(10):**3680-3687.

The rising behavior of bubbles, initially half and fully coated with glass beads of various sizes, was investigated. The bubble velocity, aspect ratio, and oscillation periods were determined using high-speed photography and image analysis. In addition, the acting forces, drag modification factor, and modified drag coefficient were calculated and interpreted. Results show that the aspect ratio oscillation of the rising bubbles is similar, irrespective of the attached particle size. As the particle size is increased, the rising bubbles have a lower velocity and aspect ratio amplitude, with the time from release to each aspect ratio peak increasing. Higher particle coverage is shown to decrease the bubble velocity and dampen the oscillations, reducing the number of aspect ratio peaks observed. The highest rise velocities correspond to the lowest aspect ratios and vice versa, whereas a constant aspect ratio yields a constant rise velocity, independent of the particle size. Force analysis shows that the particle drag modification factor increases with the increased particle size and is greatest for fully laden bubbles. The modified drag coefficient of particle-laden bubbles increases with the increased particle size, although it decreases with the increased Reynolds number independent of the particle size. The drag force exerted by the particles plays a more dominant role in decreasing bubble velocities as the particle size increases. The results and interpretation produced a quantitative description of the behavior of rising particle-laden bubbles and the development of correlations will enhance the modeling of industrial applications.

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@article {pmid30785756,

year = {2019},

author = {Wang, P and Cilliers, JJ and Neethling, SJ and Brito-Parada, PR},

title = {Effect of Particle Size on the Rising Behavior of Particle-Laden Bubbles.},

journal = {Langmuir : the ACS journal of surfaces and colloids},

volume = {35},

number = {10},

pages = {3680-3687},

doi = {10.1021/acs.langmuir.8b04112},

pmid = {30785756},

issn = {1520-5827},

abstract = {The rising behavior of bubbles, initially half and fully coated with glass beads of various sizes, was investigated. The bubble velocity, aspect ratio, and oscillation periods were determined using high-speed photography and image analysis. In addition, the acting forces, drag modification factor, and modified drag coefficient were calculated and interpreted. Results show that the aspect ratio oscillation of the rising bubbles is similar, irrespective of the attached particle size. As the particle size is increased, the rising bubbles have a lower velocity and aspect ratio amplitude, with the time from release to each aspect ratio peak increasing. Higher particle coverage is shown to decrease the bubble velocity and dampen the oscillations, reducing the number of aspect ratio peaks observed. The highest rise velocities correspond to the lowest aspect ratios and vice versa, whereas a constant aspect ratio yields a constant rise velocity, independent of the particle size. Force analysis shows that the particle drag modification factor increases with the increased particle size and is greatest for fully laden bubbles. The modified drag coefficient of particle-laden bubbles increases with the increased particle size, although it decreases with the increased Reynolds number independent of the particle size. The drag force exerted by the particles plays a more dominant role in decreasing bubble velocities as the particle size increases. The results and interpretation produced a quantitative description of the behavior of rising particle-laden bubbles and the development of correlations will enhance the modeling of industrial applications.},

}

RevDate: 2019-03-12

**Experimental Convection Heat Transfer Analysis of a Nano-Enhanced Industrial Coolant.**

*Nanomaterials (Basel, Switzerland)*, **9(2):** pii:nano9020267.

Convection heat transfer coefficients and pressure drops of four functionalized graphene nanoplatelet nanofluids based on the commercial coolant Havoline® XLC Pre-mixed 50/50 were experimentally determined to assess its thermal performance. The potential heat transfer enhancement produced by nanofluids could play an important role in increasing the efficiency of cooling systems. Particularly in wind power, the increasing size of the wind turbines, up to 10 MW nowadays, requires sophisticated liquid cooling systems to keep the nominal temperature conditions and protect the components from temperature degradation and hazardous environment in off-shore wind parks. The effect of nanoadditive loading, temperature and Reynolds number in convection heat transfer coefficients and pressure drops is discussed. A dimensionless analysis of the results is carried out and empirical correlations for the Nusselt number and Darcy friction factor are proposed. A maximum enhancement in the convection heat transfer coefficient of 7% was found for the nanofluid with nanoadditive loading of 0.25 wt %. Contrarily, no enhancement was found for the nanofluids of higher functionalized graphene nanoplatelet mass fraction.

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@article {pmid30781378,

year = {2019},

author = {Álvarez-Regueiro, E and Vallejo, JP and Fernández-Seara, J and Fernández, J and Lugo, L},

title = {Experimental Convection Heat Transfer Analysis of a Nano-Enhanced Industrial Coolant.},

journal = {Nanomaterials (Basel, Switzerland)},

volume = {9},

number = {2},

pages = {},

doi = {10.3390/nano9020267},

pmid = {30781378},

issn = {2079-4991},

support = {ENE2014-55489-C2-1/2-R; ENE2017-86425-C2-1/2-R//Ministerio de Economía, Industria y Competitividad, Gobierno de España/ ; },

abstract = {Convection heat transfer coefficients and pressure drops of four functionalized graphene nanoplatelet nanofluids based on the commercial coolant Havoline® XLC Pre-mixed 50/50 were experimentally determined to assess its thermal performance. The potential heat transfer enhancement produced by nanofluids could play an important role in increasing the efficiency of cooling systems. Particularly in wind power, the increasing size of the wind turbines, up to 10 MW nowadays, requires sophisticated liquid cooling systems to keep the nominal temperature conditions and protect the components from temperature degradation and hazardous environment in off-shore wind parks. The effect of nanoadditive loading, temperature and Reynolds number in convection heat transfer coefficients and pressure drops is discussed. A dimensionless analysis of the results is carried out and empirical correlations for the Nusselt number and Darcy friction factor are proposed. A maximum enhancement in the convection heat transfer coefficient of 7% was found for the nanofluid with nanoadditive loading of 0.25 wt %. Contrarily, no enhancement was found for the nanofluids of higher functionalized graphene nanoplatelet mass fraction.},

}

RevDate: 2019-03-04

CmpDate: 2019-03-04

**Flapping-mode changes and aerodynamic mechanisms in miniature insects.**

*Physical review. E*, **99(1-1):**012419.

Miniature insects fly at very low Reynolds number (Re); low Re means large viscous effect. If flapping as larger insects, sufficient vertical force cannot be produced. We measure the wing kinematics for miniature-insect species of different sizes and compute the aerodynamic forces. The planar upstroke commonly used by larger insects changes to a U-shaped upstroke, which becomes deeper as size or Re decreases. For relatively large miniature insects, the U-shaped upstroke produces a larger vertical force than a planar upstroke by having a larger wing velocity and, for very small ones, the deep U-shaped upstroke produces a large transient drag directed upwards, providing the required vertical force.

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@article {pmid30780337,

year = {2019},

author = {Lyu, YZ and Zhu, HJ and Sun, M},

title = {Flapping-mode changes and aerodynamic mechanisms in miniature insects.},

journal = {Physical review. E},

volume = {99},

number = {1-1},

pages = {012419},

doi = {10.1103/PhysRevE.99.012419},

pmid = {30780337},

issn = {2470-0053},

mesh = {*Air ; Animals ; Biomechanical Phenomena ; *Flight, Animal ; Insecta/*physiology ; },

abstract = {Miniature insects fly at very low Reynolds number (Re); low Re means large viscous effect. If flapping as larger insects, sufficient vertical force cannot be produced. We measure the wing kinematics for miniature-insect species of different sizes and compute the aerodynamic forces. The planar upstroke commonly used by larger insects changes to a U-shaped upstroke, which becomes deeper as size or Re decreases. For relatively large miniature insects, the U-shaped upstroke produces a larger vertical force than a planar upstroke by having a larger wing velocity and, for very small ones, the deep U-shaped upstroke produces a large transient drag directed upwards, providing the required vertical force.},

}

MeSH Terms:

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*Air

Animals

Biomechanical Phenomena

*Flight, Animal

Insecta/*physiology

RevDate: 2019-02-26

CmpDate: 2019-02-26

**Robustness of heat transfer in confined inclined convection at high Prandtl number.**

*Physical review. E*, **99(1-1):**013108.

We investigate the dependency of the magnitude of heat transfer in a convection cell as a function of its inclination by means of experiments and simulations. The study is performed with a working fluid of large Prandtl number, Pr≃480, and at Rayleigh numbers Ra≃10^{8} and Ra≃5×10^{8} in a quasi-two-dimensional rectangular cell with unit aspect ratio. By changing the inclination angle (β) of the convection cell, the character of the flow can be changed from moderately turbulent, for β=0^{∘}, to laminar and steady at β=90^{∘}. The global heat transfer is found to be insensitive to the drastic reduction of turbulent intensity, with maximal relative variations of the order of 20% at Ra≃10^{8} and 10% at Ra≃5×10^{8}, while the Reynolds number, based on the global root-mean-square velocity, is strongly affected with a decay of more than 85% occurring in the laminar regime. We show that the intensity of the heat flux in the turbulent regime can be only weakly enhanced by establishing a large-scale circulation flow by means of small inclinations. However, in the laminar regime the heat is transported solely by a slow large-scale circulation flow which exhibits large correlations between the velocity and temperature fields. For inclination angles close to the transition regime in-between the turbulentlike and laminar state, a quasiperiodic heat-flow bursting phenomenon is observed.

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@article {pmid30780316,

year = {2019},

author = {Jiang, L and Sun, C and Calzavarini, E},

title = {Robustness of heat transfer in confined inclined convection at high Prandtl number.},

journal = {Physical review. E},

volume = {99},

number = {1-1},

pages = {013108},

doi = {10.1103/PhysRevE.99.013108},

pmid = {30780316},

issn = {2470-0053},

abstract = {We investigate the dependency of the magnitude of heat transfer in a convection cell as a function of its inclination by means of experiments and simulations. The study is performed with a working fluid of large Prandtl number, Pr≃480, and at Rayleigh numbers Ra≃10^{8}

and Ra≃5×10^{8}

in a quasi-two-dimensional rectangular cell with unit aspect ratio. By changing the inclination angle (β) of the convection cell, the character of the flow can be changed from moderately turbulent, for β=0^{∘},

to laminar and steady at β=90^{∘}.

The global heat transfer is found to be insensitive to the drastic reduction of turbulent intensity, with maximal relative variations of the order of 20% at Ra≃10^{8}

and 10% at Ra≃5×10^{8},

while the Reynolds number, based on the global root-mean-square velocity, is strongly affected with a decay of more than 85% occurring in the laminar regime. We show that the intensity of the heat flux in the turbulent regime can be only weakly enhanced by establishing a large-scale circulation flow by means of small inclinations. However, in the laminar regime the heat is transported solely by a slow large-scale circulation flow which exhibits large correlations between the velocity and temperature fields. For inclination angles close to the transition regime in-between the turbulentlike and laminar state, a quasiperiodic heat-flow bursting phenomenon is observed.},

}

RevDate: 2019-02-26

CmpDate: 2019-02-26

**Grid sensitivity and role of error in computing a lid-driven cavity problem.**

*Physical review. E*, **99(1-1):**013305.

The investigation on grid sensitivity for the bifurcation problem of the canonical lid-driven cavity (LDC) flow results is reported here with very fine grids. This is motivated by different researchers presenting different first bifurcation critical Reynolds number (Re_{cr1}), which appears to depend on the formulation, numerical method, and choice of grid. By using a very-high-accuracy parallel algorithm, and the same method with which sequential results were presented by Lestandi et al. [Comput. Fluids 166, 86 (2018)CPFLBI0045-793010.1016/j.compfluid.2018.01.038] [for (257 × 257) and (513 × 513) uniformly spaced grid], we present results using (1025×1025) and (2049×2049) grid points. Detailed results presented using these grids help us understand the computational physics of the numerical receptivity of the LDC flow, with and without explicit excitation. The mathematical physics of the investigated problem will become apparent when we identify the roles of numerical errors with the ambient omnipresent disturbances in real physical flows as interchangeable. In physical or in numerical setups, presence of disturbances cannot be ignored. In this context, the need for explicit excitation for the used compact scheme arises for a definitive threshold amplitude, below which the flow relaxes back to quiescent state after the excitation is removed in computations. We also implement the present parallel method to show the physical aspects of primary and secondary instabilities to be maintained for other numerical schemes, and we show the results to reflect the complex physics during multiple subcritical Hopf bifurcation. Also, we relate the various sources of errors during computations that is typical of such shear-driven flow. These results, with near spectral accuracy, constitute universal benchmark results for the solution of Navier-Stokes equation for LDC.

Additional Links: PMID-30780239

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@article {pmid30780239,

year = {2019},

author = {Suman, VK and Viknesh S, S and Tekriwal, MK and Bhaumik, S and Sengupta, TK},

title = {Grid sensitivity and role of error in computing a lid-driven cavity problem.},

journal = {Physical review. E},

volume = {99},

number = {1-1},

pages = {013305},

doi = {10.1103/PhysRevE.99.013305},

pmid = {30780239},

issn = {2470-0053},

abstract = {The investigation on grid sensitivity for the bifurcation problem of the canonical lid-driven cavity (LDC) flow results is reported here with very fine grids. This is motivated by different researchers presenting different first bifurcation critical Reynolds number (Re_{cr1})

, which appears to depend on the formulation, numerical method, and choice of grid. By using a very-high-accuracy parallel algorithm, and the same method with which sequential results were presented by Lestandi et al. [Comput. Fluids 166, 86 (2018)CPFLBI0045-793010.1016/j.compfluid.2018.01.038] [for (257 × 257) and (513 × 513) uniformly spaced grid], we present results using (1025×1025) and (2049×2049) grid points. Detailed results presented using these grids help us understand the computational physics of the numerical receptivity of the LDC flow, with and without explicit excitation. The mathematical physics of the investigated problem will become apparent when we identify the roles of numerical errors with the ambient omnipresent disturbances in real physical flows as interchangeable. In physical or in numerical setups, presence of disturbances cannot be ignored. In this context, the need for explicit excitation for the used compact scheme arises for a definitive threshold amplitude, below which the flow relaxes back to quiescent state after the excitation is removed in computations. We also implement the present parallel method to show the physical aspects of primary and secondary instabilities to be maintained for other numerical schemes, and we show the results to reflect the complex physics during multiple subcritical Hopf bifurcation. Also, we relate the various sources of errors during computations that is typical of such shear-driven flow. These results, with near spectral accuracy, constitute universal benchmark results for the solution of Navier-Stokes equation for LDC.},

}

RevDate: 2019-02-26

CmpDate: 2019-02-26

**Relative importance of initial conditions on outflows from multiple fans.**

*Physical review. E*, **99(1-1):**013112.

Generation of homogeneous isotropic turbulence was attempted using an innovative "multifan wind tunnel" with 99 fans installed. The driving method used is based on a principle that the shear layers generated between outflows from the adjacent ducts lead to turbulent flow downstream. First, a signal composed of two frequency components is set, and then it is fed to all the fans for three kinds of arrangements of phases. Here, parameter N is introduced as the number of phases used for the 99 fans, which represents a variety of emanated shear layers. Furthermore, S is introduced as a measure of shear magnitude at the inlet of the test section. Relative importance of the initial conditions (N and S) in the development of turbulence was investigated. To estimate the contribution from naturally induced turbulence, we numerically decomposed the resulting velocity fluctuations into the periodic and nonperiodic component. Energy spectra for three values of N were calculated using nonperiodic data. The inertial subrange of a gradient of -5/3 widens with increasing N. The value S is the largest for N=2, but the turbulence intensity of the nonperiodic component is the largest for N=99. Hence, it might be suggested that the shear magnitude at the inlet of the test section is not as important as the variety of shear layers for effective generation of high-Reynolds-number turbulence.

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@article {pmid30780221,

year = {2019},

author = {Takamure, K and Ozono, S},

title = {Relative importance of initial conditions on outflows from multiple fans.},

journal = {Physical review. E},

volume = {99},

number = {1-1},

pages = {013112},

doi = {10.1103/PhysRevE.99.013112},

pmid = {30780221},

issn = {2470-0053},

abstract = {Generation of homogeneous isotropic turbulence was attempted using an innovative "multifan wind tunnel" with 99 fans installed. The driving method used is based on a principle that the shear layers generated between outflows from the adjacent ducts lead to turbulent flow downstream. First, a signal composed of two frequency components is set, and then it is fed to all the fans for three kinds of arrangements of phases. Here, parameter N is introduced as the number of phases used for the 99 fans, which represents a variety of emanated shear layers. Furthermore, S is introduced as a measure of shear magnitude at the inlet of the test section. Relative importance of the initial conditions (N and S) in the development of turbulence was investigated. To estimate the contribution from naturally induced turbulence, we numerically decomposed the resulting velocity fluctuations into the periodic and nonperiodic component. Energy spectra for three values of N were calculated using nonperiodic data. The inertial subrange of a gradient of -5/3 widens with increasing N. The value S is the largest for N=2, but the turbulence intensity of the nonperiodic component is the largest for N=99. Hence, it might be suggested that the shear magnitude at the inlet of the test section is not as important as the variety of shear layers for effective generation of high-Reynolds-number turbulence.},

}

RevDate: 2019-04-19

**Effects of channel morphology on nitrate retention in a headwater agricultural stream in Lake Chaohu Basin, China.**

*Environmental science and pollution research international*, **26(11):**10651-10661.

Five field tracer experiments and relevant detailed investigations of physical characterizations were conducted to investigate the effects of channel geomorphic settings on nitrate uptake efficiency on a 310-m long geomorphically distinct stream reach in a headwater agricultural stream in Hefei District, Lake Chaohu Basin. The model-fitted parameters from the one-dimensional transport with inflow and storage model were used to estimate the transient storage metric ([Formula: see text]) and determine the total nitrate uptake coefficient (k) for the study reach. And then, a nutrient spiraling approach was applied to reach-scale nitrate uptake estimates (Sw, Vf, and U). The results showed that the main channel was the major contributor to nitrate uptake retention, and the higher geomorphic complexity might result in better nitrate uptake efficiency. The partial least squares regression (PLSR) analysis showed strong correlations between the independent variables as geomorphic settings, Reynolds number and transient storage, and the dependent variables as nitrate uptake metrics, which further underscored the importance of stream physical characteristics on measurement of stream nitrate uptake.

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@article {pmid30771128,

year = {2019},

author = {Li, R and Xu, D and Yin, Q},

title = {Effects of channel morphology on nitrate retention in a headwater agricultural stream in Lake Chaohu Basin, China.},

journal = {Environmental science and pollution research international},

volume = {26},

number = {11},

pages = {10651-10661},

doi = {10.1007/s11356-019-04484-9},

pmid = {30771128},

issn = {1614-7499},

support = {Grant No. 51579061//National Natural Science Foundation of China/ ; },

abstract = {Five field tracer experiments and relevant detailed investigations of physical characterizations were conducted to investigate the effects of channel geomorphic settings on nitrate uptake efficiency on a 310-m long geomorphically distinct stream reach in a headwater agricultural stream in Hefei District, Lake Chaohu Basin. The model-fitted parameters from the one-dimensional transport with inflow and storage model were used to estimate the transient storage metric ([Formula: see text]) and determine the total nitrate uptake coefficient (k) for the study reach. And then, a nutrient spiraling approach was applied to reach-scale nitrate uptake estimates (Sw, Vf, and U). The results showed that the main channel was the major contributor to nitrate uptake retention, and the higher geomorphic complexity might result in better nitrate uptake efficiency. The partial least squares regression (PLSR) analysis showed strong correlations between the independent variables as geomorphic settings, Reynolds number and transient storage, and the dependent variables as nitrate uptake metrics, which further underscored the importance of stream physical characteristics on measurement of stream nitrate uptake.},

}

RevDate: 2019-06-03

**Characterization of blood flow patterns and endothelial shear stress during flow-mediated dilation.**

*Clinical physiology and functional imaging*, **39(4):**240-245.

INTRODUCTION: Endothelial dysfunction is considered the first step in the development of atherosclerosis. Flow-mediated dilation (FMD) has been the most common assessment of endothelial function in research but it has failed in obtaining a widespread use in clinical settings due to a lack of standardization and a large inter-subject variability. Normalization of FMD to endothelial shear stress (ESS) has been proposed to solve its technical limitations. However, studies have not considered the characteristic of the blood flow during FMD under pulsatile conditions in their ESS estimations.

METHODS: A total of 26 young healthy subjects (15 females and 11 males) underwent FMD testing. Microhematocrit measurement was used to determine blood viscosity (μ). ESS was calculated by Womersley's approximation, ESS = μ*2K*Velocity/Diameter, where K is a function of Womersley's parameter (α). Blood flow patterns were determined by critical Reynolds number. Statistical analysis included repeated measures ANOVA to detect ESS differences during FMD until peak dilation. Significance was established at P≤0.05.

RESULTS: The mean (SD) FMD% and time to peak dilation were 7·4 (3·1) % and 35 (9·3) seconds, respectively. ESS was significantly reduced during FMD until peak dilation (P<0·001). Turbulent blood flow was the only pattern observed until peak dilation in 96·15% of the sample.

CONCLUSION: Peak FMD dilation in a young healthy population is triggered mostly by high-ESS under turbulent flow conditions. Due to the pulsatile nature of blood flow and the appearance of a turbulent pattern during FMD, ESS should be estimated by Womersley's approximation rather than Poiseuille's law.

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@article {pmid30770644,

year = {2019},

author = {Morales-Acuna, F and Ochoa, L and Valencia, C and Gurovich, AN},

title = {Characterization of blood flow patterns and endothelial shear stress during flow-mediated dilation.},

journal = {Clinical physiology and functional imaging},

volume = {39},

number = {4},

pages = {240-245},

doi = {10.1111/cpf.12564},

pmid = {30770644},

issn = {1475-097X},

abstract = {INTRODUCTION: Endothelial dysfunction is considered the first step in the development of atherosclerosis. Flow-mediated dilation (FMD) has been the most common assessment of endothelial function in research but it has failed in obtaining a widespread use in clinical settings due to a lack of standardization and a large inter-subject variability. Normalization of FMD to endothelial shear stress (ESS) has been proposed to solve its technical limitations. However, studies have not considered the characteristic of the blood flow during FMD under pulsatile conditions in their ESS estimations.

METHODS: A total of 26 young healthy subjects (15 females and 11 males) underwent FMD testing. Microhematocrit measurement was used to determine blood viscosity (μ). ESS was calculated by Womersley's approximation, ESS = μ*2K*Velocity/Diameter, where K is a function of Womersley's parameter (α). Blood flow patterns were determined by critical Reynolds number. Statistical analysis included repeated measures ANOVA to detect ESS differences during FMD until peak dilation. Significance was established at P≤0.05.

RESULTS: The mean (SD) FMD% and time to peak dilation were 7·4 (3·1) % and 35 (9·3) seconds, respectively. ESS was significantly reduced during FMD until peak dilation (P<0·001). Turbulent blood flow was the only pattern observed until peak dilation in 96·15% of the sample.

CONCLUSION: Peak FMD dilation in a young healthy population is triggered mostly by high-ESS under turbulent flow conditions. Due to the pulsatile nature of blood flow and the appearance of a turbulent pattern during FMD, ESS should be estimated by Womersley's approximation rather than Poiseuille's law.},

}

RevDate: 2019-02-20

**Variations in hydrodynamic characteristics of netting panels with various twine materials, knot types, and weave patterns at small attack angles.**

*Scientific reports*, **9(1):**1923 pii:10.1038/s41598-018-35907-1.

It is essential to conduct hydrodynamic experiments for fishing gear at small attack angles along the flow direction to better understand the hydrodynamic characteristics of netting and application of gear. The hydrodynamic characteristics of netting panels made of different materials at small attack angles were investigated by a self-designed setup; this is essential for the effective use of netting on different types of gears. As confirmed by experiments, the measured drag of designed frame without netting accounted for less than 20% of the total setup drag including experimental netting and remained in a steady state under various current speeds and small attack angles, indicating that the self-designed frame setup is suitable for such trials. The drag coefficient was determined by varying the attack angle, solidity ratio, Reynolds number, knot types, weave pattern, and twine materials at small attack angles. The results indicate that the drag coefficient increased as the attack angle increased, but decreased as the solidity ratio and Reynolds number increased. The drag generated by knot accounted for 21% of the total drag of nylon (PA) netting. For braided knotless netting, the drag coefficient of PA netting was about 8.4% lower than that of polythene netting (PE) and 7% lower than that of polyester netting (PES). Compared with twined netting, the braided netting exhibited a higher resistance to flow, corresponding to higher values of drag coefficient.

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@article {pmid30760794,

year = {2019},

author = {Tang, H and Hu, F and Xu, L and Dong, S and Zhou, C and Wang, X},

title = {Variations in hydrodynamic characteristics of netting panels with various twine materials, knot types, and weave patterns at small attack angles.},

journal = {Scientific reports},

volume = {9},

number = {1},

pages = {1923},

doi = {10.1038/s41598-018-35907-1},

pmid = {30760794},

issn = {2045-2322},

support = {41506151//Guandong Natural Science Foundation/ ; },

abstract = {It is essential to conduct hydrodynamic experiments for fishing gear at small attack angles along the flow direction to better understand the hydrodynamic characteristics of netting and application of gear. The hydrodynamic characteristics of netting panels made of different materials at small attack angles were investigated by a self-designed setup; this is essential for the effective use of netting on different types of gears. As confirmed by experiments, the measured drag of designed frame without netting accounted for less than 20% of the total setup drag including experimental netting and remained in a steady state under various current speeds and small attack angles, indicating that the self-designed frame setup is suitable for such trials. The drag coefficient was determined by varying the attack angle, solidity ratio, Reynolds number, knot types, weave pattern, and twine materials at small attack angles. The results indicate that the drag coefficient increased as the attack angle increased, but decreased as the solidity ratio and Reynolds number increased. The drag generated by knot accounted for 21% of the total drag of nylon (PA) netting. For braided knotless netting, the drag coefficient of PA netting was about 8.4% lower than that of polythene netting (PE) and 7% lower than that of polyester netting (PES). Compared with twined netting, the braided netting exhibited a higher resistance to flow, corresponding to higher values of drag coefficient.},

}

RevDate: 2019-02-13

**The Effectiveness of An Averaged Airway Model in Predicting the Airflow and Particle Transport Through the Airway.**

*Journal of aerosol medicine and pulmonary drug delivery* [Epub ahead of print].

BACKGROUND: In this study, we proposed an averaged airway model design based on four healthy subjects and numerically evaluated its effectiveness for predicting the airflow and particle transport through an airway.

METHODS: Direct-averaged models of the conducting airways of four subjects were restored by averaging the three-dimensional (3D) skeletons of four healthy airways, which were calculated using an inverse 3D thinning algorithm. We simulated the airflow and particle transport in the individual and the averaged airway models using computational fluid dynamics.

RESULTS: The bifurcation geometry differs even among healthy subjects, but the averaged model retains the typical geometrical characteristics of the airways. The Reynolds number of the averaged model varied within the range found in the individual subject models, and the averaged model had similar inspiratory flow characteristics as the individual subject models. The deposition fractions at almost all individual lobes ranged within the variation observed in the subjects, however, the deposition fraction was higher in only one lobe. The deposition distribution at the main bifurcation point differed among the healthy subjects, but the characteristics of the averaged model fell within the variation observed in the individual subject models. On the contrary, the deposition fraction of the averaged model was higher than that of the average of the individual subject models and deviated from the range observed in the subject models.

CONCLUSION: These results indicate that the direct-averaged model may be useful for predicting the individual airflow and particle transport on a macroscopic scale.

Additional Links: PMID-30759039

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@article {pmid30759039,

year = {2019},

author = {Sera, T and Kuninaga, H and Fukasaku, K and Yokota, H and Tanaka, M},

title = {The Effectiveness of An Averaged Airway Model in Predicting the Airflow and Particle Transport Through the Airway.},

journal = {Journal of aerosol medicine and pulmonary drug delivery},

volume = {},

number = {},

pages = {},

doi = {10.1089/jamp.2018.1500},

pmid = {30759039},

issn = {1941-2703},

abstract = {BACKGROUND: In this study, we proposed an averaged airway model design based on four healthy subjects and numerically evaluated its effectiveness for predicting the airflow and particle transport through an airway.

METHODS: Direct-averaged models of the conducting airways of four subjects were restored by averaging the three-dimensional (3D) skeletons of four healthy airways, which were calculated using an inverse 3D thinning algorithm. We simulated the airflow and particle transport in the individual and the averaged airway models using computational fluid dynamics.

RESULTS: The bifurcation geometry differs even among healthy subjects, but the averaged model retains the typical geometrical characteristics of the airways. The Reynolds number of the averaged model varied within the range found in the individual subject models, and the averaged model had similar inspiratory flow characteristics as the individual subject models. The deposition fractions at almost all individual lobes ranged within the variation observed in the subjects, however, the deposition fraction was higher in only one lobe. The deposition distribution at the main bifurcation point differed among the healthy subjects, but the characteristics of the averaged model fell within the variation observed in the individual subject models. On the contrary, the deposition fraction of the averaged model was higher than that of the average of the individual subject models and deviated from the range observed in the subject models.

CONCLUSION: These results indicate that the direct-averaged model may be useful for predicting the individual airflow and particle transport on a macroscopic scale.},

}

RevDate: 2019-03-15

**Using CFD simulations and statistical analysis to correlate oxygen mass transfer coefficient to both geometrical parameters and operating conditions in a stirred-tank bioreactor.**

*Biotechnology progress* [Epub ahead of print].

Optimization of a bioreactor design can be an especially challenging process. For instance, testing different bioreactor vessel geometries and different impeller and sparger types, locations, and dimensions can lead to an exceedingly large number of configurations and necessary experiments. Computational fluid dynamics (CFD), therefore, has been widely used to model multiphase flow in stirred-tank bioreactors to minimize the number of optimization experiments. In this study, a multiphase CFD model with population balance equations are used to model gas-liquid mixing, as well as gas bubble distribution, in a 50 L single-use bioreactor vessel. The vessel is the larger chamber in an early prototype of a multichamber bioreactor for mammalian cell culture. The model results are validated with oxygen mass transfer coefficient (kL a) measurements within the prototype. The validated model is projected to predict the effect of using ring or pipe spargers of different sizes and the effect of varying the impeller diameter on kL a. The simulations show that ring spargers result in a superior kL a compared to pipe spargers, with an optimum sparger-to-impeller diameter ratio of 0.8. In addition, larger impellers are shown to improve kL a. A correlation of kL a is presented as a function of both the reactor geometry (i.e., sparger-to-impeller diameter ratio and impeller-to-vessel diameter ratio) and operating conditions (i.e., Reynolds number and gas flow rate). The resulting correlation can be used to predict kL a in a bioreactor and to optimize its design, geometry, and operating conditions.

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@article {pmid30758910,

year = {2019},

author = {Amer, M and Feng, Y and Ramsey, JD},

title = {Using CFD simulations and statistical analysis to correlate oxygen mass transfer coefficient to both geometrical parameters and operating conditions in a stirred-tank bioreactor.},

journal = {Biotechnology progress},

volume = {},

number = {},

pages = {e2785},

doi = {10.1002/btpr.2785},

pmid = {30758910},

issn = {1520-6033},

abstract = {Optimization of a bioreactor design can be an especially challenging process. For instance, testing different bioreactor vessel geometries and different impeller and sparger types, locations, and dimensions can lead to an exceedingly large number of configurations and necessary experiments. Computational fluid dynamics (CFD), therefore, has been widely used to model multiphase flow in stirred-tank bioreactors to minimize the number of optimization experiments. In this study, a multiphase CFD model with population balance equations are used to model gas-liquid mixing, as well as gas bubble distribution, in a 50 L single-use bioreactor vessel. The vessel is the larger chamber in an early prototype of a multichamber bioreactor for mammalian cell culture. The model results are validated with oxygen mass transfer coefficient (kL a) measurements within the prototype. The validated model is projected to predict the effect of using ring or pipe spargers of different sizes and the effect of varying the impeller diameter on kL a. The simulations show that ring spargers result in a superior kL a compared to pipe spargers, with an optimum sparger-to-impeller diameter ratio of 0.8. In addition, larger impellers are shown to improve kL a. A correlation of kL a is presented as a function of both the reactor geometry (i.e., sparger-to-impeller diameter ratio and impeller-to-vessel diameter ratio) and operating conditions (i.e., Reynolds number and gas flow rate). The resulting correlation can be used to predict kL a in a bioreactor and to optimize its design, geometry, and operating conditions.},

}

RevDate: 2019-02-14

**Adaptive locomotion of artificial microswimmers.**

*Science advances*, **5(1):**eaau1532 pii:aau1532.

Bacteria can exploit mechanics to display remarkable plasticity in response to locally changing physical and chemical conditions. Compliant structures play a notable role in their taxis behavior, specifically for navigation inside complex and structured environments. Bioinspired mechanisms with rationally designed architectures capable of large, nonlinear deformation present opportunities for introducing autonomy into engineered small-scale devices. This work analyzes the effect of hydrodynamic forces and rheology of local surroundings on swimming at low Reynolds number, identifies the challenges and benefits of using elastohydrodynamic coupling in locomotion, and further develops a suite of machinery for building untethered microrobots with self-regulated mobility. We demonstrate that coupling the structural and magnetic properties of artificial microswimmers with the dynamic properties of the fluid leads to adaptive locomotion in the absence of on-board sensors.

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@article {pmid30746446,

year = {2019},

author = {Huang, HW and Uslu, FE and Katsamba, P and Lauga, E and Sakar, MS and Nelson, BJ},

title = {Adaptive locomotion of artificial microswimmers.},

journal = {Science advances},

volume = {5},

number = {1},

pages = {eaau1532},

doi = {10.1126/sciadv.aau1532},

pmid = {30746446},

issn = {2375-2548},

abstract = {Bacteria can exploit mechanics to display remarkable plasticity in response to locally changing physical and chemical conditions. Compliant structures play a notable role in their taxis behavior, specifically for navigation inside complex and structured environments. Bioinspired mechanisms with rationally designed architectures capable of large, nonlinear deformation present opportunities for introducing autonomy into engineered small-scale devices. This work analyzes the effect of hydrodynamic forces and rheology of local surroundings on swimming at low Reynolds number, identifies the challenges and benefits of using elastohydrodynamic coupling in locomotion, and further develops a suite of machinery for building untethered microrobots with self-regulated mobility. We demonstrate that coupling the structural and magnetic properties of artificial microswimmers with the dynamic properties of the fluid leads to adaptive locomotion in the absence of on-board sensors.},

}

RevDate: 2019-02-15

CmpDate: 2019-02-12

**Investigation of DPD transport properties in modeling bioparticle motion under the effect of external forces: Low Reynolds number and high Schmidt scenarios.**

*The Journal of chemical physics*, **150(5):**054901.

We have used a dissipative particle dynamics (DPD) model to study the movement of microparticles in a microfluidic device at extremely low Reynolds number (Re). The particles, immersed in a medium, are transported in the microchannel by a flow force and deflected transversely by an external force along the way. An in-house Fortran code is developed to simulate a two-dimensional fluid flow using DPD at Re ≥ 0.0005, which is two orders of magnitude less than the minimum Re value previously reported in the DPD literature. The DPD flow profile is verified by comparing it with the exact solution of Hagen-Poiseuille flow. A bioparticle based on a rigid spring-bead model is introduced in the DPD fluid, and the employed model is verified via comparing the velocity profile past a stationary infinite cylinder against the profile obtained via the finite element method. Moreover, the drag force and drag coefficient on the stationary cylinder are also computed and compared with the reported literature results. Dielectrophoresis (DEP) is investigated as a case study for the proposed DPD model to compute the trajectories of red blood cells in a microfluidic device. A mapping mechanism to scale the external deflecting force from the physical to DPD domain is performed. We designed and built our own experimental setup with the aim to compare the experimental trajectories of cells in a microfluidic device to validate our DPD model. These experimental results are used to investigate the dependence of the trajectory results on the Reynolds number and the Schmidt number. The numerical results agree well with the experiment results, and it is found that the Schmidt number is not a significant parameter for the current application; Reynolds numbers combined with the DEP-to-drag force ratio are the only important parameters influencing the behavior of particles inside the microchannel.

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@article {pmid30736676,

year = {2019},

author = {Waheed, W and Alazzam, A and Al-Khateeb, AN and Sung, HJ and Abu-Nada, E},

title = {Investigation of DPD transport properties in modeling bioparticle motion under the effect of external forces: Low Reynolds number and high Schmidt scenarios.},

journal = {The Journal of chemical physics},

volume = {150},

number = {5},

pages = {054901},

doi = {10.1063/1.5079835},

pmid = {30736676},

issn = {1089-7690},

abstract = {We have used a dissipative particle dynamics (DPD) model to study the movement of microparticles in a microfluidic device at extremely low Reynolds number (Re). The particles, immersed in a medium, are transported in the microchannel by a flow force and deflected transversely by an external force along the way. An in-house Fortran code is developed to simulate a two-dimensional fluid flow using DPD at Re ≥ 0.0005, which is two orders of magnitude less than the minimum Re value previously reported in the DPD literature. The DPD flow profile is verified by comparing it with the exact solution of Hagen-Poiseuille flow. A bioparticle based on a rigid spring-bead model is introduced in the DPD fluid, and the employed model is verified via comparing the velocity profile past a stationary infinite cylinder against the profile obtained via the finite element method. Moreover, the drag force and drag coefficient on the stationary cylinder are also computed and compared with the reported literature results. Dielectrophoresis (DEP) is investigated as a case study for the proposed DPD model to compute the trajectories of red blood cells in a microfluidic device. A mapping mechanism to scale the external deflecting force from the physical to DPD domain is performed. We designed and built our own experimental setup with the aim to compare the experimental trajectories of cells in a microfluidic device to validate our DPD model. These experimental results are used to investigate the dependence of the trajectory results on the Reynolds number and the Schmidt number. The numerical results agree well with the experiment results, and it is found that the Schmidt number is not a significant parameter for the current application; Reynolds numbers combined with the DEP-to-drag force ratio are the only important parameters influencing the behavior of particles inside the microchannel.},

}

RevDate: 2019-04-10

**Elastic Turbulence of Aqueous Polymer Solution in Multi-Stream Micro-Channel Flow.**

*Micromachines*, **10(2):** pii:mi10020110.

Viscous liquid flow in micro-channels is typically laminar because of the low Reynolds number constraint. However, by introducing elasticity into the fluids, the flow behavior could change drastically to become turbulent; this elasticity can be realized by dissolving small quantities of polymer molecules into an aqueous solvent. Our recent investigation has directly visualized the extension and relaxation of these polymer molecules in an aqueous solution. This elastic-driven phenomenon is known as 'elastic turbulence'. Hitherto, existing studies on elastic flow instability are mostly limited to single-stream flows, and a comprehensive statistical analysis of a multi-stream elastic turbulent micro-channel flow is needed to provide additional physical understanding. Here, we investigate the flow field characteristics of elastic turbulence in a 3-stream contraction-expansion micro-channel flow. By applying statistical analyses and flow visualization tools, we show that the flow field bares many similarities to that of inertia-driven turbulence. More interestingly, we observed regions with two different types of power-law dependence in the velocity power spectra at high frequencies. This is a typical characteristic of two-dimensional turbulence and has hitherto not been reported for elastic turbulent micro-channel flows.

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@article {pmid30736476,

year = {2019},

author = {Tai, J and Lam, YC},

title = {Elastic Turbulence of Aqueous Polymer Solution in Multi-Stream Micro-Channel Flow.},

journal = {Micromachines},

volume = {10},

number = {2},

pages = {},

doi = {10.3390/mi10020110},

pmid = {30736476},

issn = {2072-666X},

abstract = {Viscous liquid flow in micro-channels is typically laminar because of the low Reynolds number constraint. However, by introducing elasticity into the fluids, the flow behavior could change drastically to become turbulent; this elasticity can be realized by dissolving small quantities of polymer molecules into an aqueous solvent. Our recent investigation has directly visualized the extension and relaxation of these polymer molecules in an aqueous solution. This elastic-driven phenomenon is known as 'elastic turbulence'. Hitherto, existing studies on elastic flow instability are mostly limited to single-stream flows, and a comprehensive statistical analysis of a multi-stream elastic turbulent micro-channel flow is needed to provide additional physical understanding. Here, we investigate the flow field characteristics of elastic turbulence in a 3-stream contraction-expansion micro-channel flow. By applying statistical analyses and flow visualization tools, we show that the flow field bares many similarities to that of inertia-driven turbulence. More interestingly, we observed regions with two different types of power-law dependence in the velocity power spectra at high frequencies. This is a typical characteristic of two-dimensional turbulence and has hitherto not been reported for elastic turbulent micro-channel flows.},

}

RevDate: 2019-02-06

**Novel Variable Radius Spiral⁻Shaped Micromixer: From Numerical Analysis to Experimental Validation.**

*Micromachines*, **9(11):** pii:mi9110552.

A novel type of spiral micromixer with expansion and contraction parts is presented in order to enhance the mixing quality in the low Reynolds number regimes for point-of-care tests (POCT). Three classes of micromixers with different numbers of loops and modified geometries were studied. Numerical simulation was performed to study the flow behavior and mixing performance solving the steady-state Navier⁻Stokes and the convection-diffusion equations in the Reynolds range of 0.1⁻10.0. Comparisons between the mixers with and without expansion parts were made to illustrate the effect of disturbing the streamlines on the mixing performance. Image analysis of the mixing results from fabricated micromixers was used to verify the results of the simulations. Since the proposed mixer provides up to 92% of homogeneity at Re 1.0, generating 442 Pa of pressure drop, this mixer makes a suitable candidate for research in the POCT field.

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@article {pmid30715051,

year = {2018},

author = {Mehrdel, P and Karimi, S and Farré-Lladós, J and Casals-Terré, J},

title = {Novel Variable Radius Spiral⁻Shaped Micromixer: From Numerical Analysis to Experimental Validation.},

journal = {Micromachines},

volume = {9},

number = {11},

pages = {},

doi = {10.3390/mi9110552},

pmid = {30715051},

issn = {2072-666X},

abstract = {A novel type of spiral micromixer with expansion and contraction parts is presented in order to enhance the mixing quality in the low Reynolds number regimes for point-of-care tests (POCT). Three classes of micromixers with different numbers of loops and modified geometries were studied. Numerical simulation was performed to study the flow behavior and mixing performance solving the steady-state Navier⁻Stokes and the convection-diffusion equations in the Reynolds range of 0.1⁻10.0. Comparisons between the mixers with and without expansion parts were made to illustrate the effect of disturbing the streamlines on the mixing performance. Image analysis of the mixing results from fabricated micromixers was used to verify the results of the simulations. Since the proposed mixer provides up to 92% of homogeneity at Re 1.0, generating 442 Pa of pressure drop, this mixer makes a suitable candidate for research in the POCT field.},

}

RevDate: 2019-03-04

CmpDate: 2019-03-04

**A flowing pair of particles in inertial microfluidics.**

*Soft matter*, **15(9):**1988-1998.

A flowing pair of particles in inertial microfluidics gives important insights into understanding and controlling the collective dynamics of particles like cells or droplets in microfluidic devices. They are applied in medical cell analysis and engineering. We study the dynamics of a pair of solid particles flowing through a rectangular microchannel using lattice Boltzmann simulations. We determine the inertial lift force profiles as a function of the two particle positions, their axial distance, and the Reynolds number. Generally, the profiles strongly differ between particles leading and lagging in flow and the lift forces are enhanced due to the presence of a second particle. At small axial distances, they are determined by viscous forces, while inertial forces dominate at large separations. We identify cross-streamline pairs as stable fixed points in the lift force profiles and argue that same-streamline configurations are only one-sided stable. Depending on the initial conditions, the two-particle lift forces in combination with the Poiseuille flow give rise to three types of unbound particle trajectories, called moving-apart, passing, and swapping, and one type of bound trajectory, where the particles perform damped oscillations towards the cross-stream line configuration. The damping rate scales with Reynolds number squared, since inertial forces are responsible for driving the particles to their steady-state positions.

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@article {pmid30714602,

year = {2019},

author = {Schaaf, C and Rühle, F and Stark, H},

title = {A flowing pair of particles in inertial microfluidics.},

journal = {Soft matter},

volume = {15},

number = {9},

pages = {1988-1998},

doi = {10.1039/c8sm02476f},

pmid = {30714602},

issn = {1744-6848},

abstract = {A flowing pair of particles in inertial microfluidics gives important insights into understanding and controlling the collective dynamics of particles like cells or droplets in microfluidic devices. They are applied in medical cell analysis and engineering. We study the dynamics of a pair of solid particles flowing through a rectangular microchannel using lattice Boltzmann simulations. We determine the inertial lift force profiles as a function of the two particle positions, their axial distance, and the Reynolds number. Generally, the profiles strongly differ between particles leading and lagging in flow and the lift forces are enhanced due to the presence of a second particle. At small axial distances, they are determined by viscous forces, while inertial forces dominate at large separations. We identify cross-streamline pairs as stable fixed points in the lift force profiles and argue that same-streamline configurations are only one-sided stable. Depending on the initial conditions, the two-particle lift forces in combination with the Poiseuille flow give rise to three types of unbound particle trajectories, called moving-apart, passing, and swapping, and one type of bound trajectory, where the particles perform damped oscillations towards the cross-stream line configuration. The damping rate scales with Reynolds number squared, since inertial forces are responsible for driving the particles to their steady-state positions.},

}

RevDate: 2019-05-20

**Impact of ultrasound-induced cavitation on the fluid dynamics of water and sewage sludge in ultrasonic flatbed reactors.**

*Ultrasonics sonochemistry*, **55:**217-222.

The fluid dynamics of water, thickened waste activated sludge (WAS, total solids concentration 4.4%) and digested sludge (DS, total solids concentration 2.5%) within a lab-scale ultrasonic flatbed reactor were experimentally investigated. For a visual observation of the opaque sludge flow, sewage sludges were approximated by transparent xanthan solutions with identical flow behavior. The visualization of the flow was realized by use of an ultrasonic reactor with a transparent panel and dye streams injected into the flow. Without ultrasonic treatment, xanthan solutions showed distinct laminar flow behavior (generalized Reynolds numbers < 1), at a flow rate of 100 L/h. In water, dye streams remained coherent as well, but with slightly unsteady features (Reynolds number ∼ 350). Activation of the ultrasound reactor caused strong fluid dynamic disturbance in the water flow and dye streams were dissolved instantly, thus indicating turbulent mixing. For the xanthan solutions, however, mixing was considerably less pronounced. The dye streams in the DS substitute (0.5% xanthan solution) remained overall in laminar shape, but exhibited an eruption-like branching and an increase in diameter with advancing treatment duration. For the solution resembling WAS (2.0% xanthan solution), only weak dye stream disruption was observed, thus indicating that WAS flow in flatbed reactors is nearly laminar during ultrasonic treatment.

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@article {pmid30712849,

year = {2019},

author = {Lippert, T and Bandelin, J and Schlederer, F and Drewes, JE and Koch, K},

title = {Impact of ultrasound-induced cavitation on the fluid dynamics of water and sewage sludge in ultrasonic flatbed reactors.},

journal = {Ultrasonics sonochemistry},

volume = {55},

number = {},

pages = {217-222},

doi = {10.1016/j.ultsonch.2019.01.024},

pmid = {30712849},

issn = {1873-2828},

abstract = {The fluid dynamics of water, thickened waste activated sludge (WAS, total solids concentration 4.4%) and digested sludge (DS, total solids concentration 2.5%) within a lab-scale ultrasonic flatbed reactor were experimentally investigated. For a visual observation of the opaque sludge flow, sewage sludges were approximated by transparent xanthan solutions with identical flow behavior. The visualization of the flow was realized by use of an ultrasonic reactor with a transparent panel and dye streams injected into the flow. Without ultrasonic treatment, xanthan solutions showed distinct laminar flow behavior (generalized Reynolds numbers < 1), at a flow rate of 100 L/h. In water, dye streams remained coherent as well, but with slightly unsteady features (Reynolds number ∼ 350). Activation of the ultrasound reactor caused strong fluid dynamic disturbance in the water flow and dye streams were dissolved instantly, thus indicating turbulent mixing. For the xanthan solutions, however, mixing was considerably less pronounced. The dye streams in the DS substitute (0.5% xanthan solution) remained overall in laminar shape, but exhibited an eruption-like branching and an increase in diameter with advancing treatment duration. For the solution resembling WAS (2.0% xanthan solution), only weak dye stream disruption was observed, thus indicating that WAS flow in flatbed reactors is nearly laminar during ultrasonic treatment.},

}

RevDate: 2019-05-15

CmpDate: 2019-05-15

**Concentration-dependent viscosity and thermal radiation effects on MHD peristaltic motion of Synovial Nanofluid: Applications to rheumatoid arthritis treatment.**

*Computer methods and programs in biomedicine*, **170:**39-52.

BACKGROUND AND OBJECTIVE: The biomedical fluid which fills the Synovial joint cavity is called Synovial fluid which behaves as in the fluid classifications to Non-Newtonian fluids. Also it's described as a several micrometers thick layer among the interstitial cartilages with very low friction coefficient. Consequently, the present paper opts to investigate the influence of the concentration-dependent viscosity on Magnetohydrodynamic peristaltic flow of Synovial Nanofluid in an asymmetric channel in presence of thermal radiation effect.

METHOD: Our problem is solved for two models, in the first model which referred as Model-(I), viscosity is considered exponentially dependent on the concentration. Model-(2), Shear thinning index is considered as a function of concentration. Those models are introduced for the first time in peristaltic or Nanofluid flows literature. The governing problem is reformulated under the assumption of low Reynolds number and long wavelength. The resulting system of equations is solved numerically with the aid of Parametric ND Solve.

RESULTS: Detailed comparisons have been made between Model-(I) and Model-(2) and found unrealistic results between them. Results for velocity, temperature and nanoparticle concentration distributions as well as pressure gradient and pressure rise are offered graphically for different values of various physical parameters.

CONCLUSIONS: Such models are applicable to rheumatoid arthritis (RA) treatment. Rheumatoid arthritis patients can be treated by applying the magnetic field on an electrically conducting fluid, due to the movement of the ions within the cell which accelerates the metabolism of fluids.

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@article {pmid30712603,

year = {2019},

author = {Ibrahim, MG and Hasona, WM and ElShekhipy, AA},

title = {Concentration-dependent viscosity and thermal radiation effects on MHD peristaltic motion of Synovial Nanofluid: Applications to rheumatoid arthritis treatment.},

journal = {Computer methods and programs in biomedicine},

volume = {170},

number = {},

pages = {39-52},

doi = {10.1016/j.cmpb.2019.01.001},

pmid = {30712603},

issn = {1872-7565},

mesh = {Algorithms ; Arthritis, Rheumatoid/*physiopathology/*radiotherapy ; Humans ; Models, Statistical ; *Nanoparticles ; Peristalsis/*radiation effects ; Synovial Fluid/*radiation effects ; Viscosity/*radiation effects ; },

abstract = {BACKGROUND AND OBJECTIVE: The biomedical fluid which fills the Synovial joint cavity is called Synovial fluid which behaves as in the fluid classifications to Non-Newtonian fluids. Also it's described as a several micrometers thick layer among the interstitial cartilages with very low friction coefficient. Consequently, the present paper opts to investigate the influence of the concentration-dependent viscosity on Magnetohydrodynamic peristaltic flow of Synovial Nanofluid in an asymmetric channel in presence of thermal radiation effect.

METHOD: Our problem is solved for two models, in the first model which referred as Model-(I), viscosity is considered exponentially dependent on the concentration. Model-(2), Shear thinning index is considered as a function of concentration. Those models are introduced for the first time in peristaltic or Nanofluid flows literature. The governing problem is reformulated under the assumption of low Reynolds number and long wavelength. The resulting system of equations is solved numerically with the aid of Parametric ND Solve.

RESULTS: Detailed comparisons have been made between Model-(I) and Model-(2) and found unrealistic results between them. Results for velocity, temperature and nanoparticle concentration distributions as well as pressure gradient and pressure rise are offered graphically for different values of various physical parameters.

CONCLUSIONS: Such models are applicable to rheumatoid arthritis (RA) treatment. Rheumatoid arthritis patients can be treated by applying the magnetic field on an electrically conducting fluid, due to the movement of the ions within the cell which accelerates the metabolism of fluids.},

}

MeSH Terms:

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Algorithms

Arthritis, Rheumatoid/*physiopathology/*radiotherapy

Humans

Models, Statistical

*Nanoparticles

Peristalsis/*radiation effects

Synovial Fluid/*radiation effects

Viscosity/*radiation effects

RevDate: 2019-05-08

CmpDate: 2019-05-08

**Drag coefficient estimates from coasting bluegill sunfish Lepomis macrochirus.**

*Journal of fish biology*, **94(3):**532-534.

The drag coefficient bluegill sunfish Lepomis macrochirus was estimated from coasting deceleration as (mean ± SD) 0.0154 ± 0.0070 at a Reynolds number of 41,000 ± 14,000. This was within the coasting range in other species and lower than values obtained from dead drag measurements in this species and others. Low momentum losses during coasting may allow its use during intermittent propulsion to modulate power output or maximize energy economy.

Additional Links: PMID-30671967

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@article {pmid30671967,

year = {2019},

author = {Tandler, T and Gellman, E and De La Cruz, D and Ellerby, DJ},

title = {Drag coefficient estimates from coasting bluegill sunfish Lepomis macrochirus.},

journal = {Journal of fish biology},

volume = {94},

number = {3},

pages = {532-534},

doi = {10.1111/jfb.13906},

pmid = {30671967},

issn = {1095-8649},

support = {IOS1354274//NSF/ ; IOS1754650//NSF/ ; 1354274//Division of Integrative Organismal Systems/ ; 1754650//Division of Integrative Organismal Systems/ ; },

mesh = {Animals ; Biomechanical Phenomena ; Perciformes/*physiology ; *Swimming ; },

abstract = {The drag coefficient bluegill sunfish Lepomis macrochirus was estimated from coasting deceleration as (mean ± SD) 0.0154 ± 0.0070 at a Reynolds number of 41,000 ± 14,000. This was within the coasting range in other species and lower than values obtained from dead drag measurements in this species and others. Low momentum losses during coasting may allow its use during intermittent propulsion to modulate power output or maximize energy economy.},

}

MeSH Terms:

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Animals

Biomechanical Phenomena

Perciformes/*physiology

*Swimming

RevDate: 2019-03-04

CmpDate: 2019-03-04

**Flow of wormlike micellar solutions around microfluidic cylinders with high aspect ratio and low blockage ratio.**

*Soft matter*, **15(9):**1927-1941.

We employ time-resolved flow velocimetry and birefringence imaging methods to study the flow of a well-characterized shear-banding wormlike micellar solution around a novel glass-fabricated microfluidic circular cylinder. In contrast with typical microfluidic cylinders, our geometry is characterized by a high aspect ratio α = H/W = 5 and a low blockage ratio β = 2r/W = 0.1, where H and W are the channel height and width, and the cylinder radius r = 20 μm. The small cylinder radius allows access up to very high Weissenberg numbers 1.9 ≤ Wi = λMU/r ≤ 3750 (where λM is the Maxwell relaxation time) while inertial effects remain entirely negligible (Reynolds number, Re < 10-4). At low Wi values, the flow remains steady and symmetric and a birefringent region (indicating micellar alignment and tensile stress) develops downstream of the cylinder. Above a critical value Wic ≈ 60 the flow transitions to a steady asymmetric state, characterized as a supercritical pitchfork bifurcation, in which the fluid takes a preferential path around one side of the cylinder. At a second critical value Wic2 ≈ 130, the flow becomes time-dependent, with a characteristic frequency f0 ≈ 1/λM. This initial transition to time dependence has characteristics of a subcritical Hopf bifurcation. Power spectra of the measured fluctuations become complex as Wi is increased further, showing a gradual slowing down of the dynamics and emergence of harmonics. A final transition at very high Wic3 corresponds to the re-emergence of a single peak in the power spectrum but at much higher frequency. We discuss this in terms of possible flow-induced breakage of micelles into shorter species with a faster relaxation time.

Additional Links: PMID-30657156

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@article {pmid30657156,

year = {2019},

author = {Haward, SJ and Kitajima, N and Toda-Peters, K and Takahashi, T and Shen, AQ},

title = {Flow of wormlike micellar solutions around microfluidic cylinders with high aspect ratio and low blockage ratio.},

journal = {Soft matter},

volume = {15},

number = {9},

pages = {1927-1941},

doi = {10.1039/c8sm02099j},

pmid = {30657156},

issn = {1744-6848},

abstract = {We employ time-resolved flow velocimetry and birefringence imaging methods to study the flow of a well-characterized shear-banding wormlike micellar solution around a novel glass-fabricated microfluidic circular cylinder. In contrast with typical microfluidic cylinders, our geometry is characterized by a high aspect ratio α = H/W = 5 and a low blockage ratio β = 2r/W = 0.1, where H and W are the channel height and width, and the cylinder radius r = 20 μm. The small cylinder radius allows access up to very high Weissenberg numbers 1.9 ≤ Wi = λMU/r ≤ 3750 (where λM is the Maxwell relaxation time) while inertial effects remain entirely negligible (Reynolds number, Re < 10-4). At low Wi values, the flow remains steady and symmetric and a birefringent region (indicating micellar alignment and tensile stress) develops downstream of the cylinder. Above a critical value Wic ≈ 60 the flow transitions to a steady asymmetric state, characterized as a supercritical pitchfork bifurcation, in which the fluid takes a preferential path around one side of the cylinder. At a second critical value Wic2 ≈ 130, the flow becomes time-dependent, with a characteristic frequency f0 ≈ 1/λM. This initial transition to time dependence has characteristics of a subcritical Hopf bifurcation. Power spectra of the measured fluctuations become complex as Wi is increased further, showing a gradual slowing down of the dynamics and emergence of harmonics. A final transition at very high Wic3 corresponds to the re-emergence of a single peak in the power spectrum but at much higher frequency. We discuss this in terms of possible flow-induced breakage of micelles into shorter species with a faster relaxation time.},

}

RevDate: 2019-02-06

**Magnetically Induced Flow Focusing of Non-Magnetic Microparticles in Ferrofluids under Inclined Magnetic Fields.**

*Micromachines*, **10(1):** pii:mi10010056.

The ability to focus biological particles into a designated position of a microchannel is vital for various biological applications. This paper reports particle focusing under vertical and inclined magnetic fields. We analyzed the effect of the angle of rotation (θ) of the permanent magnets and the critical Reynolds number (Rec) on the particle focusing in depth. We found that a rotation angle of 10° is preferred; a particle loop has formed when Re < Rec and Rec of the inclined magnetic field is larger than that of the vertical magnetic field. We also conducted experiments with polystyrene particles (10.4 μm in diameter) to prove the calculations. Experimental results show that the focusing effectiveness improved with increasing applied magnetic field strength or decreasing inlet flow rate.

Additional Links: PMID-30650659

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@article {pmid30650659,

year = {2019},

author = {Luo, L and He, Y},

title = {Magnetically Induced Flow Focusing of Non-Magnetic Microparticles in Ferrofluids under Inclined Magnetic Fields.},

journal = {Micromachines},

volume = {10},

number = {1},

pages = {},

doi = {10.3390/mi10010056},

pmid = {30650659},

issn = {2072-666X},

support = {11502102//National Natural Science Foundation of China/ ; },

abstract = {The ability to focus biological particles into a designated position of a microchannel is vital for various biological applications. This paper reports particle focusing under vertical and inclined magnetic fields. We analyzed the effect of the angle of rotation (θ) of the permanent magnets and the critical Reynolds number (Rec) on the particle focusing in depth. We found that a rotation angle of 10° is preferred; a particle loop has formed when Re < Rec and Rec of the inclined magnetic field is larger than that of the vertical magnetic field. We also conducted experiments with polystyrene particles (10.4 μm in diameter) to prove the calculations. Experimental results show that the focusing effectiveness improved with increasing applied magnetic field strength or decreasing inlet flow rate.},

}

RevDate: 2019-01-28

CmpDate: 2019-01-28

**Steep Cliffs and Saturated Exponents in Three-Dimensional Scalar Turbulence.**

*Physical review letters*, **121(26):**264501.

The intermittency of a passive scalar advected by three-dimensional Navier-Stokes turbulence at a Taylor-scale Reynolds number of 650 is studied using direct numerical simulations on a 4096^{3} grid; the Schmidt number is unity. By measuring scalar increment moments of high orders, while ensuring statistical convergence, we provide unambiguous evidence that the scaling exponents saturate to 1.2 for moment orders beyond about 12, indicating that scalar intermittency is dominated by the most singular shocklike cliffs in the scalar field. We show that the fractal dimension of the spatial support of steep cliffs is about 1.8, whose sum with the saturation exponent value of 1.2 adds up to the space dimension of 3, thus demonstrating a deep connection between the geometry and statistics in turbulent scalar mixing. The anomaly for the fourth and sixth order moments is comparable to that in the Kraichnan model for the roughness exponent of 4/3.

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@article {pmid30636127,

year = {2018},

author = {Iyer, KP and Schumacher, J and Sreenivasan, KR and Yeung, PK},

title = {Steep Cliffs and Saturated Exponents in Three-Dimensional Scalar Turbulence.},

journal = {Physical review letters},

volume = {121},

number = {26},

pages = {264501},

doi = {10.1103/PhysRevLett.121.264501},

pmid = {30636127},

issn = {1079-7114},

abstract = {The intermittency of a passive scalar advected by three-dimensional Navier-Stokes turbulence at a Taylor-scale Reynolds number of 650 is studied using direct numerical simulations on a 4096^{3}

grid; the Schmidt number is unity. By measuring scalar increment moments of high orders, while ensuring statistical convergence, we provide unambiguous evidence that the scaling exponents saturate to 1.2 for moment orders beyond about 12, indicating that scalar intermittency is dominated by the most singular shocklike cliffs in the scalar field. We show that the fractal dimension of the spatial support of steep cliffs is about 1.8, whose sum with the saturation exponent value of 1.2 adds up to the space dimension of 3, thus demonstrating a deep connection between the geometry and statistics in turbulent scalar mixing. The anomaly for the fourth and sixth order moments is comparable to that in the Kraichnan model for the roughness exponent of 4/3.},

}

RevDate: 2019-06-07

CmpDate: 2019-06-07

**Morphological Variability Among Broods of First-Stage Blue Crab (Callinectes sapidus) Zoeae.**

*The Biological bulletin*, **235(3):**123-133.

External morphology has been shown to influence predation and locomotion of decapod larvae and is, therefore, directly related to their ability to survive and disperse. The first goal of this study was to characterize first-stage blue crab zoeal morphology and its variability across larval broods to test whether inter-brood differences in morphology exist. The second was to identify possible correlations between maternal characteristics and zoeal morphology. The offspring of 21 individuals were hatched in the laboratory, photographed, and measured. Zoeae exhibited substantial variability, with all metrics showing significant inter-brood differences. The greatest variability was seen in the zoeal abdomen, rostrum, and dorsal spine length. A principal component analysis showed no distinct clustering of broods, with variation generally driven by larger zoeae. Using observed morphology, models of drag induced by swimming and sinking also showed significant inter-brood differences, with a maximum twofold difference across broods. In contrast to trends in other decapod taxa, maternal characteristics (female carapace width and mass and egg sponge volume and mass) are not significant predictors of zoeal morphology. These results suggest that brood effects are present across a wide range of morphological characteristics and that future experiments involving Callinectes sapidus morphology or its functionality should explicitly account for inter-brood variation. Additionally, inter-brood morphological differences may result in differential predation mortality and locomotory abilities among broods.

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@article {pmid30624119,

year = {2018},

author = {Caracappa, JC and Munroe, DM},

title = {Morphological Variability Among Broods of First-Stage Blue Crab (Callinectes sapidus) Zoeae.},

journal = {The Biological bulletin},

volume = {235},

number = {3},

pages = {123-133},

doi = {10.1086/699922},

pmid = {30624119},

issn = {1939-8697},

mesh = {Animals ; Biological Variation, Population ; Brachyura/*anatomy & histology ; Female ; Larva/anatomy & histology ; Models, Biological ; Swimming ; },

abstract = {External morphology has been shown to influence predation and locomotion of decapod larvae and is, therefore, directly related to their ability to survive and disperse. The first goal of this study was to characterize first-stage blue crab zoeal morphology and its variability across larval broods to test whether inter-brood differences in morphology exist. The second was to identify possible correlations between maternal characteristics and zoeal morphology. The offspring of 21 individuals were hatched in the laboratory, photographed, and measured. Zoeae exhibited substantial variability, with all metrics showing significant inter-brood differences. The greatest variability was seen in the zoeal abdomen, rostrum, and dorsal spine length. A principal component analysis showed no distinct clustering of broods, with variation generally driven by larger zoeae. Using observed morphology, models of drag induced by swimming and sinking also showed significant inter-brood differences, with a maximum twofold difference across broods. In contrast to trends in other decapod taxa, maternal characteristics (female carapace width and mass and egg sponge volume and mass) are not significant predictors of zoeal morphology. These results suggest that brood effects are present across a wide range of morphological characteristics and that future experiments involving Callinectes sapidus morphology or its functionality should explicitly account for inter-brood variation. Additionally, inter-brood morphological differences may result in differential predation mortality and locomotory abilities among broods.},

}

MeSH Terms:

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Animals

Biological Variation, Population

Brachyura/*anatomy & histology

Female

Larva/anatomy & histology

Models, Biological

Swimming

RevDate: 2019-06-07

CmpDate: 2019-06-07

**Permanently Fused Setules Create Unusual Folding Fans Used for Swimming in Cyprid Larvae of Barnacles.**

*The Biological bulletin*, **235(3):**185-194.

Many crustacean swimming appendages carry arrays of plumose setae-exoskeletal, feather-like structures of long bristles (setae) with short branches (setules) distributed along two sides. Although closely spaced, setae are not physically interconnected. Setal arrays function during swimming as drag-based leaky paddles that push the organism through water. Barnacle cyprids, the final, non-feeding larval stage, swim with six pairs of legs (thoracopods) that open and close setal arrays in alternating high-drag power strokes and low-drag recovery strokes. While studying cyprid swimming, we found that their thoracopods contained setae permanently cross-linked by fused setules. These cuticular connections would seem highly unlikely because setae are individually produced exoskeletal secretions, and the connections imply unknown processes for the production or modification of crustacean setae. We describe the morphology and function of plumose setae on cyprids of Balanus glandula and other species across the clade Cirripedia. Setules from adjacent plumose setae are seamlessly joined at their tips and occur in three distinct linkage patterns. Thoracopods lack muscles to open and close the array; interconnected setae are instead pulled apart, producing a paddle-like fan with high drag when appendages spread laterally during power strokes. Setules are spring-like, passively closing setae into tight bundles with low drag during recovery strokes. The linked setules occur in the three main clades of the Cirripedia. This cuticular arrangement is effective in swimming, may eliminate the need for muscles to close the setal array, and may represent a unique swimming structure within the Crustacea.

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@article {pmid30624117,

year = {2018},

author = {Lamont, EI and Emlet, RB},

title = {Permanently Fused Setules Create Unusual Folding Fans Used for Swimming in Cyprid Larvae of Barnacles.},

journal = {The Biological bulletin},

volume = {235},

number = {3},

pages = {185-194},

doi = {10.1086/700084},

pmid = {30624117},

issn = {1939-8697},

mesh = {Animals ; Larva/anatomy & histology/ultrastructure ; *Swimming ; Thoracica/*anatomy & histology/ultrastructure ; },

abstract = {Many crustacean swimming appendages carry arrays of plumose setae-exoskeletal, feather-like structures of long bristles (setae) with short branches (setules) distributed along two sides. Although closely spaced, setae are not physically interconnected. Setal arrays function during swimming as drag-based leaky paddles that push the organism through water. Barnacle cyprids, the final, non-feeding larval stage, swim with six pairs of legs (thoracopods) that open and close setal arrays in alternating high-drag power strokes and low-drag recovery strokes. While studying cyprid swimming, we found that their thoracopods contained setae permanently cross-linked by fused setules. These cuticular connections would seem highly unlikely because setae are individually produced exoskeletal secretions, and the connections imply unknown processes for the production or modification of crustacean setae. We describe the morphology and function of plumose setae on cyprids of Balanus glandula and other species across the clade Cirripedia. Setules from adjacent plumose setae are seamlessly joined at their tips and occur in three distinct linkage patterns. Thoracopods lack muscles to open and close the array; interconnected setae are instead pulled apart, producing a paddle-like fan with high drag when appendages spread laterally during power strokes. Setules are spring-like, passively closing setae into tight bundles with low drag during recovery strokes. The linked setules occur in the three main clades of the Cirripedia. This cuticular arrangement is effective in swimming, may eliminate the need for muscles to close the setal array, and may represent a unique swimming structure within the Crustacea.},

}

MeSH Terms:

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Animals

Larva/anatomy & histology/ultrastructure

*Swimming

Thoracica/*anatomy & histology/ultrastructure

RevDate: 2019-01-04

**Biologically Generated Mixing in the Ocean.**

*Annual review of marine science*, **11:**215-226.

This article assesses the contribution to ocean mixing by the marine biosphere at both high and low Reynolds numbers Re= uℓ/ ν. While back-of-the-envelope estimates have suggested that swimming marine organisms might generate as much high-Reynolds-number turbulence as deep-ocean tide- and wind-generated internal waves, and that turbulent dissipation rates of O(10-5 W kg-1) (Re ∼ 105) could be produced by aggregations of organisms ranging from O(0.01 m) krill to O(10 m) cetaceans, comparable to strong wind and buoyancy forcing near the surface, microstructure measurements do not find consistently elevated dissipation associated with diel vertically migrating krill. Elevated dissipation rates are associated with schools of O(0.1- 1 m) fish but with low mixing coefficients (γ ∼ 0.002-0.02, as compared with γ ∼ 0.2 for geophysical turbulence). Likewise, viscously induced drift at low Reynolds numbers produces little mixing of temperature, solutes, dissolved nutrients, and gases when realistic swimmers and molecular scalar diffusion are taken into account. The conclusion is that, while the marine biosphere can generate turbulence, it contributes little ocean mixing compared with breaking internal gravity waves.

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@article {pmid30606096,

year = {2019},

author = {Kunze, E},

title = {Biologically Generated Mixing in the Ocean.},

journal = {Annual review of marine science},

volume = {11},

number = {},

pages = {215-226},

doi = {10.1146/annurev-marine-010318-095047},

pmid = {30606096},

issn = {1941-0611},

abstract = {This article assesses the contribution to ocean mixing by the marine biosphere at both high and low Reynolds numbers Re= uℓ/ ν. While back-of-the-envelope estimates have suggested that swimming marine organisms might generate as much high-Reynolds-number turbulence as deep-ocean tide- and wind-generated internal waves, and that turbulent dissipation rates of O(10-5 W kg-1) (Re ∼ 105) could be produced by aggregations of organisms ranging from O(0.01 m) krill to O(10 m) cetaceans, comparable to strong wind and buoyancy forcing near the surface, microstructure measurements do not find consistently elevated dissipation associated with diel vertically migrating krill. Elevated dissipation rates are associated with schools of O(0.1- 1 m) fish but with low mixing coefficients (γ ∼ 0.002-0.02, as compared with γ ∼ 0.2 for geophysical turbulence). Likewise, viscously induced drift at low Reynolds numbers produces little mixing of temperature, solutes, dissolved nutrients, and gases when realistic swimmers and molecular scalar diffusion are taken into account. The conclusion is that, while the marine biosphere can generate turbulence, it contributes little ocean mixing compared with breaking internal gravity waves.},

}

RevDate: 2019-04-15

**Aerodynamic factors affecting rebreathing in infants.**

*Journal of applied physiology (Bethesda, Md. : 1985)*, **126(4):**952-964.

The rebreathing of expire air, with high carbon dioxide and low oxygen concentrations, has long been implicated in unexplained Sudden Infant Death Syndrome (SIDS) when infants are placed to sleep in a prone (facedown) position. This study elucidates the effect of the aerodynamic parameters Reynolds number, Strouhal number, and Froude number on the percentage of expired air that is reinspired (rebreathed). A nasal module was designed that served as a simplified geometric representation of infant nostrils and placed above a hard, flat surface. Quantitative and flow visualization experiments were performed to measure rebreathing, using water as the working medium, under conditions of dynamic similarity. Different anatomic (e.g., tidal volume, nostril diameter), physiological (e.g., breathing frequency), and environmental (e.g., temperature, distance from the surface) factors were considered. Increases in Strouhal number (simultaneously faster and shallower breathing) always produced higher rebreathed percentages, because rolled-up vortices in the vicinity of the nostrils had less time to move away by self-induction. Positively and negatively buoyant flows resulted in significant rebreathing. In the latter case, consistent with a warm environment and a high percentage of rebreathed CO2, denser gas pooled in the vicinity of the nostrils. Reynolds numbers below 200 also dramatically increased rebreathing because the expired gas pooled much closer to the nostrils. These results clearly elucidated how the prone position dramatically increases rebreathing by a number of different mechanisms. Furthermore, the results offer plausible explanations of why a high-temperature environment and low birthweight are SIDS risk factors. NEW & NOTEWORTHY A fundamentally new aerodynamics-based approach to the study of rebreathing of expired air in infants is presented. Rebreathing is implicated in unexplained Sudden Infant Death Syndrome (SIDS) when infants sleep in a prone position. This is the first time that aerodynamic parameters are systematically varied and their effects on rebreathing quantified. The study provides us with a deeper understanding of the effects of breathing frequency, tidal volume (birthweight) and environmental conditions.

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@article {pmid30605404,

year = {2019},

author = {Itzhak, N and Greenblatt, D},

title = {Aerodynamic factors affecting rebreathing in infants.},

journal = {Journal of applied physiology (Bethesda, Md. : 1985)},

volume = {126},

number = {4},

pages = {952-964},

doi = {10.1152/japplphysiol.00784.2018},

pmid = {30605404},

issn = {1522-1601},

abstract = {The rebreathing of expire air, with high carbon dioxide and low oxygen concentrations, has long been implicated in unexplained Sudden Infant Death Syndrome (SIDS) when infants are placed to sleep in a prone (facedown) position. This study elucidates the effect of the aerodynamic parameters Reynolds number, Strouhal number, and Froude number on the percentage of expired air that is reinspired (rebreathed). A nasal module was designed that served as a simplified geometric representation of infant nostrils and placed above a hard, flat surface. Quantitative and flow visualization experiments were performed to measure rebreathing, using water as the working medium, under conditions of dynamic similarity. Different anatomic (e.g., tidal volume, nostril diameter), physiological (e.g., breathing frequency), and environmental (e.g., temperature, distance from the surface) factors were considered. Increases in Strouhal number (simultaneously faster and shallower breathing) always produced higher rebreathed percentages, because rolled-up vortices in the vicinity of the nostrils had less time to move away by self-induction. Positively and negatively buoyant flows resulted in significant rebreathing. In the latter case, consistent with a warm environment and a high percentage of rebreathed CO2, denser gas pooled in the vicinity of the nostrils. Reynolds numbers below 200 also dramatically increased rebreathing because the expired gas pooled much closer to the nostrils. These results clearly elucidated how the prone position dramatically increases rebreathing by a number of different mechanisms. Furthermore, the results offer plausible explanations of why a high-temperature environment and low birthweight are SIDS risk factors. NEW & NOTEWORTHY A fundamentally new aerodynamics-based approach to the study of rebreathing of expired air in infants is presented. Rebreathing is implicated in unexplained Sudden Infant Death Syndrome (SIDS) when infants sleep in a prone position. This is the first time that aerodynamic parameters are systematically varied and their effects on rebreathing quantified. The study provides us with a deeper understanding of the effects of breathing frequency, tidal volume (birthweight) and environmental conditions.},

}

RevDate: 2019-05-09

**On the representation of effective stress for computing hemolysis.**

*Biomechanics and modeling in mechanobiology*, **18(3):**665-679.

Hemolysis is a major concern in blood-circulating devices, which arises due to hydrodynamic loading on red blood cells from ambient flow environment. Hemolysis estimation models have often been used to aid hemocompatibility design. The preponderance of hemolysis models was formulated on the basis of laminar flows. However, flows in blood-circulating devices are rather complex and can be laminar, transitional or turbulent. It is an extrapolation to apply these models to turbulent flows. For the commonly used power-law models, effective stress has often been represented using Reynolds stresses for estimating hemolysis in turbulent flows. This practice tends to overpredict hemolysis. This study focused on the representation of effective stress in power-law models. Through arithmetic manipulations from Navier-Stokes equation, we showed that effective stress can be represented in terms of energy dissipation, which can be readily obtained from CFD simulations. Three cases were tested, including a capillary tube, the FDA benchmark cases of nozzle model and blood pump. The results showed that the representation of effective stress in terms of energy dissipation greatly improved the prediction of hemolysis for a wide range of flow conditions. The improvement increases as Reynolds number increases; the overprediction of hemolysis was reduced by up to two orders of magnitude.

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@article {pmid30604300,

year = {2019},

author = {Wu, P and Gao, Q and Hsu, PL},

title = {On the representation of effective stress for computing hemolysis.},

journal = {Biomechanics and modeling in mechanobiology},

volume = {18},

number = {3},

pages = {665-679},

doi = {10.1007/s10237-018-01108-y},

pmid = {30604300},

issn = {1617-7940},

support = {51406127//National Natural Science Foundation of China/ ; BK20140344//Natural Science Foundation of Jiangsu Province/ ; },

abstract = {Hemolysis is a major concern in blood-circulating devices, which arises due to hydrodynamic loading on red blood cells from ambient flow environment. Hemolysis estimation models have often been used to aid hemocompatibility design. The preponderance of hemolysis models was formulated on the basis of laminar flows. However, flows in blood-circulating devices are rather complex and can be laminar, transitional or turbulent. It is an extrapolation to apply these models to turbulent flows. For the commonly used power-law models, effective stress has often been represented using Reynolds stresses for estimating hemolysis in turbulent flows. This practice tends to overpredict hemolysis. This study focused on the representation of effective stress in power-law models. Through arithmetic manipulations from Navier-Stokes equation, we showed that effective stress can be represented in terms of energy dissipation, which can be readily obtained from CFD simulations. Three cases were tested, including a capillary tube, the FDA benchmark cases of nozzle model and blood pump. The results showed that the representation of effective stress in terms of energy dissipation greatly improved the prediction of hemolysis for a wide range of flow conditions. The improvement increases as Reynolds number increases; the overprediction of hemolysis was reduced by up to two orders of magnitude.},

}

RevDate: 2019-01-08

**A novel type of semi-active jet turbulence grid.**

*Heliyon*, **4(12):**e01026 pii:e01026.

This article describes a novel approach to generate increased turbulence levels in an incoming flow. It relies on a cost-effective and robust semi-active jet grid, equipped with flexible tubes as moving elements attached onto tube connections placed at the intersections of a fixed, regular grid. For the present study, these flexible tubes are oriented in counter-flow direction in a wind tunnel. Tube motion is governed by multiple interactions between the main flow and the jets exiting the tubes, resulting in chaotic velocity fluctuations and high turbulence intensities in the test section. After describing the structure of the turbulence generator, the turbulent properties of the airflow downstream of the grid in both passive and active modes are measured by hot-wire anemometry and compared with one another. When activating the turbulence generator, turbulence intensity, turbulent kinetic energy, and the Taylor Reynolds number are noticeably increased in comparison with the passive mode (corresponding to simple grid turbulence). Furthermore, the inertial subrange of the turbulent energy spectrum becomes wider and closely follows Kolmogorov's -5/3 law. These results show that the semi-active grid, in contrast to passive systems, is capable of producing high turbulence levels, even at low incoming flow velocity. Compared to alternatives based on actuators driven by servo-motors, the production and operation costs of the semi-active grid are very moderate and its robustness is much higher.

Additional Links: PMID-30603681

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@article {pmid30603681,

year = {2018},

author = {Szaszák, N and Roloff, C and Bordás, R and Bencs, P and Szabó, S and Thévenin, D},

title = {A novel type of semi-active jet turbulence grid.},

journal = {Heliyon},

volume = {4},

number = {12},

pages = {e01026},

doi = {10.1016/j.heliyon.2018.e01026},

pmid = {30603681},

issn = {2405-8440},

abstract = {This article describes a novel approach to generate increased turbulence levels in an incoming flow. It relies on a cost-effective and robust semi-active jet grid, equipped with flexible tubes as moving elements attached onto tube connections placed at the intersections of a fixed, regular grid. For the present study, these flexible tubes are oriented in counter-flow direction in a wind tunnel. Tube motion is governed by multiple interactions between the main flow and the jets exiting the tubes, resulting in chaotic velocity fluctuations and high turbulence intensities in the test section. After describing the structure of the turbulence generator, the turbulent properties of the airflow downstream of the grid in both passive and active modes are measured by hot-wire anemometry and compared with one another. When activating the turbulence generator, turbulence intensity, turbulent kinetic energy, and the Taylor Reynolds number are noticeably increased in comparison with the passive mode (corresponding to simple grid turbulence). Furthermore, the inertial subrange of the turbulent energy spectrum becomes wider and closely follows Kolmogorov's -5/3 law. These results show that the semi-active grid, in contrast to passive systems, is capable of producing high turbulence levels, even at low incoming flow velocity. Compared to alternatives based on actuators driven by servo-motors, the production and operation costs of the semi-active grid are very moderate and its robustness is much higher.},

}

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Robbins holds BS, MS, and PhD degrees in the life sciences. He served as a tenured faculty member in the Zoology and Biological Science departments at Michigan State University. He is currently exploring the intersection between genomics, microbial ecology, and biodiversity — an area that promises to transform our understanding of the biosphere.

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Robbins has extensive experience in college-level education: At MSU he taught introductory biology, genetics, and population genetics. At JHU, he was an instructor for a special course on biological database design. At FHCRC, he team-taught a graduate-level course on the history of genetics. At Bellevue College he taught medical informatics.

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Robbins has been involved in science administration at both the federal and the institutional levels. At NSF he was a program officer for database activities in the life sciences, at DOE he was a program officer for information infrastructure in the human genome project. At the Fred Hutchinson Cancer Research Center, he served as a vice president for fifteen years.

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Robbins has been involved with information technology since writing his first Fortran program as a college student. At NSF he was the first program officer for database activities in the life sciences. At JHU he held an appointment in the CS department and served as director of the informatics core for the Genome Data Base. At the FHCRC he was VP for Information Technology.

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While still at Michigan State, Robbins started his first publishing venture, founding a small company that addressed the short-run publishing needs of instructors in very large undergraduate classes. For more than 20 years, Robbins has been operating The Electronic Scholarly Publishing Project, a web site dedicated to the digital publishing of critical works in science, especially classical genetics.

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Robbins is well-known for his speaking abilities and is often called upon to provide keynote or plenary addresses at international meetings. For example, in July, 2012, he gave a well-received keynote address at the Global Biodiversity Informatics Congress, sponsored by GBIF and held in Copenhagen. The slides from that talk can be seen HERE.

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Robbins has been engaged with photography and design since the 1960s, when he worked for a professional photography laboratory. He now prefers digital photography and tools for their precision and reproducibility. He designed his first web site more than 20 years ago and he personally designed and implemented this web site. He engages in graphic design as a hobby.

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