@article {pmid32548727,
year = {2020},
author = {Konashev, M},
title = {Soviet genetics and the communist party: was it all bad and wrong, or none at all?.},
journal = {History and philosophy of the life sciences},
volume = {42},
number = {2},
pages = {27},
doi = {10.1007/s40656-020-00323-0},
pmid = {32548727},
issn = {1742-6316},
mesh = {Communism/*history ; Genetics/*history ; History, 20th Century ; USSR ; },
abstract = {The history of genetics and the evolutionary theory in the USSR is multidimensional. Only in the 1920s after the October Revolution, and due in large part to that Revolution, the science of genetics arose in Soviet Russia. Genetics was limited, but not obliterated in the second half of the 1950s, and was restored in the late 1960s, after the resignation of Nikita S. Khrushchev. In the subsequent period, Soviet genetics experienced a resurgence, though one not as successful as geneticists would have liked. The Communist party bodies interfered constantly, but with different consequences for the development of genetics than when the earlier periods. The main troubles for Soviet genetics occurred during the unique, well-known, most contradictory, and tragic Stalinist period. The start date for the defeat of genetics is also known-August, 1948. In the social history of science and especially in the history of evolutionary biology (including genetics) it is natural, necessary, and even expected to adopt an evolutionary approach. In particular, historians of science need to consider and explain the evolution and dependence of Soviet science in regards to the evolution of Soviet society, the Soviet state, and the Communist party. This evolutionary perspective reflects the standards of evolutionary biology, evolutionary macrosociology, and also the history of science.},
}

Communism/*history
Genetics/*history
History, 20th Century
USSR

@article {pmid32545927,
year = {2020},
author = {Pederson, T},
title = {The 50th anniversary of reverse transcriptase-and its ironic legacy in the time of coronavirus.},
journal = {FASEB journal : official publication of the Federation of American Societies for Experimental Biology},
volume = {34},
number = {6},
pages = {7219-7221},
doi = {10.1096/fj.202001010},
pmid = {32545927},
issn = {1530-6860},
mesh = {Betacoronavirus/*genetics/physiology ; History, 20th Century ; History, 21st Century ; Molecular Biology/*history ; RNA-Directed DNA Polymerase/*metabolism ; Reverse Transcriptase Polymerase Chain Reaction/history ; United States ; Virus Replication ; },
}

Betacoronavirus/*genetics/physiology
History, 20th Century
History, 21st Century
Molecular Biology/*history
RNA-Directed DNA Polymerase/*metabolism
Reverse Transcriptase Polymerase Chain Reaction/history
United States
Virus Replication

@article {pmid31522479,
year = {2019},
author = {Wilson, K and Narasimhan, V and Pham, T and Das, A and Ramsay, R and Heriot, A},
title = {Precision medicine in colorectal surgery: coming to a hospital near you.},
journal = {ANZ journal of surgery},
volume = {89},
number = {9},
pages = {995-996},
doi = {10.1111/ans.15391},
pmid = {31522479},
issn = {1445-2197},
mesh = {Antibodies, Monoclonal, Humanized/therapeutic use ; Australia/epidemiology ; Cetuximab/therapeutic use ; Circulating Tumor DNA/blood/genetics ; Colorectal Neoplasms/*metabolism/mortality/therapy ; Colorectal Surgery/*standards/statistics & numerical data ; Genomics/*methods ; History, 21st Century ; Hospitals ; Human Genome Project/*history ; Humans ; Immunotherapy/methods ; Microarray Analysis/methods ; Mitogen-Activated Protein Kinase Kinases/antagonists & inhibitors ; Mutation ; Neoadjuvant Therapy/methods ; Precision Medicine/*methods ; Predictive Value of Tests ; Proto-Oncogene Proteins p21(ras)/metabolism ; },
}

Antibodies, Monoclonal, Humanized/therapeutic use
Australia/epidemiology
Cetuximab/therapeutic use
Circulating Tumor DNA/blood/genetics
Colorectal Neoplasms/*metabolism/mortality/therapy
Colorectal Surgery/*standards/statistics & numerical data
Genomics/*methods
History, 21st Century
Hospitals
Human Genome Project/*history
Humans
Immunotherapy/methods
Microarray Analysis/methods
Mitogen-Activated Protein Kinase Kinases/antagonists & inhibitors
Mutation
Neoadjuvant Therapy/methods
Precision Medicine/*methods
Predictive Value of Tests
Proto-Oncogene Proteins p21(ras)/metabolism

@article {pmid31444855,
year = {2019},
author = {Ramamoorthy, A and Karnes, JH and Finkel, R and Blanchard, R and Pacanowski, M},
title = {Evolution of Next Generation Therapeutics: Past, Present, and Future of Precision Medicines.},
journal = {Clinical and translational science},
volume = {12},
number = {6},
pages = {560-563},
pmid = {31444855},
issn = {1752-8062},
mesh = {CRISPR-Cas Systems/genetics ; *Forecasting ; Genetic Therapy/history/methods/*trends ; History, 20th Century ; History, 21st Century ; Humans ; Pharmacogenetics/history/*trends ; Precision Medicine/history/methods/*trends ; },
}

CRISPR-Cas Systems/genetics
*Forecasting
Genetic Therapy/history/methods/*trends
History, 20th Century
History, 21st Century
Humans
Pharmacogenetics/history/*trends
Precision Medicine/history/methods/*trends

@article {pmid32541046,
year = {2020},
author = {Ravindran, S},
title = {Profile of Christopher A. Walsh.},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {117},
number = {25},
pages = {13861-13863},
pmid = {32541046},
issn = {1091-6490},
mesh = {Awards and Prizes ; Genetics/history ; History, 20th Century ; History, 21st Century ; National Academy of Sciences, U.S. ; Neurology/*history ; Neurosciences/*history ; United States ; },
}

Awards and Prizes
Genetics/history
History, 20th Century
History, 21st Century
National Academy of Sciences, U.S.
Neurology/*history
Neurosciences/*history
United States

@article {pmid31112322,
year = {2019},
author = {Saleh, MC},
title = {Interview: Maria-Carla Saleh.},
journal = {Cellular microbiology},
volume = {21},
number = {8},
pages = {e13061},
doi = {10.1111/cmi.13061},
pmid = {31112322},
issn = {1462-5822},
mesh = {Animals ; Argentina ; France ; History, 20th Century ; History, 21st Century ; Humans ; Insecta/*immunology/virology ; Molecular Biology/*history ; Virology/*history ; },
}

Animals
Argentina
France
History, 20th Century
History, 21st Century
Humans
Insecta/*immunology/virology
Molecular Biology/*history
Virology/*history

@article {pmid32437372,
year = {2020},
author = {Hermes, TR and Frachetti, MD and Voyakin, D and Yerlomaeva, AS and Beisenov, AZ and Doumani Dupuy, PN and Papin, DV and Motuzaite Matuzeviciute, G and Bayarsaikhan, J and Houle, JL and Tishkin, AA and Nebel, A and Krause-Kyora, B and Makarewicz, CA},
title = {High mitochondrial diversity of domesticated goats persisted among Bronze and Iron Age pastoralists in the Inner Asian Mountain Corridor.},
journal = {PloS one},
volume = {15},
number = {5},
pages = {e0233333},
pmid = {32437372},
issn = {1932-6203},
mesh = {Agriculture/history ; Animals ; Animals, Domestic/*genetics ; Animals, Wild/genetics ; Asia ; Cytochromes b/genetics ; DNA, Mitochondrial/*genetics ; *Domestication ; Ecosystem ; Genetic Variation ; Genetics, Population/history ; Goats/*genetics ; Haplotypes ; History, Ancient ; Middle East ; Phylogeny ; Phylogeography ; },
abstract = {Goats were initially managed in the Near East approximately 10,000 years ago and spread across Eurasia as economically productive and environmentally resilient herd animals. While the geographic origins of domesticated goats (Capra hircus) in the Near East have been long-established in the zooarchaeological record and, more recently, further revealed in ancient genomes, the precise pathways by which goats spread across Asia during the early Bronze Age (ca. 3000 to 2500 cal BC) and later remain unclear. We analyzed sequences of hypervariable region 1 and cytochrome b gene in the mitochondrial genome (mtDNA) of goats from archaeological sites along two proposed transmission pathways as well as geographically intermediary sites. Unexpectedly high genetic diversity was present in the Inner Asian Mountain Corridor (IAMC), indicated by mtDNA haplotypes representing common A lineages and rarer C and D lineages. High mtDNA diversity was also present in central Kazakhstan, while only mtDNA haplotypes of lineage A were observed from sites in the Northern Eurasian Steppe (NES). These findings suggest that herding communities living in montane ecosystems were drawing from genetically diverse goat populations, likely sourced from communities in the Iranian Plateau, that were sustained by repeated interaction and exchange. Notably, the mitochondrial genetic diversity associated with goats of the IAMC also extended into the semi-arid region of central Kazakhstan, while NES communities had goats reflecting an isolated founder population, possibly sourced via eastern Europe or the Caucasus region.},
}

Agriculture/history
Animals
Animals, Domestic/*genetics
Animals, Wild/genetics
Asia
Cytochromes b/genetics
DNA, Mitochondrial/*genetics
*Domestication
Ecosystem
Genetic Variation
Genetics, Population/history
Goats/*genetics
Haplotypes
History, Ancient
Middle East
Phylogeny
Phylogeography

@article {pmid31479345,
year = {2019},
author = {Gazzaniga, MS},
title = {Following Schrödinger's Code: A Personal Journey.},
journal = {Journal of cognitive neuroscience},
volume = {31},
number = {12},
pages = {1777-1781},
doi = {10.1162/jocn_e_01463},
pmid = {31479345},
issn = {1530-8898},
mesh = {Career Choice ; Cognition ; Cognitive Neuroscience/*history ; Consciousness ; Genetic Association Studies ; Genetic Code ; History, 20th Century ; History, 21st Century ; Humans ; *Information Theory ; *Life ; Molecular Biology/history ; Physics/history ; Symbolism ; United States ; },
abstract = {On a wintery afternoon over 60 years ago, I was browsing the Baker Library stacks at Dartmouth College and stumbled across a small book with an arresting title: What Is Life? [Schrödinger, E. What is Life? The physical aspect of the living cell and mind. Cambridge: Cambridge University Press, 1944]. This small volume contained numerous concepts that would transform the future of the biological sciences, giving rise to new fields, dogmas, approaches, and debates. Here, I present the core concepts of Schrödinger's book, the influence they have had on biology, and the influence they may continue to have on the cognitive neurosciences.},
}

Career Choice
Cognition
Cognitive Neuroscience/*history
Consciousness
Genetic Association Studies
Genetic Code
History, 20th Century
History, 21st Century
Humans
*Information Theory
*Life
Molecular Biology/history
Physics/history
Symbolism
United States

@article {pmid31235311,
year = {2019},
author = {Albert, DM},
title = {Clyde E. Keeler: The Rodless Mouse and the Early Days of Retinal Genetic Research.},
journal = {Ophthalmology. Retina},
volume = {3},
number = {9},
pages = {716-723},
doi = {10.1016/j.oret.2019.04.019},
pmid = {31235311},
issn = {2468-7219},
support = {P30 EY010572/EY/NEI NIH HHS/United States ; },
mesh = {Animals ; Cyclic Nucleotide Phosphodiesterases, Type 6/genetics ; Eugenics/history ; Eye Abnormalities/*history ; Genetic Research/*history ; History, 20th Century ; Humans ; *Mice, Mutant Strains ; Ophthalmology/*history ; *Retinal Rod Photoreceptor Cells ; Retinitis Pigmentosa/genetics/history ; },
abstract = {PURPOSE: To report the lifetime activities and accomplishments of Clyde E. Keeler (1900-1994), a pioneer in the study of retinal genetics.

DESIGN: Retrospective review.

METHODS: Assessment of published and unpublished biographical material.

RESULTS: Nearly a century ago, Keeler discovered an inherited abnormality in the mouse that causes the absence of rod photoreceptors and is the mouse counterpart of 1 type of human retinitis pigmentosa.

CONCLUSIONS: In 1923, Keeler serendipitously discovered the so-called rodless mouse, which is now known to be the result of a mutation in the PDEGB gene. The historical name for the mouse strain is rd. This same defect was reported in human patients with retinitis pigmentosa in 1993. Keeler's mouse model is still used in gene therapy studies seeking to cure retinitis pigmentosa.},
}

Animals
Cyclic Nucleotide Phosphodiesterases, Type 6/genetics
Eugenics/history
Eye Abnormalities/*history
Genetic Research/*history
History, 20th Century
Humans
*Mice, Mutant Strains
Ophthalmology/*history
*Retinal Rod Photoreceptor Cells
Retinitis Pigmentosa/genetics/history

@article {pmid31654669,
year = {2020},
author = {de Wit, E},
title = {TADs as the Caller Calls Them.},
journal = {Journal of molecular biology},
volume = {432},
number = {3},
pages = {638-642},
doi = {10.1016/j.jmb.2019.09.026},
pmid = {31654669},
issn = {1089-8638},
mesh = {Chromatin/*chemistry/*metabolism ; Gene Expression Regulation ; History, 21st Century ; Macromolecular Substances/*chemistry/*metabolism ; Molecular Biology/*history/trends ; *Molecular Conformation ; },
abstract = {Developments in proximity ligation methods and sequencing technologies have provided high-resolution views of the organization of the genome inside the nucleus. A prominent feature of Hi-C maps is regions of increased self-interaction called topologically associating domains (TADs). Despite the strong evolutionary conservation and clear link with gene expression, the exact role of TADs and even their definition remains debatable. Here, I review the discovery of TADs, how they are commonly identified, and the mechanisms that lead to their formation. Furthermore, I discuss recent results that have created a more nuanced view of the role of TADs in the regulation of genes. In light of this, I propose that when we define TADs, we also consider the mechanisms that shape them.},
}

Chromatin/*chemistry/*metabolism
Gene Expression Regulation
History, 21st Century
Macromolecular Substances/*chemistry/*metabolism
Molecular Biology/*history/trends
*Molecular Conformation

@article {pmid32313080,
year = {2020},
author = {Furtwängler, A and Rohrlach, AB and Lamnidis, TC and Papac, L and Neumann, GU and Siebke, I and Reiter, E and Steuri, N and Hald, J and Denaire, A and Schnitzler, B and Wahl, J and Ramstein, M and Schuenemann, VJ and Stockhammer, PW and Hafner, A and Lösch, S and Haak, W and Schiffels, S and Krause, J},
title = {Ancient genomes reveal social and genetic structure of Late Neolithic Switzerland.},
journal = {Nature communications},
volume = {11},
number = {1},
pages = {1915},
pmid = {32313080},
issn = {2041-1723},
mesh = {Archaeology ; *DNA, Ancient ; DNA, Mitochondrial/genetics ; Europe ; European Continental Ancestry Group/genetics ; *Evolution, Molecular ; France ; Genetics, Population/*history ; Genome, Human/*genetics ; Germany ; History, Ancient ; Humans ; Switzerland ; },
abstract = {Genetic studies of Neolithic and Bronze Age skeletons from Europe have provided evidence for strong population genetic changes at the beginning and the end of the Neolithic period. To further understand the implications of these in Southern Central Europe, we analyze 96 ancient genomes from Switzerland, Southern Germany, and the Alsace region in France, covering the Middle/Late Neolithic to Early Bronze Age. Similar to previously described genetic changes in other parts of Europe from the early 3rd millennium BCE, we detect an arrival of ancestry related to Late Neolithic pastoralists from the Pontic-Caspian steppe in Switzerland as early as 2860-2460 calBCE. Our analyses suggest that this genetic turnover was a complex process lasting almost 1000 years and involved highly genetically structured populations in this region.},
}

Archaeology
*DNA, Ancient
DNA, Mitochondrial/genetics
Europe
European Continental Ancestry Group/genetics
*Evolution, Molecular
France
Genetics, Population/*history
Genome, Human/*genetics
Germany
History, Ancient
Humans
Switzerland

@article {pmid31321866,
year = {2019},
author = {Hudgins, L},
title = {Annemarie Sommer memorial.},
journal = {American journal of medical genetics. Part A},
volume = {179},
number = {9},
pages = {1689-1690},
doi = {10.1002/ajmg.a.61287},
pmid = {31321866},
issn = {1552-4833},
mesh = {Female ; Genetics, Medical/*history ; History, 20th Century ; History, 21st Century ; Humans ; Pediatrics/*history ; },
}

Female
Genetics, Medical/*history
History, 20th Century
History, 21st Century
Humans
Pediatrics/*history

@article {pmid30780130,
year = {2019},
author = {Richards, JS},
title = {WOMEN IN REPRODUCTIVE SCIENCE: Discovering science and the ovary: a career of joy.},
journal = {Reproduction (Cambridge, England)},
volume = {158},
number = {6},
pages = {F69-F80},
pmid = {30780130},
issn = {1741-7899},
support = {R56 HD016229/HD/NICHD NIH HHS/United States ; R01 CA181808/CA/NCI NIH HHS/United States ; R37 HD016229/HD/NICHD NIH HHS/United States ; R01 HD016272/HD/NICHD NIH HHS/United States ; R01 HD016229/HD/NICHD NIH HHS/United States ; R01 HD076980/HD/NICHD NIH HHS/United States ; },
mesh = {Animals ; Biomedical Research/*history ; *Disease Models, Animal ; Female ; History, 20th Century ; History, 21st Century ; Humans ; Molecular Biology/*history ; Ovarian Neoplasms/*physiopathology ; Ovary/cytology/*physiology ; *Reproduction ; United States ; },
abstract = {My career has been about discovering science and learning the joys of the discovery process itself. It has been a challenging but rewarding process filled with many exciting moments and wonderful colleagues and students. Although I went to college to become a French major, I ultimately stumbled into research while pursuing a Masters Degree in teaching. Thus, my research career began in graduate school where I was studying NAD kinase in the ovary as a possible regulator of steroidogenesis, a big issue in the late 1960s. After a short excursion of teaching in North Dakota, I became a postdoctoral fellow at the University of Michigan, where radio-immuno assays and radio receptor assays had just come on the scene and were transforming endocrinology from laborious bioassays to quantitative science and of course these assays related to the ovary. From there I went to Baylor College of Medicine, a mecca of molecular biology, cloning genes and generating mouse models. It has been a fascinating and joyous journey.},
}

Animals
Biomedical Research/*history
*Disease Models, Animal
Female
History, 20th Century
History, 21st Century
Humans
Molecular Biology/*history
Ovarian Neoplasms/*physiopathology
Ovary/cytology/*physiology
*Reproduction
United States

@article {pmid31262965,
year = {2019},
author = {Kumar, P and Nagarajan, A and Uchil, PD},
title = {Electroporation.},
journal = {Cold Spring Harbor protocols},
volume = {2019},
number = {7},
pages = {},
doi = {10.1101/pdb.top096271},
pmid = {31262965},
issn = {1559-6095},
mesh = {Electroporation/history/*methods ; *Gene Transfer Techniques/history ; History, 20th Century ; History, 21st Century ; Molecular Biology/history/*methods ; },
abstract = {Electroporation is a process in which brief electrical pulses create transient pores in the plasma membrane that allow nucleic acids to enter the cellular cytoplasm. Here, we provide information on the history, mechanism, and optimization of electroporation. We also describe nucleofection, an improvement of the electroporation technology that permits the introduction of nucleic acids directly into the nucleus.},
}

Electroporation/history/*methods
*Gene Transfer Techniques/history
History, 20th Century
History, 21st Century
Molecular Biology/history/*methods

@article {pmid31630114,
year = {2020},
author = {Benson, DL},
title = {Of Molecules and Mechanisms.},
journal = {The Journal of neuroscience : the official journal of the Society for Neuroscience},
volume = {40},
number = {1},
pages = {81-88},
pmid = {31630114},
issn = {1529-2401},
support = {R01 MH103455/MH/NIMH NIH HHS/United States ; R01 MH104491/MH/NIMH NIH HHS/United States ; R01 NS107512/NS/NINDS NIH HHS/United States ; },
mesh = {Animals ; CRISPR-Cas Systems ; Exocytosis ; Gene Expression Regulation ; Gene Transfer Techniques/history ; Genes, Reporter ; History, 20th Century ; History, 21st Century ; Humans ; In Situ Hybridization/history/methods ; Microscopy/history/methods ; Molecular Biology/*history/methods ; Nerve Tissue Proteins/genetics/physiology ; Neurosciences/*history ; PDZ Domains ; Polymerase Chain Reaction/history ; Protein Engineering/history ; RNA/genetics ; Recombinant Proteins ; Sequence Analysis, DNA/history/methods ; },
abstract = {Without question, molecular biology drives modern neuroscience. The past 50 years has been nothing short of revolutionary as key findings have moved the field from correlation toward causation. Most obvious are the discoveries and strategies that have been used to build tools for visualizing circuits, measuring activity, and regulating behavior. Less flashy, but arguably as important are the myriad investigations uncovering the actions of single molecules, macromolecular structures, and integrated machines that serve as the basis for constructing cellular and signaling pathways identified in wide-scale gene or RNA studies and for feeding data into informational networks used in systems biology. This review follows the pathways that were opened in neuroscience by major discoveries and set the stage for the next 50 years.},
}

Animals
CRISPR-Cas Systems
Exocytosis
Gene Expression Regulation
Gene Transfer Techniques/history
Genes, Reporter
History, 20th Century
History, 21st Century
Humans
In Situ Hybridization/history/methods
Microscopy/history/methods
Molecular Biology/*history/methods
Nerve Tissue Proteins/genetics/physiology
Neurosciences/*history
PDZ Domains
Polymerase Chain Reaction/history
Protein Engineering/history
RNA/genetics
Recombinant Proteins
Sequence Analysis, DNA/history/methods

@article {pmid31294870,
year = {2020},
author = {DeMarini, DM},
title = {The mutagenesis moonshot: The propitious beginnings of the environmental mutagenesis and genomics society.},
journal = {Environmental and molecular mutagenesis},
volume = {61},
number = {1},
pages = {8-24},
pmid = {31294870},
issn = {1098-2280},
support = {EPA999999/ImEPA/Intramural EPA/United States ; N/A//Intramural research program of the Office of Research and Development, U.S. Environmental Protection Agency, Research Triangle Park, NC 27711/International ; },
mesh = {Animals ; Environmental Exposure/*adverse effects ; *Genomics/history/methods ; Germ Cells/drug effects/metabolism/radiation effects ; History, 20th Century ; History, 21st Century ; Humans ; *Mutagenesis/drug effects/radiation effects ; Mutagenicity Tests/history/methods ; Mutagens/*toxicity ; Societies, Scientific/history ; Ultraviolet Rays/adverse effects ; X-Rays/adverse effects ; },
abstract = {A mutagenesis moonshot addressing the influence of the environment on our genetic wellbeing was launched just 2 months before astronauts landed on the moon. Its impetus included the discovery that X-rays (Muller HJ. [1927]: Science 64:84-87) and chemicals (Auerbach and Robson. [1946]: Nature 157:302) were germ-cell mutagens, the introduction of a growing number of untested chemicals into the environment after World War II, and an increasing awareness of the role of environmental pollution on human health. Due to mounting concern from influential scientists that germ-cell mutagens might be ubiquitous in the environment, Alexander Hollaender and colleagues founded in 1969 the Environmental Mutagen Society (EMS), now the Environmental Mutagenesis and Genomics Society (EMGS); Frits Sobels founded the European EMS in 1970. As Fred de Serres noted, such societies were necessary because protecting populations from environmental mutagens could not be addressed by existing scientific societies, and new multidisciplinary alliances were required to spearhead this movement. The nascent EMS gathered policy makers and scientists from government, industry, and academia who became advocates for laws requiring genetic toxicity testing of pesticides and drugs and helped implement those laws. They created an electronic database of the mutagenesis literature; established a peer-reviewed journal; promoted basic and applied research in DNA repair and mutagenesis; and established training programs that expanded the science worldwide. Despite these successes, one objective remains unfulfilled: identification of human germ-cell mutagens. After 50 years, the voyage continues, and a vibrant EMGS is needed to bring the mission to its intended target of protecting populations from genetic hazards. Environ. Mol. Mutagen. 61:8-24, 2020. © 2019 Wiley Periodicals, Inc.},
}

Animals
Environmental Exposure/*adverse effects
*Genomics/history/methods
Germ Cells/drug effects/metabolism/radiation effects
History, 20th Century
History, 21st Century
Humans
*Mutagenesis/drug effects/radiation effects
Mutagenicity Tests/history/methods
Mutagens/*toxicity
Societies, Scientific/history
Ultraviolet Rays/adverse effects
X-Rays/adverse effects

@article {pmid31028774,
year = {2019},
author = {Thieffry, D and Kaufman, M},
title = {Prologue to the special issue of JTB dedicated to the memory of René Thomas (1928-2017): A journey through biological circuits, logical puzzles and complex dynamics.},
journal = {Journal of theoretical biology},
volume = {474},
number = {},
pages = {42-47},
doi = {10.1016/j.jtbi.2019.04.021},
pmid = {31028774},
issn = {1095-8541},
mesh = {History, 20th Century ; History, 21st Century ; Humans ; *Models, Biological ; Molecular Biology/*history ; Portraits as Topic ; },
}

History, 20th Century
History, 21st Century
Humans
*Models, Biological
Molecular Biology/*history
Portraits as Topic

@article {pmid32205426,
year = {2020},
author = {Davis, TH},
title = {QnAs with Jens Nielsen.},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {117},
number = {14},
pages = {7548-7549},
pmid = {32205426},
issn = {1091-6490},
mesh = {Cell Cycle ; Genomics/*history ; History, 20th Century ; History, 21st Century ; Saccharomyces cerevisiae/cytology/metabolism ; },
}

Cell Cycle
Genomics/*history
History, 20th Century
History, 21st Century
Saccharomyces cerevisiae/cytology/metabolism

@article {pmid31336383,
year = {2019},
author = {Shi, Y},
title = {Arnold J. Levine and my career development.},
journal = {Journal of molecular cell biology},
volume = {11},
number = {7},
pages = {546-550},
pmid = {31336383},
issn = {1759-4685},
mesh = {History, 20th Century ; History, 21st Century ; Humans ; Molecular Biology/education/*history ; },
}

History, 20th Century
History, 21st Century
Humans
Molecular Biology/education/*history

@article {pmid31310653,
year = {2019},
author = {Zambetti, GP},
title = {Arnie Levine and the MDM2-p53 discovery: a postdoctoral fellow's perspective.},
journal = {Journal of molecular cell biology},
volume = {11},
number = {7},
pages = {620-623},
pmid = {31310653},
issn = {1759-4685},
mesh = {History, 20th Century ; History, 21st Century ; Molecular Biology/education/*history ; *Proto-Oncogene Proteins c-mdm2/genetics/history/metabolism ; *Tumor Suppressor Protein p53/genetics/history/metabolism ; },
}

History, 20th Century
History, 21st Century
Molecular Biology/education/*history
*Proto-Oncogene Proteins c-mdm2/genetics/history/metabolism
*Tumor Suppressor Protein p53/genetics/history/metabolism

@article {pmid31283824,
year = {2019},
author = {Hinds, PW},
title = {A paean to Arnie Levine on the occasion of his 80th birthday.},
journal = {Journal of molecular cell biology},
volume = {11},
number = {7},
pages = {544-545},
pmid = {31283824},
issn = {1759-4685},
mesh = {*Anniversaries and Special Events ; History, 20th Century ; History, 21st Century ; Humans ; Molecular Biology/*history ; },
}

*Anniversaries and Special Events
History, 20th Century
History, 21st Century
Humans
Molecular Biology/*history

@article {pmid31704364,
year = {2020},
author = {Rawson, RV and Scolyer, RA},
title = {From Breslow to BRAF and immunotherapy: evolving concepts in melanoma pathogenesis and disease progression and their implications for changing management over the last 50 years.},
journal = {Human pathology},
volume = {95},
number = {},
pages = {149-160},
doi = {10.1016/j.humpath.2019.09.017},
pmid = {31704364},
issn = {1532-8392},
mesh = {Antineoplastic Agents, Immunological/history/*therapeutic use ; *Biomarkers, Tumor/antagonists & inhibitors/genetics/history ; *Dermatology/history/trends ; Diffusion of Innovation ; Disease Progression ; Genetic Predisposition to Disease ; History, 20th Century ; History, 21st Century ; Humans ; *Melanoma/drug therapy/genetics/history/pathology ; Molecular Targeted Therapy/history/trends ; *Mutation ; Pathology, Molecular/history/trends ; Phenotype ; *Proto-Oncogene Proteins B-raf/antagonists & inhibitors/genetics/history ; *Skin Neoplasms/drug therapy/genetics/history/pathology ; },
abstract = {Since it was first recognized as a disease entity more than two centuries ago, advanced melanoma has, until recently, followed a very aggressive and almost universally fatal clinical course. However, over the past 50 years crucial ground breaking research has greatly enhanced our understanding of the etiology, risk factors, genomic pathogenesis, immunological interactions, prognostic features and management of melanoma. It is this combined body of work which has culminated in the exciting improvements in patient outcomes for those with advanced melanoma over the last ten years. In this the 50th anniversary of Human Pathology, we highlight the key developments in melanoma over this period.},
}

Antineoplastic Agents, Immunological/history/*therapeutic use
*Biomarkers, Tumor/antagonists & inhibitors/genetics/history
*Dermatology/history/trends
Diffusion of Innovation
Disease Progression
Genetic Predisposition to Disease
History, 20th Century
History, 21st Century
Humans
*Melanoma/drug therapy/genetics/history/pathology
Molecular Targeted Therapy/history/trends
*Mutation
Pathology, Molecular/history/trends
Phenotype
*Proto-Oncogene Proteins B-raf/antagonists & inhibitors/genetics/history
*Skin Neoplasms/drug therapy/genetics/history/pathology

@article {pmid31682887,
year = {2020},
author = {Solanki, M and Visscher, D},
title = {Pathology of breast cancer in the last half century.},
journal = {Human pathology},
volume = {95},
number = {},
pages = {137-148},
doi = {10.1016/j.humpath.2019.09.007},
pmid = {31682887},
issn = {1532-8392},
mesh = {Biomarkers, Tumor/genetics/history ; Breast/*pathology ; Breast Neoplasms/genetics/history/*pathology ; Diffusion of Innovation ; Female ; Genetic Predisposition to Disease ; History, 20th Century ; History, 21st Century ; Humans ; *Pathology, Molecular/history/trends ; },
abstract = {The past 50 years has been an era of technological innovation converging with the now dominant culture of testing hypotheses using clinical trials and case cohort methodology with rigorous statistical analysis. Great advances have been made in early diagnosis and, especially, less toxic and disfiguring primary therapy. Many of the advances in pathology have been in conjunction with efforts to support clinical initiatives, improve diagnostic reliability and translate basic science discoveries into tests that stratify patient management. Pathologists, with the support of epidemiologists, have lead significant advancements in the description and clinical significance of benign breast disease. Despite considerable efforts, the cure for breast cancer awaits better understanding of the pathophysiology of metastasis. We stand now at the brink a new era of technology, in which powerful genomic assays may be put to use in uncovering targets of therapy and defining mechanisms of disease progression. Pathologists must be active in ensuring that discoveries in this realm are optimized by assuring association with appropriate histological correlation and valid clinical endpoints.},
}

Biomarkers, Tumor/genetics/history
Breast/*pathology
Breast Neoplasms/genetics/history/*pathology
Diffusion of Innovation
Female
Genetic Predisposition to Disease
History, 20th Century
History, 21st Century
Humans
*Pathology, Molecular/history/trends

@article {pmid31669060,
year = {2020},
author = {Folpe, AL},
title = {"Hey! Whatever happened to hemangiopericytoma and fibrosarcoma?" An update on selected conceptual advances in soft tissue pathology which have occurred over the past 50 years.},
journal = {Human pathology},
volume = {95},
number = {},
pages = {113-136},
doi = {10.1016/j.humpath.2019.10.001},
pmid = {31669060},
issn = {1532-8392},
mesh = {Biomarkers, Tumor/analysis/genetics/history ; Diffusion of Innovation ; Fibrosarcoma/chemistry/genetics/history/*pathology ; Genetic Predisposition to Disease ; Hemangiopericytoma/chemistry/genetics/history/*pathology ; History, 20th Century ; History, 21st Century ; Humans ; *Immunohistochemistry/history/trends ; *Pathology, Molecular/history/trends ; Phenotype ; Predictive Value of Tests ; Soft Tissue Neoplasms/chemistry/genetics/history/*pathology ; },
abstract = {Hemangiopericytoma and fibrosarcoma represented at one time two of the most common diagnoses in soft tissue pathology. Both terms are now largely extinct. This article will review the clinicopathologic, immunohistochemical and molecular genetic advances that have led to these changes, and review the pathologic features of a select group of soft tissue tumors previously classified as hemangiopericytoma or fibrosarcoma.},
}

Biomarkers, Tumor/analysis/genetics/history
Diffusion of Innovation
Fibrosarcoma/chemistry/genetics/history/*pathology
Genetic Predisposition to Disease
Hemangiopericytoma/chemistry/genetics/history/*pathology
History, 20th Century
History, 21st Century
Humans
*Immunohistochemistry/history/trends
*Pathology, Molecular/history/trends
Phenotype
Predictive Value of Tests
Soft Tissue Neoplasms/chemistry/genetics/history/*pathology

@article {pmid31655169,
year = {2020},
author = {MacLennan, GT and Cheng, L},
title = {Five decades of urologic pathology: the accelerating expansion of knowledge in renal cell neoplasia.},
journal = {Human pathology},
volume = {95},
number = {},
pages = {24-45},
doi = {10.1016/j.humpath.2019.09.009},
pmid = {31655169},
issn = {1532-8392},
mesh = {Biomarkers, Tumor/genetics/history ; Diffusion of Innovation ; Genetic Predisposition to Disease ; History, 20th Century ; History, 21st Century ; Humans ; Kidney Neoplasms/classification/genetics/history/*pathology ; *Pathology, Molecular/history/trends ; Phenotype ; *Urology/history/trends ; },
abstract = {Those who are knowledgeable in cosmology inform us that the expansion of the universe is such that the velocity at which a distant galaxy is receding from the observer is continually increasing with time. We humbly paraphrase that as "The bigger the universe gets, the faster it gets bigger." This is an interesting analogy for the expansion of knowledge in the field of renal tumor pathology over the past 30 to 50 years. It is clear that a multitude of dedicated investigators have devoted incalculable amounts of time and effort to the pursuit of knowledge about renal epithelial neoplasms. As a consequence of the contributions of numerous investigators over many decades, the most recent World Health Organization classification of renal neoplasms includes about 50 well defined and distinctive renal tumors, as well as various miscellaneous and metastatic tumors. In addition, a number of emerging or provisional new entities are under active investigation and may be included in future classifications. In this review, we will focus on a number of these tumors, tracing as accurately as we can the origins of their discovery, relating relevant additions to the overall knowledge base surrounding them, and in some instances addressing changes in nomenclature.},
}

Biomarkers, Tumor/genetics/history
Diffusion of Innovation
Genetic Predisposition to Disease
History, 20th Century
History, 21st Century
Humans
Kidney Neoplasms/classification/genetics/history/*pathology
*Pathology, Molecular/history/trends
Phenotype
*Urology/history/trends

@article {pmid31654692,
year = {2020},
author = {Baloch, Z and LiVolsi, VA},
title = {Fifty years of thyroid pathology: concepts and developments.},
journal = {Human pathology},
volume = {95},
number = {},
pages = {46-54},
doi = {10.1016/j.humpath.2019.09.008},
pmid = {31654692},
issn = {1532-8392},
mesh = {Biomarkers, Tumor/genetics/history ; Diffusion of Innovation ; Genetic Predisposition to Disease ; History, 20th Century ; History, 21st Century ; Humans ; *Pathology/history/trends ; *Pathology, Molecular/history/trends ; Thyroid Diseases/genetics/history/*pathology ; Thyroid Gland/*pathology ; },
abstract = {The past half century has seen a number of advances in pathology of thyroid diseases, especially neoplastic lesions. These include the description of new entities, the definition of prognostically important lesions, the incorporation of fine needle aspiration biopsy and its functional risk stratification of diagnoses into the clinical evaluation and therapeutic recommendations of the patient with thyroid nodules and the understanding of thyroid neoplastic development, diagnostic and prognostic parameters by use of molecular analysis so that such techniques are becoming standard of care for patients with thyroid tumors. The histopathologist and cytopathologist have been and continue to be at the forefront in the definition and understanding of these areas of thyroid disease. This review describes many of the most important advances in this area in an attempt bring the practicing pathologist up to date in these developments.},
}

Biomarkers, Tumor/genetics/history
Diffusion of Innovation
Genetic Predisposition to Disease
History, 20th Century
History, 21st Century
Humans
*Pathology/history/trends
*Pathology, Molecular/history/trends
Thyroid Diseases/genetics/history/*pathology
Thyroid Gland/*pathology

@article {pmid31521627,
year = {2020},
author = {Hruban, RH and Klimstra, DS and Zamboni, G and Klöppel, G},
title = {A semicentennial of pancreatic pathology: the genetic revolution is here, but don't throw the baby out with the bath water!.},
journal = {Human pathology},
volume = {95},
number = {},
pages = {99-112},
doi = {10.1016/j.humpath.2019.08.024},
pmid = {31521627},
issn = {1532-8392},
mesh = {Diffusion of Innovation ; Genetic Predisposition to Disease ; History, 20th Century ; History, 21st Century ; Humans ; Pancreas/*pathology ; Pancreatic Diseases/genetics/history/*pathology ; *Pathology, Molecular/history/trends ; Phenotype ; Predictive Value of Tests ; },
abstract = {The last 50 years have witnessed an explosion in our understanding of the pathology of pancreatic diseases. Entities known to exist 50 years ago have been defined more precisely and are now better classified. New entities, previously not recognized, have been discovered and can now be treated. Importantly, new tools have been developed that have unraveled the fundamental biological drivers of a number of pancreatic diseases. Many of these same tools have also been applied clinically, supplementing the tried and true hematoxylin and eosin stained slide with a plethora of new, highly sensitive and specific tests that improve diagnostic accuracy and delineate best treatments. As exciting as these many advances are, our knowledge of pancreatic pathology remains incomplete, and there is much to be learned.},
}

Diffusion of Innovation
Genetic Predisposition to Disease
History, 20th Century
History, 21st Century
Humans
Pancreas/*pathology
Pancreatic Diseases/genetics/history/*pathology
*Pathology, Molecular/history/trends
Phenotype
Predictive Value of Tests

@article {pmid31302204,
year = {2020},
author = {Louis, DN},
title = {A half century of change in diagnostic neuropathology: from the giants of yore to current brain tumor classification.},
journal = {Human pathology},
volume = {95},
number = {},
pages = {161-168},
doi = {10.1016/j.humpath.2019.06.006},
pmid = {31302204},
issn = {1532-8392},
mesh = {Biomarkers, Tumor/genetics/history ; Brain Neoplasms/classification/genetics/history/*pathology ; Diffusion of Innovation ; History, 20th Century ; History, 21st Century ; Humans ; *Neuropathology/history/trends ; Pathology, Molecular/history/trends ; *Terminology as Topic ; },
abstract = {The first issue of Human Pathology contains a laudatory review of one of the most treasured books in the history of neuropathology: Neurological Clinicopathological Conferences of the Massachusetts General Hospital, a collection of neurological cases that appeared first in the New England Journal of Medicine in the 1940s, 1950s, and 1960s. Each patient history is discussed by well-known neurologists, neurosurgeons, and neuropathologists. Review of these cases provides a framework to explore diagnostic shifts that have occurred over the past half century. Importantly, while the discussants of these cases were great diagnosticians, they were somewhat limited by the methods available to them at the time; subsequent novel technologies provided opportunities for new insights that were made by the next generation of experts. Today's pathologists (whether neuropathologists or any other pathology subspecialists) are similarly skilled at diagnosis, although their diagnoses are now more often made on biopsies (rather than autopsies) and informed by pre-operative imaging studies as well as post-operative molecular analyses. In turn, one would conclude that, even in the face of future technological changes brought about by disruptive innovations like artificial intelligence and deep molecular analyses, a need will continue for the expertise of pathologists and other clinical diagnosticians.},
}

Biomarkers, Tumor/genetics/history
Brain Neoplasms/classification/genetics/history/*pathology
Diffusion of Innovation
History, 20th Century
History, 21st Century
Humans
*Neuropathology/history/trends
Pathology, Molecular/history/trends
*Terminology as Topic

@article {pmid30968456,
year = {2019},
author = {Mason, CA and Sherman, SM},
title = {Editorial: Introduction to the special issue in honor of Ray Guillery.},
journal = {The European journal of neuroscience},
volume = {49},
number = {7},
pages = {884-887},
doi = {10.1111/ejn.14419},
pmid = {30968456},
issn = {1460-9568},
mesh = {Genetics/*history ; History, 20th Century ; History, 21st Century ; Neurosciences/*history ; },
}

Genetics/*history
History, 20th Century
History, 21st Century
Neurosciences/*history

@article {pmid30801828,
year = {2019},
author = {Mason, C and Guillery, R},
title = {Conversations with Ray Guillery on albinism: linking Siamese cat visual pathway connectivity to mouse retinal development.},
journal = {The European journal of neuroscience},
volume = {49},
number = {7},
pages = {913-927},
pmid = {30801828},
issn = {1460-9568},
support = {//Vision of Children Foundation/International ; R01 EY012736/EY/NEI NIH HHS/United States ; R01 EY015290/EY/NEI NIH HHS/United States ; R21 EY023714/EY/NEI NIH HHS/United States ; T32 EY013933/EY/NEI NIH HHS/United States ; },
mesh = {Albinism, Ocular/*genetics ; Animals ; Cats ; Genetics/*history ; History, 20th Century ; History, 21st Century ; Mice ; Monophenol Monooxygenase/genetics ; Neurosciences/*history ; Retina/*growth & development/metabolism/physiology ; Visual Pathways/*physiology ; },
abstract = {In albinism of all species, perturbed melanin biosynthesis in the eye leads to foveal hypoplasia, retinal ganglion cell misrouting, and, consequently, altered binocular vision. Here, written before he died, Ray Guillery chronicles his discovery of the aberrant circuitry from eye to brain in the Siamese cat. Ray's characterization of visual pathway anomalies in this temperature sensitive mutation of tyrosinase and thus melanin synthesis in domestic cats opened the exploration of albinism and simultaneously, a genetic approach to the organization of neural circuitry. I follow this account with a remembrance of Ray's influence on my work. Beginning with my postdoc research with Ray on the cat visual pathway, through my own work on the mechanisms of retinal axon guidance in the developing mouse, Ray and I had a continuous and rich dialogue about the albino visual pathway. I will present the questions Ray posed and clues we have to date on the still-elusive link between eye pigment and the proper balance of ipsilateral and contralateral retinal ganglion cell projections to the brain.},
}

Albinism, Ocular/*genetics
Animals
Cats
Genetics/*history
History, 20th Century
History, 21st Century
Mice
Monophenol Monooxygenase/genetics
Neurosciences/*history
Retina/*growth & development/metabolism/physiology
Visual Pathways/*physiology

@article {pmid30152010,
year = {2019},
author = {Walsh, CA},
title = {Rainer W. Guillery and the genetic analysis of brain development.},
journal = {The European journal of neuroscience},
volume = {49},
number = {7},
pages = {900-908},
pmid = {30152010},
issn = {1460-9568},
support = {R01 NS032457/NS/NINDS NIH HHS/United States ; R01 MH083565/MH/NIMH NIH HHS/United States ; U01 MH106883/MH/NIMH NIH HHS/United States ; U01MH106883/MH/NIMH NIH HHS/United States ; //Paul G. Allen Family Foundation/International ; /HHMI/Howard Hughes Medical Institute/United States ; /HHMI/Howard Hughes Medical Institute/United States ; R37 NS035129/NS/NINDS NIH HHS/United States ; R01 NS035129/NS/NINDS NIH HHS/United States ; R01NS032457/NS/NINDS NIH HHS/United States ; },
mesh = {Animals ; Brain/growth & development/metabolism/*physiology ; Genetics/*history ; History, 20th Century ; History, 21st Century ; Humans ; Neurogenesis/genetics ; Neurosciences/*history ; },
abstract = {Ray Guillery had broad research interests that spanned cellular neuroanatomy, but was perhaps best known for his investigation of the connectivity and function of the thalamus, especially the visual pathways. His work on the genetics of abnormal vision in albino mammals served as an early paradigm for genetic approaches for studying brain connectivity of complex species in general, and remains of major relevance today. This work, especially on the Siamese cat, illustrates the complex relationship between genotype and physiology of cerebral cortical circuits, and anticipated many of the issues underlying the imperfect relationship between genes, circuits, and behavior in mammalian species including human. This review also briefly summarizes studies from our own lab inspired by Ray Guillery's legacy that continues to explore the relationship between genes, structure, and behavior in human cerebral cortex.},
}

Animals
Brain/growth & development/metabolism/*physiology
Genetics/*history
History, 20th Century
History, 21st Century
Humans
Neurogenesis/genetics
Neurosciences/*history

@article {pmid29883004,
year = {2019},
author = {LaMantia, AS},
title = {The strengths of the genetic approach to understanding neural systems development and function: Ray Guillery's synthesis.},
journal = {The European journal of neuroscience},
volume = {49},
number = {7},
pages = {888-899},
pmid = {29883004},
issn = {1460-9568},
support = {U54 HD090257/HD/NICHD NIH HHS/United States ; //National Down Syndrome Society/International ; //March of Dimes/International ; //National Institute for Child Health and Human Development/International ; //Brain and Behavior Foundation (NARSAD)/International ; //Simons Foundation/International ; R01 HD042182/HD/NICHD NIH HHS/United States ; //National Institute for Mental Health/International ; //Alfred P. Sloan Foundation/International ; P01 HD083157/HD/NICHD NIH HHS/United States ; //National Institute for Deafness and Communication Disorders/International ; },
mesh = {Animals ; Brain/growth & development/metabolism/*physiology ; Genetics, Behavioral/*history ; History, 20th Century ; History, 21st Century ; Humans ; *Neurogenesis ; Neurosciences/*history ; },
abstract = {The organization and function of sensory systems, especially the mammalian visual system, has been the focus of philosophers and scientists for centuries-from Descartes and Newton onward. Nevertheless, the utility of understanding development and its genetic foundations for deeper insight into neural function has been debated: Do you need to know how something is assembled-a car, for example-to understand how it works or how to use it-to turn on the ignition and drive? This review addresses this issue for sensory pathways. The pioneering work of the late Rainer W. (Ray) Guillery provides an unequivocal answer to this central question: Using genetics for mechanistic exploration of sensory system development yields essential knowledge of organization and function. Ray truly built the foundation for this now accepted tenet of modern neuroscience. His work on the development and reorganization of visual pathways in albino mammals-all with primary genetic mutations in genes for pigmentation-defined the genetic approach to neural systems development, function and plasticity. The work that followed his lead in a variety of sensory systems, including my own work in the developing olfactory system, proceeds directly from Ray's fundamental contributions.},
}

Animals
Brain/growth & development/metabolism/*physiology
Genetics, Behavioral/*history
History, 20th Century
History, 21st Century
Humans
*Neurogenesis
Neurosciences/*history

@article {pmid30170112,
year = {2019},
author = {Jorrin-Novo, JV and Komatsu, S and Sanchez-Lucas, R and Rodríguez de Francisco, LE},
title = {Gel electrophoresis-based plant proteomics: Past, present, and future. Happy 10th anniversary Journal of Proteomics!.},
journal = {Journal of proteomics},
volume = {198},
number = {},
pages = {1-10},
doi = {10.1016/j.jprot.2018.08.016},
pmid = {30170112},
issn = {1876-7737},
mesh = {Anniversaries and Special Events ; *Electrophoresis, Gel, Two-Dimensional/history/trends ; History, 21st Century ; Periodicals as Topic ; Plant Proteins/*metabolism ; Plants/*metabolism ; *Proteomics/history/trends ; },
abstract = {In this century we have assisted at an unimaginable expansion of proteomics, with continuous innovations and optimizations in methods, techniques, protocols, equipment, and associated bioinformatics tools. We have moved forward very fast from first (gel electrophoresis based), to second (based on isotopic or isobaric labelling), to third (shotgun or gel-free, label-free), and to fourth (targeted, mass-western, or SRM/MRM) generation techniques. This evolution is clearly observed in the literature since 1994, when the term "proteome" was first coined, with plant proteomics progressing at a much lower speed than human and other model organisms. The question behind this review is: Is gel electrophoresis an obsolete technique? Is it still alive? The answer is that gel electrophoresis is still a valid technique, with its own particularities, strengths, and weaknesses, "irreplaceable" in top-down experiments directed at investigating protein species, loci and allelic variants, and isoforms, as well as in the post-translational modifications and interactions studies; it is an excellent complementary and alternative approach that could lead us to achieve a deeper visualization and knowledge of the cell proteome. The past, present, and future of this technique is being reviewed. It is not pretended to discuss in detail technical aspects, referring to key original papers or previous reviews, but instead, how it has contributed, from a historical perspective, to plant proteomics and biology research. It is our personal congratulations to "Journal of Proteomics" that celebrates this year its 10th anniversary, and, at the same time, a tribute to those scientists who have contributed to the establishment and development of the gel electrophoresis technique and its application to proteomics and plant biology research. Their direct or indirect teaching has been very valuable to those of us who once decided to enter proteomics, with no access to any sophisticated and expensive equipment. This gel electrophoresis-based plant proteomics review is divided into the following sections: introduction, history, methodology, contribution to plant biology research, and future directions.},
}

Anniversaries and Special Events
*Electrophoresis, Gel, Two-Dimensional/history/trends
History, 21st Century
Periodicals as Topic
Plant Proteins/*metabolism
Plants/*metabolism
*Proteomics/history/trends

@article {pmid31628163,
year = {2019},
author = {Salomé, PA},
title = {Sabeeha Merchant.},
journal = {The Plant cell},
volume = {31},
number = {12},
pages = {2814-2816},
pmid = {31628163},
issn = {1532-298X},
mesh = {Chlamydomonas reinhardtii/genetics/*metabolism ; Cyanobacteria/chemistry/metabolism ; Electron Transport Chain Complex Proteins/chemistry/*metabolism ; Genomics ; History, 20th Century ; History, 21st Century ; Homeostasis/physiology ; Humans ; Metals/chemistry/*metabolism ; Molecular Biology/history ; },
}

Chlamydomonas reinhardtii/genetics/*metabolism
Cyanobacteria/chemistry/metabolism
Electron Transport Chain Complex Proteins/chemistry/*metabolism
Genomics
History, 20th Century
History, 21st Century
Homeostasis/physiology
Humans
Metals/chemistry/*metabolism
Molecular Biology/history

@article {pmid31350311,
year = {2019},
author = {},
title = {The people behind the papers - Shai Eyal and Elazar Zelzer.},
journal = {Development (Cambridge, England)},
volume = {146},
number = {14},
pages = {},
doi = {10.1242/dev.182733},
pmid = {31350311},
issn = {1477-9129},
mesh = {Animals ; Bone Development/genetics ; Bone Regeneration/genetics ; *Developmental Biology/history ; Embryo, Mammalian ; History, 20th Century ; History, 21st Century ; Israel ; *Laboratory Personnel/history ; Mice ; *Molecular Biology/history ; Spinal Cord/embryology/growth & development ; },
abstract = {Most bones in the vertebrate skeleton are made in the same way - endochondrial ossification - yet they display a variety of shapes and sizes. The question of how these unique bone morphologies, including the superstructures that protrude from their surfaces, arise during development is still unclear, and the subject of a new paper in Development We caught up with first author Shai Eyal and his supervisor Elazar Zelzer, Professor in the Department of Molecular Genetics at the Weizmann Institute of Science in Rehovot, Israel, to find out more about the story.},
}

Animals
Bone Development/genetics
Bone Regeneration/genetics
*Developmental Biology/history
Embryo, Mammalian
History, 20th Century
History, 21st Century
Israel
*Laboratory Personnel/history
Mice
*Molecular Biology/history
Spinal Cord/embryology/growth & development

@article {pmid29712681,
year = {2019},
author = {Rubin, MA and Demichelis, F},
title = {The Genomics of Prostate Cancer: A Historic Perspective.},
journal = {Cold Spring Harbor perspectives in medicine},
volume = {9},
number = {3},
pages = {},
doi = {10.1101/cshperspect.a034942},
pmid = {29712681},
issn = {2157-1422},
mesh = {Computational Biology ; DNA Copy Number Variations/genetics ; Drug Resistance, Neoplasm/genetics ; Gene Fusion/genetics ; Gene Rearrangement/genetics ; Genomics/*history ; High-Throughput Nucleotide Sequencing ; History, 20th Century ; History, 21st Century ; Humans ; Male ; Microsatellite Repeats/genetics ; Neoplasm Proteins/genetics ; Polymorphism, Restriction Fragment Length/genetics ; Prostatic Neoplasms/*genetics/history ; },
abstract = {The genomics of prostate cancer (PCA) has been difficult to study compared with some other cancer types for a multitude of reasons, despite significant efforts since the early 1980s. Overcoming some of these obstacles has paved the way for greater insight into the genomics of PCA. The advent of high-throughput technologies coming from the initial use of microsatellite and oligonucleotide probes gave rise to techniques like comparative genomic hybridization (CGH). With the introduction of massively parallel genomic sequencing, referred to as next-generation sequencing (NGS), a deeper understanding of cancer genomics in general has occurred. Along with these technologic advances, there has been the development of computational biology and statistical approaches to address novel large data sets characterized by single base resolution. This review will provide a historic perspective of PCA genomics with an emphasis on the cardinal mutations and alterations observed to be consistently seen in PCA for both hormone-naïve localized PCA and castration-resistant prostate cancer (CRPC). There will be a focus on alterations that have the greatest potential to play a role in disease progression and therapy management.},
}

Computational Biology
DNA Copy Number Variations/genetics
Drug Resistance, Neoplasm/genetics
Gene Fusion/genetics
Gene Rearrangement/genetics
Genomics/*history
High-Throughput Nucleotide Sequencing
History, 20th Century
History, 21st Century
Humans
Male
Microsatellite Repeats/genetics
Neoplasm Proteins/genetics
Polymorphism, Restriction Fragment Length/genetics
Prostatic Neoplasms/*genetics/history

@article {pmid30786226,
year = {2019},
author = {Nicol, D and Dreyfuss, RC and Gold, ER and Li, W and Liddicoat, J and Van Overwalle, G},
title = {International Divergence in Gene Patenting.},
journal = {Annual review of genomics and human genetics},
volume = {20},
number = {},
pages = {519-541},
doi = {10.1146/annurev-genom-083118-015112},
pmid = {30786226},
issn = {1545-293X},
mesh = {*Genes ; Genetics/history/*legislation & jurisprudence ; Genomics/history/*legislation & jurisprudence ; History, 20th Century ; History, 21st Century ; Humans ; *Patents as Topic ; },
abstract = {This review explores the recent divergence in international patent law relating to genes and associated subject matter. This divergence stems primarily from decisions of the highest courts in the United States and Australia on the eligibility of patent claims relating to the BRCA gene sequences. Patent offices, courts, and policy makers have struggled for many years to clearly articulate the bounds of patent claims on isolated and synthetic DNA and related products and processes, including methods for their use in genetic diagnostics. This review provides context to the current divergence by mapping key events in the gene patent journey from the early 1980s onward in five key jurisdictions: the United States, the member states of the European Patent Convention, Australia, Canada, and China. Early approaches to gene patenting had some commonalities across jurisdictions, which makes exploration of the recent divergence all the more interesting.There is insufficient empirical evidence to date to confidently predict the consequences of this recent divergence. However, it could potentially have a significant effect on local industry and on consumer access.},
}

*Genes
Genetics/history/*legislation & jurisprudence
Genomics/history/*legislation & jurisprudence
History, 20th Century
History, 21st Century
Humans
*Patents as Topic

@article {pmid31142179,
year = {2019},
author = {Tanimoto, H and Wu, CF},
title = {Comparative behavioral genetics: the Yamamoto approach.},
journal = {Journal of neurogenetics},
volume = {33},
number = {2},
pages = {41-43},
doi = {10.1080/01677063.2019.1616720},
pmid = {31142179},
issn = {1563-5260},
mesh = {Genetics, Behavioral/*history ; History, 20th Century ; History, 21st Century ; Japan ; },
}

Genetics, Behavioral/*history
History, 20th Century
History, 21st Century
Japan

@article {pmid31495822,
year = {2019},
author = {Hyun, J},
title = {Doctors Discussing "the Root of Koreans": Medical Genetics and the Korean Origin, 1975-1987.},
journal = {Ui sahak},
volume = {28},
number = {2},
pages = {551-590},
doi = {10.13081/kjmh.2019.28.551},
pmid = {31495822},
issn = {2093-5609},
mesh = {Anthropology/*history ; Genetics, Medical/*history ; History, 20th Century ; *Human Migration ; Humans ; International Cooperation/*history ; Republic of Korea ; },
abstract = {Anthropological genetics emerged as a new discipline to investigate the origin of human species in the second half of the twentieth century. Using the genetic database of blood groups and other protein polymorphisms, anthropological geneticists started redrawing the ancient migratory history of human populations. A peculiarity of the Korean experience is that clinical physicians were the first experts using genetic data to theorize the historical origin of the respective population. This paper examines how South Korean physicians produced the genetic knowledge and discourse of the Korean origin in the 1970s and 1980s. It argues that transnational scientific exchange led clinical researchers to engage in global anthropological studies. The paper focuses on two scientific cooperative cases in medical genetics at the time: the West German-South Korean pharmacogenetic research on the Korean population and the Asia-Oceania Histocompatibility Workshop. At the outset, physicians introduced medical genetics into their laboratory for clinical applications. Involved in cooperative projects on investigating anthropological implications of their clinical work, medical researchers came to use their genetic data for studying the Korean origin. In the process, physicians simply followed a nationalist narrative of the Korean origin rather than criticizing it. This was partially due to their lack of serious interest in anthropological work. Their explanations about the Korean origin would be considered "scientific" while hiding their embracing of the nationalist narrative.},
}

Anthropology/*history
Genetics, Medical/*history
History, 20th Century
*Human Migration
Humans
International Cooperation/*history
Republic of Korea

@article {pmid31266846,
year = {2019},
author = {Frank, M and Harkess, A and Washburn, J},
title = {James A. Birchler.},
journal = {The Plant cell},
volume = {31},
number = {10},
pages = {2277-2280},
pmid = {31266846},
issn = {1532-298X},
mesh = {Chromosomes/*genetics ; Chromosomes, Artificial ; Gene Dosage ; Genetics/*history ; Genomics ; History, 20th Century ; History, 21st Century ; Teaching/psychology ; Universities ; Zea mays/*genetics ; },
}

Chromosomes/*genetics
Chromosomes, Artificial
Gene Dosage
Genetics/*history
Genomics
History, 20th Century
History, 21st Century
Teaching/psychology
Universities
Zea mays/*genetics

@article {pmid31192450,
year = {2019},
author = {Drineas, P and Tsetsos, F and Plantinga, A and Lazaridis, I and Yannaki, E and Razou, A and Kanaki, K and Michalodimitrakis, M and Perez-Jimenez, F and De Silvestro, G and Renda, MC and Stamatoyannopoulos, JA and Kidd, KK and Browning, BL and Paschou, P and Stamatoyannopoulos, G},
title = {Genetic history of the population of Crete.},
journal = {Annals of human genetics},
volume = {83},
number = {6},
pages = {373-388},
pmid = {31192450},
issn = {1469-1809},
support = {4386//NSRF 2007-2013 ARISTEIA II Programme/International ; //Lucille P. Markey Charitable Trust/International ; P01 GM099568/GM/NIGMS NIH HHS/United States ; //Sangamo Biosciences/International ; IIS-1319280//Division of Information and Intelligent Systems/International ; R01 HG008359/HG/NHGRI NIH HHS/United States ; IIS-1661760//Division of Information and Intelligent Systems/International ; DGE-1256082//Division of Graduate Education/International ; },
mesh = {Crosses, Genetic ; Databases, Genetic ; Ethnic Groups/genetics ; European Continental Ancestry Group/*genetics/history ; Genetic Variation ; *Genetics, Population/history ; Genome, Human ; Genomics/methods ; Genotype ; Geography ; Greece ; History, Medieval ; Human Migration ; Humans ; },
abstract = {The medieval history of several populations often suffers from scarcity of contemporary records resulting in contradictory and sometimes biased interpretations by historians. This is the situation with the population of the island of Crete, which remained relatively undisturbed until the Middle Ages when multiple wars, invasions, and occupations by foreigners took place. Historians have considered the effects of the occupation of Crete by the Arabs (in the 9th and 10th centuries C.E.) and the Venetians (in the 13th to the 17th centuries C.E.) to the local population. To obtain insights on such effects from a genetic perspective, we studied representative samples from 17 Cretan districts using the Illumina 1 million or 2.5 million arrays and compared the Cretans to the populations of origin of the medieval conquerors and settlers. Highlights of our findings include (1) small genetic contributions from the Arab occupation to the extant Cretan population, (2) low genetic contribution of the Venetians to the extant Cretan population, and (3) evidence of a genetic relationship among the Cretans and Central, Northern, and Eastern Europeans, which could be explained by the settlement in the island of northern origin tribes during the medieval period. Our results show how the interaction between genetics and the historical record can help shed light on the historical record.},
}

Crosses, Genetic
Databases, Genetic
Ethnic Groups/genetics
European Continental Ancestry Group/*genetics/history
Genetic Variation
*Genetics, Population/history
Genome, Human
Genomics/methods
Genotype
Geography
Greece
History, Medieval
Human Migration
Humans

@article {pmid31140673,
year = {2019},
author = {Muenke, M},
title = {Onward and upward.},
journal = {American journal of medical genetics. Part A},
volume = {179},
number = {7},
pages = {1119-1121},
doi = {10.1002/ajmg.a.61207},
pmid = {31140673},
issn = {1552-4833},
mesh = {*Editorial Policies ; Genetic Diseases, Inborn/*diagnosis/pathology/therapy ; Genetics, Medical/history/methods/*trends ; History, 20th Century ; History, 21st Century ; Humans ; Periodicals as Topic ; },
}

*Editorial Policies
Genetic Diseases, Inborn/*diagnosis/pathology/therapy
Genetics, Medical/history/methods/*trends
History, 20th Century
History, 21st Century
Humans
Periodicals as Topic

@article {pmid30801633,
year = {2019},
author = {Kumar, TR},
title = {An interview with Dr Blanche Capel.},
journal = {Biology of reproduction},
volume = {100},
number = {4},
pages = {865-868},
doi = {10.1093/biolre/ioz033},
pmid = {30801633},
issn = {1529-7268},
mesh = {Animals ; *Cell Biology/history ; Embryonic Development/genetics ; Faculty, Medical/history ; *Genetics/history ; Gonads/*embryology/physiology ; History, 20th Century ; History, 21st Century ; *Sex Determination Processes ; United States ; },
}

Animals
*Cell Biology/history
Embryonic Development/genetics
Faculty, Medical/history
*Genetics/history
Gonads/*embryology/physiology
History, 20th Century
History, 21st Century
*Sex Determination Processes
United States

@article {pmid31432403,
year = {2019},
author = {Fernández-Irigoyen, J and Corrales, F and Santamaría, E},
title = {The Human Brain Proteome Project: Biological and Technological Challenges.},
journal = {Methods in molecular biology (Clifton, N.J.)},
volume = {2044},
number = {},
pages = {3-23},
doi = {10.1007/978-1-4939-9706-0_1},
pmid = {31432403},
issn = {1940-6029},
mesh = {Animals ; Biomarkers/blood/cerebrospinal fluid/metabolism ; Brain/*metabolism ; Cerebrospinal Fluid Proteins/*metabolism ; Computational Biology ; Diagnostic Imaging ; Flow Cytometry ; History, 21st Century ; Humans ; Laser Capture Microdissection ; Mass Spectrometry ; Mice ; Neurodegenerative Diseases/*cerebrospinal fluid/diagnosis/metabolism ; Proteome/*metabolism ; Proteomics/history/*methods ; },
abstract = {Brain proteomics has become a method of choice that allows zooming-in where neuropathophysiological alterations are taking place, detecting protein mediators that might eventually be measured in cerebrospinal fluid (CSF) as potential neuropathologically derived biomarkers. Following this hypothesis, mass spectrometry-based neuroproteomics has emerged as a powerful approach to profile neural proteomes derived from brain structures and CSF in order to map the extensive protein catalog of the human brain. This chapter provides a historical perspective on the Human Brain Proteome Project (HBPP), some recommendation to the experimental design in neuroproteomic projects, and a brief description of relevant technological and computational innovations that are emerging in the neurobiology field thanks to the proteomics community. Importantly, this chapter highlights recent discoveries from the biology- and disease-oriented branch of the HBPP (B/D-HBPP) focused on spatiotemporal proteomic characterizations of mouse models of neurodegenerative diseases, elucidation of proteostatic networks in different types of dementia, the characterization of unresolved clinical phenotypes, and the discovery of novel biomarker candidates in CSF.},
}

Animals
Biomarkers/blood/cerebrospinal fluid/metabolism
Brain/*metabolism
Cerebrospinal Fluid Proteins/*metabolism
Computational Biology
Diagnostic Imaging
Flow Cytometry
History, 21st Century
Humans
Laser Capture Microdissection
Mass Spectrometry
Mice
Neurodegenerative Diseases/*cerebrospinal fluid/diagnosis/metabolism
Proteome/*metabolism
Proteomics/history/*methods

@article {pmid31189910,
year = {2019},
author = {Woollard, A},
title = {100 years of genetics.},
journal = {Heredity},
volume = {123},
number = {1},
pages = {1-3},
doi = {10.1038/s41437-019-0230-2},
pmid = {31189910},
issn = {1365-2540},
mesh = {Animals ; Brassicaceae/genetics ; Drosophila/genetics ; Genetic Linkage ; Genetics/*history ; History, 20th Century ; Humans ; Intelligence/genetics ; Societies, Scientific/*history ; Streptomyces/genetics ; },
}

Animals
Brassicaceae/genetics
Drosophila/genetics
Genetic Linkage
Genetics/*history
History, 20th Century
Humans
Intelligence/genetics
Societies, Scientific/*history
Streptomyces/genetics

@article {pmid31189904,
year = {2019},
author = {van Heyningen, V},
title = {Genome sequencing-the dawn of a game-changing era.},
journal = {Heredity},
volume = {123},
number = {1},
pages = {58-66},
pmid = {31189904},
issn = {1365-2540},
mesh = {Animals ; Blotting, Southern ; Caenorhabditis elegans/genetics ; Chromosome Mapping/methods ; Computational Biology/*methods ; Genetic Predisposition to Disease ; Genome ; Genomics/history/*methods ; History, 20th Century ; *Human Genome Project ; Humans ; Sequence Analysis, DNA/methods ; },
abstract = {The development of genome sequencing technologies has revolutionized the biological sciences in ways which could not have been imagined at the time. This article sets out to document the dawning of the age of genomics and to consider the impact of this revolution on biological investigation, our understanding of life, and the relationship between science and society.},
}

Animals
Blotting, Southern
Caenorhabditis elegans/genetics
Chromosome Mapping/methods
Computational Biology/*methods
Genetic Predisposition to Disease
Genome
Genomics/history/*methods
History, 20th Century
*Human Genome Project
Humans
Sequence Analysis, DNA/methods

@article {pmid31189901,
year = {2019},
author = {Hurst, LD},
title = {A century of bias in genetics and evolution.},
journal = {Heredity},
volume = {123},
number = {1},
pages = {33-43},
pmid = {31189901},
issn = {1365-2540},
support = {ERC-2014-ADG 669207//EC | EC Seventh Framework Programm | FP7 Ideas: European Research Council (FP7-IDEAS-ERC - Specific Programme: "Ideas" Implementing the Seventh Framework Programme of the European Community for Research, Technological Development and Demonstration Activities (2007 to 2013))/International ; },
mesh = {Alleles ; Animals ; *Biological Evolution ; Eukaryotic Cells ; Gene Conversion ; Genetic Fitness ; Genetics/*history ; Heredity/*genetics ; History, 20th Century ; Mammals/genetics ; Models, Genetic ; *Selection, Genetic ; },
abstract = {Mendel proposed that the heritable material is particulate and that transmission of alleles is unbiased. An assumption of unbiased transmission was necessary to show how variation can be preserved in the absence of selection, so overturning an early objection to Darwinism. In the second half of the twentieth century, it was widely recognised that even strongly deleterious alleles can invade if they have strongly biased transmission (i.e. strong segregation distortion). The spread of alleles with distorted segregation can explain many curiosities. More recently, the selectionist-neutralist duopoly was broken by the realisation that biased gene conversion can explain phenomena such as mammalian isochore structures. An initial focus on unbiased transmission in 1919, has thus given way to an interest in biased transmission in 2019. A focus on very weak bias is now possible owing to technological advances, although technical biases may put a limit on resolving power. To understand the relevance of weak bias we could profit from having the concept of the effectively Mendelian allele, a companion to the effectively neutral allele. Understanding the implications of unbiased and biased transmission may, I suggest, be a good way to teach evolution so as to avoid psychological biases.},
}

Alleles
Animals
*Biological Evolution
Eukaryotic Cells
Gene Conversion
Genetic Fitness
Genetics/*history
Heredity/*genetics
History, 20th Century
Mammals/genetics
Models, Genetic
*Selection, Genetic

@article {pmid31854131,
year = {2019},
author = {},
title = {13th East-West Immunogenetics Conference, 14-16 March 2019, Zagreb, Croatia.},
journal = {HLA},
volume = {94 Suppl 2},
number = {},
pages = {3-76},
doi = {10.1111/tan.13766},
pmid = {31854131},
issn = {2059-2310},
mesh = {*Congresses as Topic/organization & administration/standards ; Croatia ; Europe ; History, 21st Century ; Humans ; Immunogenetics/history/*organization & administration/trends ; },
}

*Congresses as Topic/organization & administration/standards
Croatia
Europe
History, 21st Century
Humans
Immunogenetics/history/*organization & administration/trends

@article {pmid31368904,
year = {2019},
author = {Neill, US},
title = {A conversation with Lucy Shapiro.},
journal = {The Journal of clinical investigation},
volume = {129},
number = {8},
pages = {2981-2982},
doi = {10.1172/JCI131492},
pmid = {31368904},
issn = {1558-8238},
mesh = {Developmental Biology/*history ; History, 20th Century ; History, 21st Century ; Humans ; Molecular Biology/*history ; },
}

Developmental Biology/*history
History, 20th Century
History, 21st Century
Humans
Molecular Biology/*history

@article {pmid31697016,
year = {2019},
author = {Wolinsky, H},
title = {Ancient DNA and contemporary politics: The analysis of ancient DNA challenges long-held beliefs about identity and history with potential for political abuse.},
journal = {EMBO reports},
volume = {20},
number = {12},
pages = {e49507},
pmid = {31697016},
issn = {1469-3178},
mesh = {Americas ; *DNA, Ancient ; Emigration and Immigration/history ; Europe ; Genetics, Population/history ; History, Ancient ; Human Genetics ; Human Migration/*history ; Humans ; *Politics ; Racism ; },
abstract = {The sequencing and analysis of ancient human DNA has helped to rewrite human history. But it is also tempting politicians, nationalists and supremacists to abuse this research for their agendas.},
}

Americas
*DNA, Ancient
Emigration and Immigration/history
Europe
Genetics, Population/history
History, Ancient
Human Genetics
Human Migration/*history
Humans
*Politics
Racism

@article {pmid30538303,
year = {2019},
author = {Ortega-Del Vecchyo, D and Slatkin, M},
title = {FST between archaic and present-day samples.},
journal = {Heredity},
volume = {122},
number = {6},
pages = {711-718},
pmid = {30538303},
issn = {1365-2540},
support = {R01 GM040282/GM/NIGMS NIH HHS/United States ; },
mesh = {DNA, Ancient/*analysis ; Fossils/history ; Genetics, Population/*history ; *Genome ; History, Ancient ; Models, Genetic ; },
abstract = {The increasing abundance of DNA sequences obtained from fossils calls for new population genetics theory that takes account of both the temporal and spatial separation of samples. Here, we exploit the relationship between Wright's FST and average coalescence times to develop an analytic theory describing how FST depends on both the distance and time separating pairs of sampled genomes. We apply this theory to several simple models of population history. If there is a time series of samples, partial population replacement creates a discontinuity in pairwise FST values. The magnitude of the discontinuity depends on the extent of replacement. In stepping-stone models, pairwise FST values between archaic and present-day samples reflect both the spatial and temporal separation. At long distances, an isolation by distance pattern dominates. At short distances, the time separation dominates. Analytic predictions fit patterns generated by simulations. We illustrate our results with applications to archaic samples from European human populations. We compare present-day samples with a pair of archaic samples taken before and after a replacement event.},
}

DNA, Ancient/*analysis
Fossils/history
Genetics, Population/*history
*Genome
History, Ancient
Models, Genetic

@article {pmid30395331,
year = {2019},
author = {, },
title = {The Gene Ontology Resource: 20 years and still GOing strong.},
journal = {Nucleic acids research},
volume = {47},
number = {D1},
pages = {D330-D338},
pmid = {30395331},
issn = {1362-4962},
support = {U41 HG001315/HG/NHGRI NIH HHS/United States ; R01 GM089636/GM/NIGMS NIH HHS/United States ; U41 HG002273/HG/NHGRI NIH HHS/United States ; U41 HG000330/HG/NHGRI NIH HHS/United States ; RG/13/5/30112/BHF_/British Heart Foundation/United Kingdom ; U41 HG007822/HG/NHGRI NIH HHS/United States ; MR/N030117/1/MRC_/Medical Research Council/United Kingdom ; P41 HG000330/HG/NHGRI NIH HHS/United States ; U41 HG000739/HG/NHGRI NIH HHS/United States ; G-1307/PUK_/Parkinson's UK/United Kingdom ; 104967/WT_/Wellcome Trust/United Kingdom ; },
mesh = {Animals ; Bacteria/genetics ; Eukaryota/genetics ; Gene Ontology/*history/organization & administration/trends ; High-Throughput Screening Assays ; History, 20th Century ; History, 21st Century ; Humans ; Mitogen-Activated Protein Kinases/genetics ; Molecular Sequence Annotation ; Quality Control ; },
abstract = {The Gene Ontology resource (GO; http://geneontology.org) provides structured, computable knowledge regarding the functions of genes and gene products. Founded in 1998, GO has become widely adopted in the life sciences, and its contents are under continual improvement, both in quantity and in quality. Here, we report the major developments of the GO resource during the past two years. Each monthly release of the GO resource is now packaged and given a unique identifier (DOI), enabling GO-based analyses on a specific release to be reproduced in the future. The molecular function ontology has been refactored to better represent the overall activities of gene products, with a focus on transcription regulator activities. Quality assurance efforts have been ramped up to address potentially out-of-date or inaccurate annotations. New evidence codes for high-throughput experiments now enable users to filter out annotations obtained from these sources. GO-CAM, a new framework for representing gene function that is more expressive than standard GO annotations, has been released, and users can now explore the growing repository of these models. We also provide the 'GO ribbon' widget for visualizing GO annotations to a gene; the widget can be easily embedded in any web page.},
}

Animals
Bacteria/genetics
Eukaryota/genetics
Gene Ontology/*history/organization & administration/trends
High-Throughput Screening Assays
History, 20th Century
History, 21st Century
Humans
Mitogen-Activated Protein Kinases/genetics
Molecular Sequence Annotation
Quality Control

@article {pmid31251384,
year = {2019},
author = {Buchan, DWA and Jones, DT},
title = {The PSIPRED Protein Analysis Workbench: 20 years on.},
journal = {Nucleic acids research},
volume = {47},
number = {W1},
pages = {W402-W407},
pmid = {31251384},
issn = {1362-4962},
support = {BB/M011712/1/BB_/Biotechnology and Biological Sciences Research Council/United Kingdom ; },
mesh = {Amino Acid Sequence ; Binding Sites ; Gene Ontology/history/*trends ; History, 21st Century ; Internet ; Models, Molecular ; Molecular Sequence Annotation/history/*methods ; Protein Binding ; Protein Conformation, alpha-Helical ; Protein Conformation, beta-Strand ; Protein Interaction Domains and Motifs ; Proteins/*chemistry/history ; Sequence Alignment ; Sequence Homology, Amino Acid ; Software/*history ; },
abstract = {The PSIPRED Workbench is a web server offering a range of predictive methods to the bioscience community for 20 years. Here, we present the work we have completed to update the PSIPRED Protein Analysis Workbench and make it ready for the next 20 years. The main focus of our recent website upgrade work has been the acceleration of analyses in the face of increasing protein sequence database size. We additionally discuss any new software, the new hardware infrastructure, our webservices and web site. Lastly we survey updates to some of the key predictive algorithms available through our website.},
}

Amino Acid Sequence
Binding Sites
Gene Ontology/history/*trends
History, 21st Century
Internet
Models, Molecular
Molecular Sequence Annotation/history/*methods
Protein Binding
Protein Conformation, alpha-Helical
Protein Conformation, beta-Strand
Protein Interaction Domains and Motifs
Proteins/*chemistry/history
Sequence Alignment
Sequence Homology, Amino Acid
Software/*history

@article {pmid31871165,
year = {2020},
author = {Suran, M},
title = {Finding the tail end: The discovery of RNA splicing.},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {117},
number = {4},
pages = {1829-1832},
pmid = {31871165},
issn = {1091-6490},
mesh = {History, 20th Century ; History, 21st Century ; Humans ; Molecular Biology/*history ; *Nobel Prize ; RNA Splicing/*genetics ; },
}

History, 20th Century
History, 21st Century
Humans
Molecular Biology/*history
*Nobel Prize
RNA Splicing/*genetics

@article {pmid30848958,
year = {2019},
author = {Temtamy, SA},
title = {The Development of Human Genetics at the National Research Centre, Cairo, Egypt: A Story of 50 Years.},
journal = {Annual review of genomics and human genetics},
volume = {20},
number = {},
pages = {1-19},
doi = {10.1146/annurev-genom-083118-015201},
pmid = {30848958},
issn = {1545-293X},
mesh = {Academies and Institutes/*history/organization & administration ; Awards and Prizes ; Egypt ; Hand Deformities, Congenital/genetics/*history ; History, 20th Century ; History, 21st Century ; Human Genetics/*history/organization & administration ; Humans ; International Cooperation ; },
abstract = {This article describes my experiences over more than 50 years in initiating and maintaining research on human genetics and genomics at the National Research Centre in Cairo, Egypt, from its beginnings in a small unit of human genetics to the creation of the Center of Excellence for Human Genetics. This was also the subject of a lecture I gave at the 10th Conference of the African Society of Human Genetics, held in Cairo in November 2017, after which Professor Michèle Ramsay, president of the society, suggested that I write an autobiographical article for the Annual Review of Genomics and Human Genetics. I hope that I succeeded in the difficult assignment of summarizing the efforts of a researcher from a developing country to initiate and maintain the rapidly advancing science of human genetics and genomics in my own country and make contributions to the worldwide scientific community.},
}

Academies and Institutes/*history/organization & administration
Awards and Prizes
Egypt
Hand Deformities, Congenital/genetics/*history
History, 20th Century
History, 21st Century
Human Genetics/*history/organization & administration
Humans
International Cooperation

@article {pmid32094358,
year = {2020},
author = {Marcus, JH and Posth, C and Ringbauer, H and Lai, L and Skeates, R and Sidore, C and Beckett, J and Furtwängler, A and Olivieri, A and Chiang, CWK and Al-Asadi, H and Dey, K and Joseph, TA and Liu, CC and Der Sarkissian, C and Radzevičiūtė, R and Michel, M and Gradoli, MG and Marongiu, P and Rubino, S and Mazzarello, V and Rovina, D and La Fragola, A and Serra, RM and Bandiera, P and Bianucci, R and Pompianu, E and Murgia, C and Guirguis, M and Orquin, RP and Tuross, N and van Dommelen, P and Haak, W and Reich, D and Schlessinger, D and Cucca, F and Krause, J and Novembre, J},
title = {Genetic history from the Middle Neolithic to present on the Mediterranean island of Sardinia.},
journal = {Nature communications},
volume = {11},
number = {1},
pages = {939},
pmid = {32094358},
issn = {2041-1723},
support = {R01 GM132383/GM/NIGMS NIH HHS/United States ; R01 HG007089/HG/NHGRI NIH HHS/United States ; HHSN271201100005C/DA/NIDA NIH HHS/United States ; T32 GM007197/GM/NIGMS NIH HHS/United States ; },
mesh = {Archaeology/methods ; Body Remains ; Chromosomes, Human, X/genetics ; Chromosomes, Human, Y/genetics ; *DNA, Ancient ; DNA, Mitochondrial/*genetics ; Datasets as Topic ; Female ; Genetics, Population/*history ; History, 15th Century ; History, 16th Century ; History, 17th Century ; History, 18th Century ; History, 19th Century ; History, 20th Century ; History, 21st Century ; History, Ancient ; History, Medieval ; *Human Migration ; Humans ; Italy ; Male ; *Models, Genetic ; Sequence Analysis, DNA ; },
abstract = {The island of Sardinia has been of particular interest to geneticists for decades. The current model for Sardinia's genetic history describes the island as harboring a founder population that was established largely from the Neolithic peoples of southern Europe and remained isolated from later Bronze Age expansions on the mainland. To evaluate this model, we generate genome-wide ancient DNA data for 70 individuals from 21 Sardinian archaeological sites spanning the Middle Neolithic through the Medieval period. The earliest individuals show a strong affinity to western Mediterranean Neolithic populations, followed by an extended period of genetic continuity on the island through the Nuragic period (second millennium BCE). Beginning with individuals from Phoenician/Punic sites (first millennium BCE), we observe spatially-varying signals of admixture with sources principally from the eastern and northern Mediterranean. Overall, our analysis sheds light on the genetic history of Sardinia, revealing how relationships to mainland populations shifted over time.},
}

Archaeology/methods
Body Remains
Chromosomes, Human, X/genetics
Chromosomes, Human, Y/genetics
*DNA, Ancient
DNA, Mitochondrial/*genetics
Datasets as Topic
Female
Genetics, Population/*history
History, 15th Century
History, 16th Century
History, 17th Century
History, 18th Century
History, 19th Century
History, 20th Century
History, 21st Century
History, Ancient
History, Medieval
*Human Migration
Humans
Italy
Male
*Models, Genetic
Sequence Analysis, DNA

@article {pmid31101932,
year = {2019},
author = {Aktories, K and Gierschik, P and Heringdorf, DMZ and Schmidt, M and Schultz, G and Wieland, T},
title = {cAMP guided his way: a life for G protein-mediated signal transduction and molecular pharmacology-tribute to Karl H. Jakobs.},
journal = {Naunyn-Schmiedeberg's archives of pharmacology},
volume = {392},
number = {8},
pages = {887-911},
pmid = {31101932},
issn = {1432-1912},
mesh = {Cyclic AMP/*physiology ; GTP-Binding Proteins/*history/*physiology ; History, 20th Century ; History, 21st Century ; Humans ; Molecular Biology/*history ; Signal Transduction/physiology ; },
abstract = {Karl H. Jakobs, former editor-in-chief of Naunyn-Schmiedeberg's Archives of Pharmacology and renowned molecular pharmacologist, passed away in April 2018. In this article, his scientific achievements regarding G protein-mediated signal transduction and regulation of canonical pathways are summarized. Particularly, the discovery of inhibitory G proteins for adenylyl cyclase, methods for the analysis of receptor-G protein interactions, GTP supply by nucleoside diphosphate kinases, mechanisms in phospholipase C and phospholipase D activity regulation, as well as the development of the concept of sphingosine-1-phosphate as extra- and intracellular messenger will presented. His seminal scientific and methodological contributions are put in a general and timely perspective to display and honor his outstanding input to the current knowledge in molecular pharmacology.},
}

Cyclic AMP/*physiology
GTP-Binding Proteins/*history/*physiology
History, 20th Century
History, 21st Century
Humans
Molecular Biology/*history
Signal Transduction/physiology

@article {pmid31240243,
year = {2019},
author = {},
title = {Spotlight On Early Career Researchers: an interview with Lovorka Stojic.},
journal = {Communications biology},
volume = {2},
number = {},
pages = {204},
doi = {10.1038/s42003-019-0466-7},
pmid = {31240243},
issn = {2399-3642},
mesh = {Career Choice ; History, 21st Century ; Humans ; Molecular Biology/history/*methods/*trends ; Neoplasms/*metabolism ; RNA/metabolism ; *RNA, Long Noncoding ; Transcriptome ; },
abstract = {Dr. Lovorka Stojic is a postdoctoral research fellow at the University of Cambridge and will start her own research group at the Barts Cancer Institute this fall. Her research focuses on understanding how long noncoding RNAs and RNA-binding proteins regulate key cellular processes and how dysregulation of these processes can contribute to human diseases such as cancer. As part of our series on early-career researchers, we asked Dr. Stojic to tell us about her research and career path. She also shares her challenges from juggling between multiple roles and advice for job applications.},
}

Career Choice
History, 21st Century
Humans
Molecular Biology/history/*methods/*trends
Neoplasms/*metabolism
RNA/metabolism
*RNA, Long Noncoding
Transcriptome

@article {pmid30942313,
year = {2019},
author = {Barahona, A},
title = {Karyotyping and population genetics in Cold War Mexico: Armendares's and Lisker's characterization of child and indigenous populations, 1960s-1980s.},
journal = {Historia, ciencias, saude--Manguinhos},
volume = {26},
number = {1},
pages = {245-264},
doi = {10.1590/S0104-59702019000100014},
pmid = {30942313},
issn = {1678-4758},
mesh = {Carbohydrate Metabolism, Inborn Errors/history ; Child ; Cytogenetics/history ; Genetics, Population/*history ; Glucosephosphate Dehydrogenase Deficiency/history ; History, 20th Century ; Human Genetics/*history ; Humans ; Indigenous Peoples/genetics/*history ; Karyotyping/history ; Lactase/deficiency/history ; Mexico ; },
abstract = {This paper focuses on geneticists Salvador Armendares's and Rubén Lisker's studies from the 1960s to the 1980s, to explore how their work fits into the post-1945 human biological studies, and also how the populations they studied, child and indigenous, can be considered laboratories of knowledge production. This paper describes how populations were considered for different purposes: scientific inquiry, standardization of medical practices, and production or application of medicines. Through the narrative of the different trajectories and collaborations between Armendares and Lisker, this paper also attempts to show the contact of their scientific practices, which brought cytogenetics and population genetics together at the local and global levels from a transnational perspective.},
}

Carbohydrate Metabolism, Inborn Errors/history
Child
Cytogenetics/history
Genetics, Population/*history
Glucosephosphate Dehydrogenase Deficiency/history
History, 20th Century
Human Genetics/*history
Humans
Indigenous Peoples/genetics/*history
Karyotyping/history
Lactase/deficiency/history
Mexico

@article {pmid30942312,
year = {2019},
author = {Torrens, E},
title = {Biomedical knowledge in Mexico during the Cold War and its impact in pictorial representations of Homo sapiens and racial hierarchies.},
journal = {Historia, ciencias, saude--Manguinhos},
volume = {26},
number = {1},
pages = {219-244},
doi = {10.1590/S0104-59702019000100013},
pmid = {30942312},
issn = {1678-4758},
mesh = {Biological Evolution ; Continental Population Groups/*genetics ; Genetics, Medical/*history ; History, 19th Century ; History, 20th Century ; Humans ; Internationality/history ; Medical Illustration/*history ; Mexico ; Racism/history ; },
abstract = {This paper provides an overview of the state of Mexican genetics and biomedical knowledge during the second half of the twentieth century, as well as its impact on the visual representation of human groups and racial hierarchies, based on social studies of scientific imaging and visualization (SIV) and theoretical concepts and methods. It also addresses the genealogy and shifts of the concept of race and racialization of Mexican bodies, concluding with the novel visual culture that resulted from genetic knowledge merged with the racist phenomenon in the second half of the twentieth century in Mexico.},
}

Biological Evolution
Continental Population Groups/*genetics
Genetics, Medical/*history
History, 19th Century
History, 20th Century
Humans
Internationality/history
Medical Illustration/*history
Mexico
Racism/history

@article {pmid30674562,
year = {2019},
author = {Carrasco, N},
title = {Mentors: Ron Kaback.},
journal = {The Journal of general physiology},
volume = {151},
number = {2},
pages = {97-99},
pmid = {30674562},
issn = {1540-7748},
mesh = {Cell Biology/*history ; History, 20th Century ; History, 21st Century ; Membrane Transport Proteins/metabolism ; Molecular Biology/*history ; },
}

Cell Biology/*history
History, 20th Century
History, 21st Century
Membrane Transport Proteins/metabolism
Molecular Biology/*history

@article {pmid31794267,
year = {2019},
author = {Schüpbach, T},
title = {Genetic Screens to Analyze Pattern Formation of Egg and Embryo in Drosophila: A Personal History.},
journal = {Annual review of genetics},
volume = {53},
number = {},
pages = {1-18},
doi = {10.1146/annurev-genet-112618-043708},
pmid = {31794267},
issn = {1545-2948},
mesh = {Animals ; Body Patterning/genetics ; Drosophila Proteins/genetics/metabolism ; Drosophila melanogaster/*embryology/*genetics ; Embryo, Nonmammalian ; ErbB Receptors/genetics/metabolism ; Female ; Gene Expression Regulation, Developmental ; Genetics/*history ; History, 20th Century ; History, 21st Century ; Male ; Oocytes/physiology ; Ovary/growth & development/physiology ; Ovum/*physiology ; Receptors, Invertebrate Peptide/genetics/metabolism ; Sex Determination Analysis ; Sex Determination Processes ; United States ; },
abstract = {In Drosophila development, the axes of the egg and future embryo are established during oogenesis. To learn about the underlying genetic and molecular pathways that lead to axis formation, I conducted a large-scale genetic screen at the beginning of my independent career. This led to the eventual understanding that both anterior-posterior and dorsal-ventral pattern information is transmitted from the oocyte to the surrounding follicle cells and in turn from the follicle cells back to the oocyte. How I came to conduct this screen and what further insights were gained by studying the mutants isolated in the screen are the topics of this autobiographical article.},
}

Animals
Body Patterning/genetics
Drosophila Proteins/genetics/metabolism
Drosophila melanogaster/*embryology/*genetics
Embryo, Nonmammalian
ErbB Receptors/genetics/metabolism
Female
Gene Expression Regulation, Developmental
Genetics/*history
History, 20th Century
History, 21st Century
Male
Oocytes/physiology
Ovary/growth & development/physiology
Ovum/*physiology
Receptors, Invertebrate Peptide/genetics/metabolism
Sex Determination Analysis
Sex Determination Processes
United States

@article {pmid31650470,
year = {2019},
author = {Veuille, M},
title = {Chance, Variation and Shared Ancestry: Population Genetics After the Synthesis.},
journal = {Journal of the history of biology},
volume = {52},
number = {4},
pages = {537-567},
pmid = {31650470},
issn = {1573-0387},
mesh = {*Biological Evolution ; Genetics, Population/*history ; History, 20th Century ; History, 21st Century ; Models, Biological ; *Selection, Genetic ; },
abstract = {Chance has been a focus of attention ever since the beginning of population genetics, but neutrality has not, as natural selection once appeared to be the only worthwhile issue. Neutral change became a major source of interest during the neutralist-selectionist debate, 1970-1980. It retained interest beyond this period for two reasons that contributed to its becoming foundational for evolutionary reasoning. On the one hand, neutral evolution was the first mathematical prediction to emerge from Mendelian inheritance: until then evolution by natural selection was considered the alternative to the fixity of species; now it appears to be the alternative to continuous change. Second, neutral change generated a set of clear predictions on standing variation. These could be used as a reference for detecting more elusive alternative mechanisms of evolution including natural selection. In the wake of the transition from Mendelism to genomics, the combination of coalescent theory, DNA sequence variation, and numerical analysis made it possible to integrate contingent aspects of the history of species into a new null model, thus opening a new dimension in the concept of population that the Modern Synthesis formerly considered as a mere gene pool.},
}

*Biological Evolution
Genetics, Population/*history
History, 20th Century
History, 21st Century
Models, Biological
*Selection, Genetic

@article {pmid31571023,
year = {2019},
author = {Beatty, J},
title = {The Creativity of Natural Selection? Part II: The Synthesis and Since.},
journal = {Journal of the history of biology},
volume = {52},
number = {4},
pages = {705-731},
pmid = {31571023},
issn = {1573-0387},
mesh = {*Biological Evolution ; Genetics, Population/*history ; History, 19th Century ; History, 20th Century ; *Selection, Genetic ; },
abstract = {This is the second of a two-part essay on the history of debates concerning the creativity of natural selection, from Darwin through the evolutionary synthesis and up to the present. In the first part, I focussed on the mid-late nineteenth century to the early twentieth, with special emphasis on early Darwinism and its critics, the self-styled "mutationists." The second part focuses on the evolutionary synthesis and some of its critics, especially the "neutralists" and "neo-mutationists." Like Stephen Gould, I consider the creativity of natural selection to be a key component of what has traditionally counted as "Darwinism." I argue that the creativity of natural selection is best understood in terms of (1) selection initiating evolutionary change, and (2) selection directing evolutionary change, for example by creating the variation that it subsequently acts upon. I consider the respects in which both of these claims sound non-Darwinian, even though they have long been understood by supporters and critics alike to be virtually constitutive of Darwinism.},
}

*Biological Evolution
Genetics, Population/*history
History, 19th Century
History, 20th Century
*Selection, Genetic

@article {pmid31300940,
year = {2019},
author = {Huneman, P},
title = {How the Modern Synthesis Came to Ecology.},
journal = {Journal of the history of biology},
volume = {52},
number = {4},
pages = {635-686},
pmid = {31300940},
issn = {1573-0387},
support = {Explabio B13 SHS OO7//Agence Nationale de la Recherche/International ; },
mesh = {*Biological Evolution ; Ecology/*history ; Genetics, Population/*history ; History, 20th Century ; Models, Biological ; *Selection, Genetic ; },
abstract = {Ecology in principle is tied to evolution, since communities and ecosystems result from evolution and ecological conditions determine fitness values (and ultimately evolution by natural selection). Yet the two disciplines of evolution and ecology were not unified in the twentieth-century. The architects of the Modern Synthesis, and especially Julian Huxley, constantly pushed for such integration, but the major ideas of the Synthesis-namely, the privileged role of selection and the key role of gene frequencies in evolution-did not directly or immediately translate into ecological science. In this paper I consider five stages through which the Synthesis was integrated into ecology and distinguish between various ways in which a possible integration was gained. I start with Elton's animal ecology (1927), then consider successively Ford's ecological genetics in the 1940s, the major textbook Principles of animal ecology edited by Allee et al. (1949), and the debates over the role of competition in population regulation in the 1950s, ending with Hutchinson's niche concept (1959) and McArthur and Wilson's Principles of Island Biogeography (1967) viewed as a formal transposition of Modern Synthesis explanatory schemes. I will emphasize the key role of founders of the Synthesis at each stage of this very nonlinear history.},
}

*Biological Evolution
Ecology/*history
Genetics, Population/*history
History, 20th Century
Models, Biological
*Selection, Genetic

@article {pmid30689139,
year = {2019},
author = {Grodwohl, JB},
title = {Animal Behavior, Population Biology and the Modern Synthesis (1955-1985).},
journal = {Journal of the history of biology},
volume = {52},
number = {4},
pages = {597-633},
pmid = {30689139},
issn = {1573-0387},
mesh = {Animals ; *Behavior, Animal ; *Biological Evolution ; Ethology/*history ; Genetics, Population/*history ; History, 20th Century ; Models, Biological ; *Selection, Genetic ; Sociobiology/history ; },
abstract = {This paper examines the history of animal behavior studies after the synthesis period. Three episodes are considered: the adoption of the theory of natural selection, the mathematization of ideas, and the spread of molecular methods in behavior studies. In these three episodes, students of behavior adopted practices and standards developed in population ecology and population genetics. While they borrowed tools and methods from these fields, they made distinct uses (inclusive fitness method, evolutionary theory of games, emphasis on individual selection) that set them relatively apart and led them to contribute, in their own way, to evolutionary theory. These episodes also highlight some limitations of "conjunction narratives" centered on the relation between a discipline and the modern synthesis. A trend in conjunction narratives is to interpret any development related to evolution in a discipline as an "extension," an "integration," or as a "delayed" synthesis. I here suggest that this can lead to underestimate discontinuities in the history of evolutionary biology.},
}

Animals
*Behavior, Animal
*Biological Evolution
Ethology/*history
Genetics, Population/*history
History, 20th Century
Models, Biological
*Selection, Genetic
Sociobiology/history

@article {pmid30402778,
year = {2019},
author = {Sepkoski, D},
title = {The Unfinished Synthesis?: Paleontology and Evolutionary Biology in the 20th Century.},
journal = {Journal of the history of biology},
volume = {52},
number = {4},
pages = {687-703},
pmid = {30402778},
issn = {1573-0387},
mesh = {*Biological Evolution ; Genetics, Population/*history ; History, 20th Century ; Paleontology/*history ; *Selection, Genetic ; },
abstract = {In the received view of the history of the Modern Evolutionary Synthesis, paleontology was given a prominent role in evolutionary biology thanks to the significant influence of paleontologist George Gaylord Simpson on both the institutional and conceptual development of the Synthesis. Simpson's 1944 Tempo and Mode in Evolution is considered a classic of Synthesis-era biology, and Simpson often remarked on the influence of other major Synthesis figures - such as Ernst Mayr and Theodosius Dobzhansky - on his developing thought. Why, then, did paleontologists of the 1970s and 1980s - Stephen Jay Gould, Niles Eldredge, David M. Raup, Steven Stanley, and others - so frequently complain that paleontology remained marginalized within evolutionary biology? This essay considers three linked questions: first, were paleontologists genuinely welcomed into the Synthetic project during its initial stages? Second, was the initial promise of the role for paleontology realized during the decades between 1950 and 1980, when the Synthesis supposedly "hardened" to an "orthodoxy"? And third, did the period of organized dissent and opposition to this orthodoxy by paleontologists during the 1970s and 1980s bring about a long-delayed completion to the Modern Synthesis, or rather does it highlight the wider failure of any such unified Darwinian evolutionary consensus?},
}

*Biological Evolution
Genetics, Population/*history
History, 20th Century
Paleontology/*history
*Selection, Genetic

@article {pmid30361838,
year = {2019},
author = {Plutynski, A},
title = {Speciation Post Synthesis: 1960-2000.},
journal = {Journal of the history of biology},
volume = {52},
number = {4},
pages = {569-596},
pmid = {30361838},
issn = {1573-0387},
support = {None//None/International ; },
mesh = {Biological Evolution ; *Genetic Speciation ; Genetics, Population/*history ; History, 20th Century ; Selection, Genetic ; },
abstract = {Speciation-the origin of new species-has been one of the most active areas of research in evolutionary biology, both during, and since the Modern Synthesis. While the Modern Synthesis certainly shaped research on speciation in significant ways, providing a core framework, and set of categories and methods to work with, the history of work on speciation since the mid-twentieth century is a history of divergence and diversification. This piece traces this divergence, through both theoretical advances, and empirical insights into how different lineages, with different genetics and ecological conditions, are shaped by very different modes of diversification.},
}

Biological Evolution
*Genetic Speciation
Genetics, Population/*history
History, 20th Century
Selection, Genetic

@article {pmid31123709,
year = {2019},
author = {Kashuba, N and Kırdök, E and Damlien, H and Manninen, MA and Nordqvist, B and Persson, P and Götherström, A},
title = {Ancient DNA from mastics solidifies connection between material culture and genetics of mesolithic hunter-gatherers in Scandinavia.},
journal = {Communications biology},
volume = {2},
number = {},
pages = {185},
pmid = {31123709},
issn = {2399-3642},
mesh = {Anthropology, Cultural/history ; Betula/chemistry ; Chewing Gum/history ; DNA, Ancient/*isolation & purification ; DNA, Mitochondrial/genetics/history ; Genetics, Population/history ; History, Ancient ; Human Migration/history ; Humans ; Mastic Resin/history ; Resins, Plant/history ; Scandinavian and Nordic Countries ; },
abstract = {Human demography research in grounded on the information derived from ancient DNA and archaeology. For example, the study on the early postglacial dual-route colonisation of the Scandinavian Peninsula is largely based on associating genomic data with the early dispersal of lithic technology from the East European Plain. However, a clear connection between material culture and genetics has been lacking. Here, we demonstrate that direct connection by analysing human DNA from chewed birch bark pitch mastics. These samples were discovered at Huseby Klev in western Sweden, a Mesolithic site with eastern lithic technology. We generated genome-wide data for three individuals, and show their affinity to the Scandinavian hunter-gatherers. Our samples date to 9880-9540 calBP, expanding the temporal range and distribution of the early Scandinavian genetic group. We propose that DNA from ancient mastics can be used to study environment and ecology of prehistoric populations.},
}

Anthropology, Cultural/history
Betula/chemistry
Chewing Gum/history
DNA, Ancient/*isolation & purification
DNA, Mitochondrial/genetics/history
Genetics, Population/history
History, Ancient
Human Migration/history
Humans
Mastic Resin/history
Resins, Plant/history
Scandinavian and Nordic Countries

@article {pmid31744454,
year = {2019},
author = {, },
title = {GSE's 50th anniversary: where do we go from now?.},
journal = {Genetics, selection, evolution : GSE},
volume = {51},
number = {1},
pages = {66},
doi = {10.1186/s12711-019-0504-4},
pmid = {31744454},
issn = {1297-9686},
mesh = {Animals ; Genetics/*history ; Genomics/history ; History, 20th Century ; History, 21st Century ; Periodicals as Topic/*history ; Selection, Genetic ; },
}

Animals
Genetics/*history
Genomics/history
History, 20th Century
History, 21st Century
Periodicals as Topic/*history
Selection, Genetic

@article {pmid31717816,
year = {2019},
author = {Berthel, E and Ferlazzo, ML and Devic, C and Bourguignon, M and Foray, N},
title = {What Does the History of Research on the Repair of DNA Double-Strand Breaks Tell Us?-A Comprehensive Review of Human Radiosensitivity.},
journal = {International journal of molecular sciences},
volume = {20},
number = {21},
pages = {},
pmid = {31717816},
issn = {1422-0067},
support = {INDIRA Project//Commissariat Général à l'Investissement/ ; BERNADOTTE project//Centre National d'Etudes Spatiales/ ; PROUST Project//Institut National Du Cancer/ ; },
mesh = {Animals ; Ataxia Telangiectasia Mutated Proteins/genetics/metabolism ; Biomarkers/metabolism ; Cytogenetics/history ; *DNA Breaks, Double-Stranded ; DNA End-Joining Repair ; DNA Repair/*genetics ; Histones/metabolism ; History, 20th Century ; History, 21st Century ; Humans ; Radiation Tolerance/*genetics ; Radiation, Ionizing ; Research/history ; },
abstract = {Our understanding of the molecular and cellular response to ionizing radiation (IR) has progressed considerably. This is notably the case for the repair and signaling of DNA double-strand breaks (DSB) that, if unrepaired, can result in cell lethality, or if misrepaired, can cause cancer. However, through the different protocols, techniques, and cellular models used during the last four decades, the DSB repair kinetics and the relationship between cellular radiosensitivity and unrepaired DSB has varied drastically, moving from all-or-none phenomena to very complex mechanistic models. To date, personalized medicine has required a reliable evaluation of the IR-induced risks that have become a medical, scientific, and societal issue. However, the molecular bases of the individual response to IR are still unclear: there is a gap between the moderate radiosensitivity frequently observed in clinic but poorly investigated in the publications and the hyper-radiosensitivity of rare but well-characterized genetic diseases frequently cited in the mechanistic models. This paper makes a comprehensive review of semantic issues, correlations between cellular radiosensitivity and unrepaired DSB, shapes of DSB repair curves, and DSB repair biomarkers in order to propose a new vision of the individual response to IR that would be more coherent with clinical reality.},
}

Animals
Ataxia Telangiectasia Mutated Proteins/genetics/metabolism
Biomarkers/metabolism
Cytogenetics/history
*DNA Breaks, Double-Stranded
DNA End-Joining Repair
DNA Repair/*genetics
Histones/metabolism
History, 20th Century
History, 21st Century
Humans
Radiation Tolerance/*genetics
Radiation, Ionizing
Research/history

@article {pmid30382757,
year = {2019},
author = {Roelcke, V},
title = {Eugenic concerns, scientific practices: international relations in the establishment of psychiatric genetics in Germany, Britain, the USA and Scandinavia, c.1910-60.},
journal = {History of psychiatry},
volume = {30},
number = {1},
pages = {19-37},
doi = {10.1177/0957154X18808666},
pmid = {30382757},
issn = {0957-154X},
mesh = {Academies and Institutes/history ; Eugenics/*history ; Genetics/history ; Germany ; History, 20th Century ; Humans ; Internationality/*history ; National Socialism/history ; Psychiatry/*history ; Sweden ; United Kingdom ; United States ; },
abstract = {The article describes the emergence of research programmes, institutions and activities of the early protagonists in the field of psychiatric genetics: Ernst Rüdin in Munich, Eliot Slater in London, Franz Kallmann in New York and Erik Essen-Möller in Lund. During the 1930s and well into the Nazi period, the last three had been research fellows at the German Research Institute for Psychiatry in Munich. It is documented that there was a continuous mutual exchange of scientific ideas and practices between these actors, and that in all four contexts there were intrinsic relations between eugenic motivations and genetic research, but with specific national adaptations.},
}

Academies and Institutes/history
Eugenics/*history
Genetics/history
Germany
History, 20th Century
Humans
Internationality/*history
National Socialism/history
Psychiatry/*history
Sweden
United Kingdom
United States

@article {pmid30350303,
year = {2019},
author = {Xia, Z and Tian, J and Wang, X and Yang, H},
title = {In memory of Prof. C. C. Li.},
journal = {Protein & cell},
volume = {10},
number = {6},
pages = {389-392},
pmid = {30350303},
issn = {1674-8018},
mesh = {China ; Genetics/*history ; History, 20th Century ; United States ; },
}

China
Genetics/*history
History, 20th Century
United States

@article {pmid32186642,
year = {2019},
author = {Miranda C, M and Alamos, MF},
title = {[The influence of medicine in Emile Zola's "Fortune of the Rougon-Macquart"].},
journal = {Revista medica de Chile},
volume = {147},
number = {10},
pages = {1329-1334},
doi = {10.4067/s0034-98872019001001329},
pmid = {32186642},
issn = {0717-6163},
mesh = {France ; Genetic Diseases, Inborn/history ; Genetics/history ; History, 19th Century ; History, 20th Century ; Medicine in Literature/*history ; },
abstract = {Emile Zola is one of the greatest writers in universal literature. In his important series of novels called "The Fortune of the Rougon-Macquart", Zola shows a surprising medical knowledge even though he did not have a formal medical education. We highlight not only his outstanding literary talent, but also the scientific relevance of the tremendous contribution to the medical field that can be extracted from his work. In this series, which describe the history of five generations within a large family suffering from neuropsychiatric and general pathologies, Zola emphasizes the hereditary component of several diseases. These observations probably place him as the first novelist who made an explicit emphasis on the power of inheritance in human behavior. He also mentions for the first time several medical aspects that were seldom addressed in the scientific literature of the time, demonstrating the genius of the writer, his outstanding power of observation and the rigorous preparation with which he wrote his work.},
}

France
Genetic Diseases, Inborn/history
Genetics/history
History, 19th Century
History, 20th Century
Medicine in Literature/*history

@article {pmid31247683,
year = {2019},
author = {Hickey, J and Hill, WG and Blasco, A and Cameron, N and Cullis, B and McGuirk, B and Mäntysaari, E and Ruane, J and Simm, G and Veerkamp, R and Visscher, PM and Wray, NR},
title = {Students', colleagues' and research partners' experience about work and accomplishments from collaborating with Robin Thompson.},
journal = {Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie},
volume = {136},
number = {4},
pages = {301-309},
doi = {10.1111/jbg.12418},
pmid = {31247683},
issn = {1439-0388},
mesh = {Genetics/*history ; History, 20th Century ; History, 21st Century ; Intersectoral Collaboration ; *Research ; Statistics as Topic/*history ; *Students ; },
}

Genetics/*history
History, 20th Century
History, 21st Century
Intersectoral Collaboration
*Research
Statistics as Topic/*history
*Students

@article {pmid32199506,
year = {2020},
author = {Kirby, T},
title = {Barbara Franke-unravelling ADHD's biology.},
journal = {The lancet. Psychiatry},
volume = {7},
number = {4},
pages = {310},
doi = {10.1016/S2215-0366(20)30104-8},
pmid = {32199506},
issn = {2215-0374},
mesh = {Attention Deficit Disorder with Hyperactivity/*genetics ; History, 20th Century ; History, 21st Century ; Molecular Biology/*history ; Netherlands ; Psychiatry/*history ; },
}

Attention Deficit Disorder with Hyperactivity/*genetics
History, 20th Century
History, 21st Century
Molecular Biology/*history
Netherlands
Psychiatry/*history

@article {pmid31594846,
year = {2019},
author = {Cox, SL and Ruff, CB and Maier, RM and Mathieson, I},
title = {Genetic contributions to variation in human stature in prehistoric Europe.},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {116},
number = {43},
pages = {21484-21492},
pmid = {31594846},
issn = {1091-6490},
support = {R35 GM133708/GM/NIGMS NIH HHS/United States ; },
mesh = {*Body Height ; DNA, Ancient/*chemistry ; Europe ; European Continental Ancestry Group/*genetics/*history ; *Genetic Variation ; Genetics, Population/history ; History, Ancient ; Human Genetics/*history ; Humans ; Paleontology ; Phenotype ; Polymorphism, Single Nucleotide ; },
abstract = {The relative contributions of genetics and environment to temporal and geographic variation in human height remain largely unknown. Ancient DNA has identified changes in genetic ancestry over time, but it is not clear whether those changes in ancestry are associated with changes in height. Here, we directly test whether changes over the past 38,000 y in European height predicted using DNA from 1,071 ancient individuals are consistent with changes observed in 1,159 skeletal remains from comparable populations. We show that the observed decrease in height between the Early Upper Paleolithic and the Mesolithic is qualitatively predicted by genetics. Similarly, both skeletal and genetic height remained constant between the Mesolithic and Neolithic and increased between the Neolithic and Bronze Age. Sitting height changes much less than standing height-consistent with genetic predictions-although genetics predicts a small post-Neolithic increase that is not observed in skeletal remains. Geographic variation in stature is also qualitatively consistent with genetic predictions, particularly with respect to latitude. Finally, we hypothesize that an observed decrease in genetic heel bone mineral density in the Neolithic reflects adaptation to the decreased mobility indicated by decreased femoral bending strength. This study provides a model for interpreting phenotypic changes predicted from ancient DNA and demonstrates how they can be combined with phenotypic measurements to understand the relative contribution of genetic and developmentally plastic responses to environmental change.},
}

*Body Height
DNA, Ancient/*chemistry
Europe
European Continental Ancestry Group/*genetics/*history
*Genetic Variation
Genetics, Population/history
History, Ancient
Human Genetics/*history
Humans
Paleontology
Phenotype
Polymorphism, Single Nucleotide

@article {pmid31358638,
year = {2019},
author = {Azar, B},
title = {QnAs with David Reich.},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {116},
number = {32},
pages = {15752-15753},
pmid = {31358638},
issn = {1091-6490},
mesh = {Genetics/*history ; History, 20th Century ; History, 21st Century ; Humans ; Paleontology/*history ; },
}

Genetics/*history
History, 20th Century
History, 21st Century
Humans
Paleontology/*history

@article {pmid31050142,
year = {2019},
author = {Wasant, P and Padilla, C and Lam, S and Thong, MK and Lai, PS},
title = {Asia Pacific Society of Human Genetics (APSHG) from conception to 2019: 13 years of collaboration to tackle congenital malformation and genetic disorders in Asia.},
journal = {American journal of medical genetics. Part C, Seminars in medical genetics},
volume = {181},
number = {2},
pages = {155-165},
doi = {10.1002/ajmg.c.31701},
pmid = {31050142},
issn = {1552-4876},
mesh = {Asia ; Biomedical Research ; *Genetic Diseases, Inborn ; History, 20th Century ; History, 21st Century ; Human Genetics/history/methods/*organization & administration/trends ; Humans ; *Intersectoral Collaboration ; Societies, Medical/*history ; },
abstract = {Putting together the reports in this issue that come from a representation of the different countries in Asia presents an opportunity to share the unique story of the Asia Pacific Society of Human Genetics (APSHG), which has provided the authors of many of these articles. This paper, authored by the Past Presidents of the Society, shares glimpses of how medical genetics activities were first organized in the Asia Pacific region and provides interesting corollaries on how under-developed and developing countries in this part of the world had developed a unique network for exchange and sharing of expertise and resources. Although APSHG was formally registered as a Society in Singapore in 2006, the Society has its origins as far back as in the 1990s with members from different countries meeting informally, exchanging ideas, and collaborating. This treatise documents the story of the experiences of the Society and hopes it will provide inspiration on how members of a genetics community can foster and build a thriving environment to promote this field.},
}

Asia
Biomedical Research
*Genetic Diseases, Inborn
History, 20th Century
History, 21st Century
Human Genetics/history/methods/*organization & administration/trends
Humans
*Intersectoral Collaboration
Societies, Medical/*history

@article {pmid30986087,
year = {2019},
author = {Dobson, CM},
title = {Biophysical Techniques in Structural Biology.},
journal = {Annual review of biochemistry},
volume = {88},
number = {},
pages = {25-33},
doi = {10.1146/annurev-biochem-013118-111947},
pmid = {30986087},
issn = {1545-4509},
mesh = {Chemistry, Analytic/history ; Cryoelectron Microscopy/history/instrumentation/*methods ; Crystallography, X-Ray/history/instrumentation/*methods ; History, 20th Century ; History, 21st Century ; Humans ; Lasers/history ; Magnetic Resonance Spectroscopy/history/instrumentation/*methods ; Mass Spectrometry/history/instrumentation/*methods ; Molecular Biology/history/instrumentation/*methods ; Nucleic Acids/chemistry/ultrastructure ; Proteins/chemistry/ultrastructure ; },
abstract = {Over the past six decades, steadily increasing progress in the application of the principles and techniques of the physical sciences to the study of biological systems has led to remarkable insights into the molecular basis of life. Of particular significance has been the way in which the determination of the structures and dynamical properties of proteins and nucleic acids has so often led directly to a profound understanding of the nature and mechanism of their functional roles. The increasing number and power of experimental and theoretical techniques that can be applied successfully to living systems is now ushering in a new era of structural biology that is leading to fundamentally new information about the maintenance of health, the origins of disease, and the development of effective strategies for therapeutic intervention. This article provides a brief overview of some of the most powerful biophysical methods in use today, along with references that provide more detailed information about recent applications of each of them. In addition, this article acts as an introduction to four authoritative reviews in this volume. The first shows the ways that a multiplicity of biophysical methods can be combined with computational techniques to define the architectures of complex biological systems, such as those involving weak interactions within ensembles of molecular components. The second illustrates one aspect of this general approach by describing how recent advances in mass spectrometry, particularly in combination with other techniques, can generate fundamentally new insights into the properties of membrane proteins and their functional interactions with lipid molecules. The third reviewdemonstrates the increasing power of rapidly evolving diffraction techniques, employing the very short bursts of X-rays of extremely high intensity that are now accessible as a result of the construction of free-electron lasers, in particular to carry out time-resolved studies of biochemical reactions. The fourth describes in detail the application of such approaches to probe the mechanism of the light-induced changes associated with bacteriorhodopsin's ability to convert light energy into chemical energy.},
}

Chemistry, Analytic/history
Cryoelectron Microscopy/history/instrumentation/*methods
Crystallography, X-Ray/history/instrumentation/*methods
History, 20th Century
History, 21st Century
Humans
Lasers/history
Magnetic Resonance Spectroscopy/history/instrumentation/*methods
Mass Spectrometry/history/instrumentation/*methods
Molecular Biology/history/instrumentation/*methods
Nucleic Acids/chemistry/ultrastructure
Proteins/chemistry/ultrastructure

@article {pmid32020465,
year = {2019},
author = {Hunter, DJ},
title = {Adventures in the environment and genes.},
journal = {European journal of epidemiology},
volume = {34},
number = {12},
pages = {1111-1117},
pmid = {32020465},
issn = {1573-7284},
mesh = {*Gene-Environment Interaction ; Genotype ; History, 20th Century ; History, 21st Century ; Humans ; Molecular Epidemiology/*history ; },
}

*Gene-Environment Interaction
Genotype
History, 20th Century
History, 21st Century
Humans
Molecular Epidemiology/*history

@article {pmid31389364,
year = {2019},
author = {Peterson, A},
title = {On Reconstruction of ancestral footfalls in South Asia using genomic data By Saikat Chakraborty and Analabha Basu.},
journal = {Journal of biosciences},
volume = {44},
number = {3},
pages = {},
pmid = {31389364},
issn = {0973-7138},
mesh = {African Continental Ancestry Group/*history ; Archaeology/methods ; Asia/ethnology ; Asian Continental Ancestry Group/*history ; Chromosomes, Human, Y/chemistry ; Culture ; DNA, Ancient/analysis ; DNA, Mitochondrial/genetics ; European Continental Ancestry Group/*history ; Female ; Genetics, Population/*history ; *Genome, Human ; Haplotypes ; History, Ancient ; Human Migration/*history ; Humans ; Linguistics/*history ; Male ; Sequence Analysis, DNA ; },
}

African Continental Ancestry Group/*history
Archaeology/methods
Asia/ethnology
Asian Continental Ancestry Group/*history
Chromosomes, Human, Y/chemistry
Culture
DNA, Ancient/analysis
DNA, Mitochondrial/genetics
European Continental Ancestry Group/*history
Female
Genetics, Population/*history
*Genome, Human
Haplotypes
History, Ancient
Human Migration/*history
Humans
Linguistics/*history
Male
Sequence Analysis, DNA

@article {pmid31389362,
year = {2019},
author = {Pitchappan, R},
title = {On Historic migration to South Asia in the last two millennia: A case of Jewish and Parsi populations By Ajai Kumar Pathak, et al.},
journal = {Journal of biosciences},
volume = {44},
number = {3},
pages = {},
pmid = {31389362},
issn = {0973-7138},
mesh = {Archaeology/methods ; Asian Continental Ancestry Group/*history ; Culture ; DNA, Ancient/analysis ; Female ; Genetics, Population/*history ; *Genome, Human ; History, Ancient ; Human Migration/*history ; Humans ; India/ethnology ; Jews/*history ; Linguistics/*history ; Male ; Middle East/ethnology ; Sequence Analysis, DNA ; },
}

Archaeology/methods
Asian Continental Ancestry Group/*history
Culture
DNA, Ancient/analysis
Female
Genetics, Population/*history
*Genome, Human
History, Ancient
Human Migration/*history
Humans
India/ethnology
Jews/*history
Linguistics/*history
Male
Middle East/ethnology
Sequence Analysis, DNA

@article {pmid31389358,
year = {2019},
author = {Silva, M and Koch, JT and Pala, M and Edwards, CJ and Soares, P and Richards, MB},
title = {On Methodological issues in the Indo-European debate By Michel Danino.},
journal = {Journal of biosciences},
volume = {44},
number = {3},
pages = {},
pmid = {31389358},
issn = {0973-7138},
mesh = {Archaeology/methods ; Asian Continental Ancestry Group/*history ; Culture ; DNA, Ancient/analysis ; Europe/ethnology ; European Continental Ancestry Group/*history ; Genetics, Population/*history ; History, Ancient ; Human Migration/*history ; Humans ; India/ethnology ; Linguistics/*history ; Sequence Analysis, DNA ; },
}

Archaeology/methods
Asian Continental Ancestry Group/*history
Culture
DNA, Ancient/analysis
Europe/ethnology
European Continental Ancestry Group/*history
Genetics, Population/*history
History, Ancient
Human Migration/*history
Humans
India/ethnology
Linguistics/*history
Sequence Analysis, DNA

@article {pmid31585632,
year = {2019},
author = {Marnett, LJ},
title = {Adventures with Bruce Ames and the Ames test.},
journal = {Mutation research},
volume = {846},
number = {},
pages = {403070},
pmid = {31585632},
issn = {1873-135X},
support = {R01 CA087819/CA/NCI NIH HHS/United States ; },
mesh = {Activation, Metabolic ; Animals ; Biochemistry/*history ; California ; Genetics/*history ; History, 20th Century ; History, 21st Century ; Microsomes, Liver/enzymology ; Molecular Structure ; Mutagenesis ; Mutagenicity Tests/*history/methods ; Mutagens/toxicity ; Rats ; Rats, Sprague-Dawley ; Salmonella/drug effects/genetics ; },
abstract = {Bruce Ames has had an enormous impact on human health by developing facile methods for the identification of mutagens. This research also provided important insights into the relationship between mutagenesis and carcinogenesis. Bruce is a highly innovative and creative individual who has followed his interests across disciplines into diverse fields of inquiry. The present author had the pleasure of spending a sabbatical in the Ames lab and utilized the Ames test in multiple aspects of his research. He describes both in this honorific to Bruce on the occasion of his 90th birthday.},
}

Activation, Metabolic
Animals
Biochemistry/*history
California
Genetics/*history
History, 20th Century
History, 21st Century
Microsomes, Liver/enzymology
Molecular Structure
Mutagenesis
Mutagenicity Tests/*history/methods
Mutagens/toxicity
Rats
Rats, Sprague-Dawley
Salmonella/drug effects/genetics

@article {pmid31344306,
year = {2019},
author = {Ekong, R},
title = {In Memoriam: Emeritus Professor Sue (Margaret Susan) Povey [1942-2019].},
journal = {Human mutation},
volume = {40},
number = {10},
pages = {1627-1629},
doi = {10.1002/humu.23766},
pmid = {31344306},
issn = {1098-1004},
mesh = {*Famous Persons ; History, 20th Century ; History, 21st Century ; *Human Genetics/history ; Humans ; United Kingdom ; },
}

*Famous Persons
History, 20th Century
History, 21st Century
*Human Genetics/history
Humans
United Kingdom

@article {pmid31371815,
year = {2019},
author = {Berger, F},
title = {Emil Heitz, a true epigenetics pioneer.},
journal = {Nature reviews. Molecular cell biology},
volume = {20},
number = {10},
pages = {572},
doi = {10.1038/s41580-019-0161-z},
pmid = {31371815},
issn = {1471-0080},
mesh = {Animals ; *Epigenesis, Genetic ; Epigenomics/*history ; Heterochromatin/genetics ; History, 20th Century ; Humans ; Plants/genetics ; Polytene Chromosomes/genetics ; },
}

Animals
*Epigenesis, Genetic
Epigenomics/*history
Heterochromatin/genetics
History, 20th Century
Humans
Plants/genetics
Polytene Chromosomes/genetics

@article {pmid31399826,
year = {2019},
author = {Mariscal, C and Barahona, A and Aubert-Kato, N and Aydinoglu, AU and Bartlett, S and Cárdenas, ML and Chandru, K and Cleland, C and Cocanougher, BT and Comfort, N and Cornish-Bowden, A and Deacon, T and Froese, T and Giovannelli, D and Hernlund, J and Hut, P and Kimura, J and Maurel, MC and Merino, N and Moreno, A and Nakagawa, M and Peretó, J and Virgo, N and Witkowski, O and James Cleaves, H},
title = {Hidden Concepts in the History and Philosophy of Origins-of-Life Studies: a Workshop Report.},
journal = {Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life},
volume = {49},
number = {3},
pages = {111-145},
pmid = {31399826},
issn = {1573-0875},
support = {ELSI Origins Network//John Templeton Foundation/ ; },
mesh = {Biology/*history ; Chemistry/*history ; *Historiography ; History, 16th Century ; History, 17th Century ; History, 18th Century ; History, 19th Century ; History, 20th Century ; History, 21st Century ; Informatics/*history ; Molecular Biology/history ; *Origin of Life ; Paleontology/*history ; Philosophy/*history ; },
abstract = {In this review, we describe some of the central philosophical issues facing origins-of-life research and provide a targeted history of the developments that have led to the multidisciplinary field of origins-of-life studies. We outline these issues and developments to guide researchers and students from all fields. With respect to philosophy, we provide brief summaries of debates with respect to (1) definitions (or theories) of life, what life is and how research should be conducted in the absence of an accepted theory of life, (2) the distinctions between synthetic, historical, and universal projects in origins-of-life studies, issues with strategies for inferring the origins of life, such as (3) the nature of the first living entities (the "bottom up" approach) and (4) how to infer the nature of the last universal common ancestor (the "top down" approach), and (5) the status of origins of life as a science. Each of these debates influences the others. Although there are clusters of researchers that agree on some answers to these issues, each of these debates is still open. With respect to history, we outline several independent paths that have led to some of the approaches now prevalent in origins-of-life studies. These include one path from early views of life through the scientific revolutions brought about by Linnaeus (von Linn.), Wöhler, Miller, and others. In this approach, new theories, tools, and evidence guide new thoughts about the nature of life and its origin. We also describe another family of paths motivated by a" circularity" approach to life, which is guided by such thinkers as Maturana & Varela, Gánti, Rosen, and others. These views echo ideas developed by Kant and Aristotle, though they do so using modern science in ways that produce exciting avenues of investigation. By exploring the history of these ideas, we can see how many of the issues that currently interest us have been guided by the contexts in which the ideas were developed. The disciplinary backgrounds of each of these scholars has influenced the questions they sought to answer, the experiments they envisioned, and the kinds of data they collected. We conclude by encouraging scientists and scholars in the humanities and social sciences to explore ways in which they can interact to provide a deeper understanding of the conceptual assumptions, structure, and history of origins-of-life research. This may be useful to help frame future research agendas and bring awareness to the multifaceted issues facing this challenging scientific question.},
}

Biology/*history
Chemistry/*history
*Historiography
History, 16th Century
History, 17th Century
History, 18th Century
History, 19th Century
History, 20th Century
History, 21st Century
Informatics/*history
Molecular Biology/history
*Origin of Life
Paleontology/*history
Philosophy/*history

@article {pmid29696587,
year = {2019},
author = {Fu, L},
title = {Chia-Chen Tan and genetics in modern China.},
journal = {Protein & cell},
volume = {10},
number = {5},
pages = {313-314},
doi = {10.1007/s13238-018-0539-2},
pmid = {29696587},
issn = {1674-8018},
mesh = {China ; Genetics/*education/*history ; History, 20th Century ; },
}

China
Genetics/*education/*history
History, 20th Century

@article {pmid31611500,
year = {2019},
author = {Sakaki, Y},
title = {A Japanese history of the Human Genome Project.},
journal = {Proceedings of the Japan Academy. Series B, Physical and biological sciences},
volume = {95},
number = {8},
pages = {441-458},
pmid = {31611500},
issn = {1349-2896},
mesh = {History, 20th Century ; History, 21st Century ; Human Genome Project/*history ; Humans ; Japan ; },
abstract = {The Human Genome Project (HGP) is one of the most important international achievements in life sciences, to which Japanese scientists made remarkable contributions. In the early 1980s, Akiyoshi Wada pioneered the first project for the automation of DNA sequencing technology. Ken-ichi Matsubara exhibited exceptional leadership to launch the comprehensive human genome program in Japan. Hideki Kambara made a major contribution by developing a key device for high-speed DNA sequencers, which enabled scientists to construct human genome draft sequences. The RIKEN team led by Yoshiyuki Sakaki (the author) played remarkable roles in the draft sequencing and completion of chromosomes 21, 18, and 11. Additionally, the Keio University team led by Nobuyoshi Shimizu made noteworthy contributions to the completion of chromosomes 22, 21, and 8. In April 2003, the Japanese team joined the international consortium in declaring the completion of the human genome sequence. Consistent with the HGP mandate, Japan has successfully developed a wide range of ambitious genomic sciences.},
}

History, 20th Century
History, 21st Century
Human Genome Project/*history
Humans
Japan

@article {pmid30901553,
year = {2019},
author = {Lupski, JR},
title = {A Human in Human Genetics.},
journal = {Cell},
volume = {177},
number = {1},
pages = {9-15},
doi = {10.1016/j.cell.2019.02.034},
pmid = {30901553},
issn = {1097-4172},
mesh = {Genetics/*history ; History, 20th Century ; History, 21st Century ; Humans ; Male ; },
}

Genetics/*history
History, 20th Century
History, 21st Century
Humans
Male

@article {pmid31451807,
year = {2019},
author = {},
title = {Five decades of eukaryotic transcription.},
journal = {Nature structural & molecular biology},
volume = {26},
number = {9},
pages = {757},
doi = {10.1038/s41594-019-0303-1},
pmid = {31451807},
issn = {1545-9985},
mesh = {DNA-Directed RNA Polymerases/*genetics/*metabolism ; Eukaryota/*genetics/*metabolism ; History, 20th Century ; History, 21st Century ; Molecular Biology/*history ; *Transcription, Genetic ; },
}

DNA-Directed RNA Polymerases/*genetics/*metabolism
Eukaryota/*genetics/*metabolism
History, 20th Century
History, 21st Century
Molecular Biology/*history
*Transcription, Genetic

@article {pmid31439942,
year = {2019},
author = {Lis, JT},
title = {A 50 year history of technologies that drove discovery in eukaryotic transcription regulation.},
journal = {Nature structural & molecular biology},
volume = {26},
number = {9},
pages = {777-782},
doi = {10.1038/s41594-019-0288-9},
pmid = {31439942},
issn = {1545-9985},
support = {R01 GM025232/GM/NIGMS NIH HHS/United States ; },
mesh = {Biochemistry/*history/*methods ; Eukaryota/*enzymology/*genetics ; History, 20th Century ; History, 21st Century ; Molecular Biology/*history/*methods ; *Transcription, Genetic ; },
abstract = {Transcription regulation is critical to organism development and homeostasis. Control of expression of the 20,000 genes in human cells requires many hundreds of proteins acting through sophisticated multistep mechanisms. In this Historical Perspective, I highlight the progress that has been made in elucidating eukaryotic transcriptional mechanisms through an array of disciplines and approaches, and how this concerted effort has been driven by the development of new technologies.},
}

Biochemistry/*history/*methods
Eukaryota/*enzymology/*genetics
History, 20th Century
History, 21st Century
Molecular Biology/*history/*methods
*Transcription, Genetic

@article {pmid31439941,
year = {2019},
author = {Roeder, RG},
title = {50+ years of eukaryotic transcription: an expanding universe of factors and mechanisms.},
journal = {Nature structural & molecular biology},
volume = {26},
number = {9},
pages = {783-791},
pmid = {31439941},
issn = {1545-9985},
support = {R01 CA178765/CA/NCI NIH HHS/United States ; R01 CA234575/CA/NCI NIH HHS/United States ; R01 DK071900/DK/NIDDK NIH HHS/United States ; R01 CA202245/CA/NCI NIH HHS/United States ; R01 CA204639/CA/NCI NIH HHS/United States ; R01 CA129325/CA/NCI NIH HHS/United States ; R01 CA163086/CA/NCI NIH HHS/United States ; },
mesh = {Biochemistry/*history ; Eukaryota/*enzymology/*genetics ; History, 20th Century ; History, 21st Century ; Molecular Biology/*history ; Transcription Factors/*isolation & purification/*metabolism ; *Transcription, Genetic ; },
abstract = {The landmark 1969 discovery of nuclear RNA polymerases I, II and III in diverse eukaryotes represented a major turning point in the field that, with subsequent elucidation of the distinct structures and functions of these enzymes, catalyzed an avalanche of further studies. In this Review, written from a personal and historical perspective, I highlight foundational biochemical studies that led to the discovery of an expanding universe of the components of the transcriptional and regulatory machineries, and a parallel complexity in gene-specific mechanisms that continue to be explored to the present day.},
}

Biochemistry/*history
Eukaryota/*enzymology/*genetics
History, 20th Century
History, 21st Century
Molecular Biology/*history
Transcription Factors/*isolation & purification/*metabolism
*Transcription, Genetic

@article {pmid31439940,
year = {2019},
author = {Conaway, RC and Conaway, JW},
title = {The hunt for RNA polymerase II elongation factors: a historical perspective.},
journal = {Nature structural & molecular biology},
volume = {26},
number = {9},
pages = {771-776},
doi = {10.1038/s41594-019-0283-1},
pmid = {31439940},
issn = {1545-9985},
mesh = {Biochemistry/*history ; Eukaryota/*enzymology ; History, 20th Century ; History, 21st Century ; Molecular Biology/*history ; RNA Polymerase II/*metabolism ; *Transcription, Genetic ; Transcriptional Elongation Factors/*isolation & purification/*metabolism ; },
abstract = {The discovery of the three eukaryotic nuclear RNA polymerases paved the way for serious biochemical investigations of eukaryotic transcription and the identification of eukaryotic transcription factors. Here we describe this adventure from our vantage point, with a focus on the hunt for factors that regulate elongation by RNA polymerase II.},
}

Biochemistry/*history
Eukaryota/*enzymology
History, 20th Century
History, 21st Century
Molecular Biology/*history
RNA Polymerase II/*metabolism
*Transcription, Genetic
Transcriptional Elongation Factors/*isolation & purification/*metabolism

@article {pmid31439939,
year = {2019},
author = {Kadonaga, JT},
title = {The transformation of the DNA template in RNA polymerase II transcription: a historical perspective.},
journal = {Nature structural & molecular biology},
volume = {26},
number = {9},
pages = {766-770},
doi = {10.1038/s41594-019-0278-y},
pmid = {31439939},
issn = {1545-9985},
support = {R35 GM118060/GM/NIGMS NIH HHS/United States ; },
mesh = {Biochemistry/*history ; DNA/*metabolism ; History, 20th Century ; History, 21st Century ; Molecular Biology/*history ; RNA Polymerase II/*metabolism ; RNA, Messenger/*biosynthesis ; *Transcription, Genetic ; },
abstract = {The discovery of RNA polymerases I, II, and III opened up a new era in gene expression. Here I provide a personal retrospective account of the transformation of the DNA template, as it evolved from naked DNA to chromatin, in the biochemical analysis of transcription by RNA polymerase II. These studies have revealed new insights into the mechanisms by which transcription factors function with chromatin to regulate gene expression.},
}

Biochemistry/*history
DNA/*metabolism
History, 20th Century
History, 21st Century
Molecular Biology/*history
RNA Polymerase II/*metabolism
RNA, Messenger/*biosynthesis
*Transcription, Genetic

@article {pmid31488591,
year = {2019},
author = {Heitman, J},
title = {E Pluribus Unum: The Fungal Kingdom as a Rosetta Stone for Biology and Medicine.},
journal = {Genetics},
volume = {213},
number = {1},
pages = {1-7},
pmid = {31488591},
issn = {1943-2631},
support = {R01 AI039115/AI/NIAID NIH HHS/United States ; R01 AI050113/AI/NIAID NIH HHS/United States ; R37 AI039115/AI/NIAID NIH HHS/United States ; T32 AI052080/AI/NIAID NIH HHS/United States ; /HHMI/Howard Hughes Medical Institute/United States ; },
mesh = {Cryptococcus/*genetics/pathogenicity ; Genes, Mating Type, Fungal ; Genetics/*history ; *Genome, Fungal ; History, 20th Century ; History, 21st Century ; },
abstract = {THE Genetics Society of America's (GSA's) Edward Novitski Prize recognizes a single experimental accomplishment or a body of work in which an exceptional level of creativity, and intellectual ingenuity, has been used to design and execute scientific experiments to solve a difficult problem in genetics. The 2019 recipient is Joseph Heitman, who is recognized for his work on fungal pathogens of humans and for ingenious experiments using yeast to identify the molecular targets of widely used immunosuppressive drugs. The latter work, part of Heitman's postdoctoral research, proved to be a seminal contribution to the discovery of the conserved Target of Rapamycin (TOR) pathway. In his own research group, a recurring theme has been the linking of fundamental insights in fungal biology to medically important problems. His studies have included defining fungal mating-type loci, including their evolution and links to virulence, and illustrating convergent transitions from outcrossing to inbreeding in fungal pathogens of plants and animals. He has led efforts to establish new genetic and genomic methods for studying pathogenesis in Cryptococcus species. Heitman's group also discovered unisexual reproduction, a novel mode of fungal reproduction with implications for pathogen evolution and the origins of sexual reproduction.},
}

Cryptococcus/*genetics/pathogenicity
Genes, Mating Type, Fungal
Genetics/*history
*Genome, Fungal
History, 20th Century
History, 21st Century

@article {pmid30657894,
year = {2019},
author = {Kumar, TR},
title = {An interview with Dr Richard Behringer.},
journal = {Biology of reproduction},
volume = {100},
number = {1},
pages = {8-10},
doi = {10.1093/biolre/ioy189},
pmid = {30657894},
issn = {1529-7268},
mesh = {Animals ; Anti-Mullerian Hormone/analysis/genetics ; *Biology/history ; *Genetics/history ; History, 20th Century ; History, 21st Century ; Humans ; *Laboratory Personnel/history ; Mice ; Receptors, Steroid/genetics ; Reproduction/genetics/physiology ; Texas ; },
}

Animals
Anti-Mullerian Hormone/analysis/genetics
*Biology/history
*Genetics/history
History, 20th Century
History, 21st Century
Humans
*Laboratory Personnel/history
Mice
Receptors, Steroid/genetics
Reproduction/genetics/physiology
Texas